RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 COG3Q96JB2 828 aa8.86□□□□□ -0.99
NPAS3-207ENST00000549770 WNK3Q9BYP7 1800 aa8.86□□□□□ -0.99
NPAS3-207ENST00000549770 BLMP54132 1417 aaPredicted RBP8.86□□□□□ -0.99
NPAS3-207ENST00000549770 LRRC37A3O60309 1634 aa8.85□□□□□ -0.99
NPAS3-207ENST00000549770 PDE3BQ13370 1112 aa8.85□□□□□ -0.99
NPAS3-207ENST00000549770 SF3B2Q13435 895 aaKnown RBP8.85□□□□□ -0.99
NPAS3-207ENST00000549770 BARGINQ6ZT62 677 aa8.85□□□□□ -0.99
NPAS3-207ENST00000549770 PAXIP1Q6ZW49 1069 aaPredicted RBP8.85□□□□□ -0.99
NPAS3-207ENST00000549770 LTV1Q96GA3 475 aaPredicted RBP8.85□□□□□ -0.99
NPAS3-207ENST00000549770 PARP4Q9UKK3 1724 aaKnown RBP8.85□□□□□ -0.99
NPAS3-207ENST00000549770 FYB1O15117 783 aa8.84□□□□□ -0.99
NPAS3-207ENST00000549770 RRS1Q15050 365 aaKnown RBP8.84□□□□□ -0.99
NPAS3-207ENST00000549770 CCDC125Q86Z20 511 aa8.84□□□□□ -0.99
NPAS3-207ENST00000549770 CFAP44Q96MT7 982 aa8.84□□□□□ -0.99
NPAS3-207ENST00000549770 CARD14Q9BXL6 1004 aa8.84□□□□□ -0.99
NPAS3-207ENST00000549770 NSD3Q9BZ95 1437 aa8.84□□□□□ -0.99
NPAS3-207ENST00000549770 NLRP2Q9NX02 1062 aa8.84□□□□□ -0.99
NPAS3-207ENST00000549770 ABCC6O95255 1503 aa8.84□□□□□ -0.99
NPAS3-207ENST00000549770 RGPD1P0DJD0 1748 aa8.83□□□□□ -1
NPAS3-207ENST00000549770 TNS1Q9HBL0 1735 aaKnown RBP8.83□□□□□ -1
NPAS3-207ENST00000549770 TRIM37O94972 964 aa8.83□□□□□ -1
NPAS3-207ENST00000549770 ZEB1P37275 1124 aaPredicted RBP8.83□□□□□ -1
NPAS3-207ENST00000549770 EMP3P54852 163 aa8.83□□□□□ -1
NPAS3-207ENST00000549770 ANKRD24Q8TF21 1146 aa8.83□□□□□ -1
NPAS3-207ENST00000549770 THRAP3Q9Y2W1 955 aaKnown RBP8.83□□□□□ -1
NPAS3-207ENST00000549770 ERBB3P21860 1342 aa8.82□□□□□ -1
NPAS3-207ENST00000549770 MAP3K19Q56UN5 1328 aa8.82□□□□□ -1
NPAS3-207ENST00000549770 RGPD2P0DJD1 1756 aa8.82□□□□□ -1
NPAS3-207ENST00000549770 C11orf95C9JLR9 678 aaPredicted RBP8.82□□□□□ -1
NPAS3-207ENST00000549770 AMPHP49418 695 aa8.82□□□□□ -1
NPAS3-207ENST00000549770 EN1Q05925 392 aaPredicted RBP8.82□□□□□ -1
NPAS3-207ENST00000549770 DDB1Q16531 1140 aa8.82□□□□□ -1
NPAS3-207ENST00000549770 FAM196AQ6ZSG2 479 aa8.82□□□□□ -1
NPAS3-207ENST00000549770 SPRYD3Q8NCJ5 442 aa8.82□□□□□ -1
NPAS3-207ENST00000549770 CARD10Q9BWT7 1032 aa8.82□□□□□ -1
NPAS3-207ENST00000549770 HOXC9P31274 260 aa8.81□□□□□ -1
NPAS3-207ENST00000549770 BAG6P46379 1132 aa8.81□□□□□ -1
NPAS3-207ENST00000549770 IP6K1Q92551 441 aa8.81□□□□□ -1
NPAS3-207ENST00000549770 DISP2A7MBM2 1401 aa8.8□□□□□ -1
NPAS3-207ENST00000549770 PEAK1Q9H792 1746 aa8.8□□□□□ -1
NPAS3-207ENST00000549770 HOXB1P14653 301 aaPredicted RBP8.8□□□□□ -1
NPAS3-207ENST00000549770 TNNT2P45379 298 aaPredicted RBP8.8□□□□□ -1
NPAS3-207ENST00000549770 PANK3Q9H999 370 aa8.8□□□□□ -1
NPAS3-207ENST00000549770 CCDC7Q96M83 1385 aa8.8□□□□□ -1
NPAS3-207ENST00000549770 FAM208AQ9UK61 1670 aaKnown RBP8.79□□□□□ -1
NPAS3-207ENST00000549770 PPM1GO15355 546 aaPredicted RBP8.79□□□□□ -1
NPAS3-207ENST00000549770 APBA3O96018 575 aa8.79□□□□□ -1
NPAS3-207ENST00000549770 EZH2Q15910 746 aaKnown RBP8.79□□□□□ -1
NPAS3-207ENST00000549770 USHBP1Q8N6Y0 703 aa8.79□□□□□ -1
NPAS3-207ENST00000549770 MARCH10Q8NA82 808 aaPredicted RBP8.79□□□□□ -1
NPAS3-207ENST00000549770 GPHNQ9NQX3 736 aaPredicted RBP8.79□□□□□ -1
NPAS3-207ENST00000549770 EMILIN1Q9Y6C2 1016 aa8.79□□□□□ -1
NPAS3-207ENST00000549770 SBF2Q86WG5 1849 aa8.79□□□□□ -1
NPAS3-207ENST00000549770 OVOS2A0A0G2JMS6 1433 aa8.79□□□□□ -1
NPAS3-207ENST00000549770 CGNL1Q0VF96 1302 aa8.79□□□□□ -1
NPAS3-207ENST00000549770 FAM205CA6NFA0 338 aa8.78□□□□□ -1
NPAS3-207ENST00000549770 EXOC5O00471 708 aa8.78□□□□□ -1
NPAS3-207ENST00000549770 IL2RBP14784 551 aa8.78□□□□□ -1
NPAS3-207ENST00000549770 HSP90AB2PQ58FF8 381 aa8.78□□□□□ -1
NPAS3-207ENST00000549770 PTF1AQ7RTS3 328 aa8.78□□□□□ -1
NPAS3-207ENST00000549770 CDCA7Q9BWT1 371 aaPredicted RBP8.78□□□□□ -1
NPAS3-207ENST00000549770 ZSWIM6Q9HCJ5 1215 aa8.78□□□□□ -1
NPAS3-207ENST00000549770 TNS2Q63HR2 1409 aa8.78□□□□□ -1
NPAS3-207ENST00000549770 KIF7Q2M1P5 1343 aa8.78□□□□□ -1
NPAS3-207ENST00000549770 ANKRD26Q9UPS8 1709 aa8.77□□□□□ -1
NPAS3-207ENST00000549770 RTL1A6NKG5 1358 aa8.77□□□□□ -1.01
NPAS3-207ENST00000549770 PSDA5PKW4 1024 aaPredicted RBP8.77□□□□□ -1.01
NPAS3-207ENST00000549770 FOXK1P85037 733 aa8.77□□□□□ -1.01
NPAS3-207ENST00000549770 DSG2Q14126 1118 aa8.77□□□□□ -1.01
NPAS3-207ENST00000549770 ARSIQ5FYB1 569 aa8.77□□□□□ -1.01
NPAS3-207ENST00000549770 PLPP6Q8IY26 295 aa8.77□□□□□ -1.01
NPAS3-207ENST00000549770 ANP32EQ9BTT0 268 aa8.77□□□□□ -1.01
NPAS3-207ENST00000549770 MAP2P11137 1827 aaKnown RBP8.77□□□□□ -1.01
NPAS3-207ENST00000549770 FLT4P35916 1363 aa8.76□□□□□ -1.01
NPAS3-207ENST00000549770 NBPF6Q5VWK0 638 aa8.76□□□□□ -1.01
NPAS3-207ENST00000549770 GPR153Q6NV75 609 aa8.76□□□□□ -1.01
NPAS3-207ENST00000549770 ACSBG1Q96GR2 724 aa8.76□□□□□ -1.01
NPAS3-207ENST00000549770 NBPF4Q96M43 638 aa8.76□□□□□ -1.01
NPAS3-207ENST00000549770 CAMKK2Q96RR4 588 aa8.76□□□□□ -1.01
NPAS3-207ENST00000549770 RREB1Q92766 1687 aa8.75□□□□□ -1.01
NPAS3-207ENST00000549770 MEGF6O75095 1541 aa8.75□□□□□ -1.01
NPAS3-207ENST00000549770 SMG6Q86US8 1419 aaKnown RBP8.75□□□□□ -1.01
NPAS3-207ENST00000549770 KCNQ2O43526 872 aa8.75□□□□□ -1.01
NPAS3-207ENST00000549770 PDE4AP27815 886 aa8.75□□□□□ -1.01
NPAS3-207ENST00000549770 CNGB1Q14028 1251 aaPredicted RBP8.75□□□□□ -1.01
NPAS3-207ENST00000549770 DDX54Q8TDD1 881 aaKnown RBP8.75□□□□□ -1.01
NPAS3-207ENST00000549770 KHSRPQ92945 711 aaKnown RBP eCLIP8.75□□□□□ -1.01
NPAS3-207ENST00000549770 CRISPLD2Q9H0B8 497 aa8.75□□□□□ -1.01
NPAS3-207ENST00000549770 INSRP06213 1382 aa8.74□□□□□ -1.01
NPAS3-207ENST00000549770 NUP188Q5SRE5 1749 aa8.74□□□□□ -1.01
NPAS3-207ENST00000549770 SHANK3Q9BYB0 1731 aa8.74□□□□□ -1.01
NPAS3-207ENST00000549770 R3HDM1Q15032 1099 aaKnown RBP8.74□□□□□ -1.01
NPAS3-207ENST00000549770 HS3ST6Q96QI5 342 aa8.74□□□□□ -1.01
NPAS3-207ENST00000549770 KAT6BQ8WYB5 2073 aa8.73□□□□□ -1.01
NPAS3-207ENST00000549770 NHSQ6T4R5 1651 aa8.73□□□□□ -1.01
NPAS3-207ENST00000549770 SLC34A2O95436 690 aa8.73□□□□□ -1.01
NPAS3-207ENST00000549770 MORC1Q86VD1 984 aa8.73□□□□□ -1.01
NPAS3-207ENST00000549770 POLKQ9UBT6 870 aa8.73□□□□□ -1.01
NPAS3-207ENST00000549770 KNSTRNQ9Y448 316 aa8.73□□□□□ -1.01
NPAS3-207ENST00000549770 POTEB3A0JP26 581 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms