RNA–Protein interactions for RNA: ENST00000549671.5

SYT1-208, Transcript of synaptotagmin 1, humanhuman

TSL 1 (best)

Gene SYT1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-208ENST00000549671 SOX11P35716 441 aa9.43□□□□□ -0.9
SYT1-208ENST00000549671 USP4Q13107 963 aa9.43□□□□□ -0.9
SYT1-208ENST00000549671 MCM6Q14566 821 aa9.43□□□□□ -0.9
SYT1-208ENST00000549671 DBN1Q16643 649 aa9.43□□□□□ -0.9
SYT1-208ENST00000549671 FOXR1Q6PIV2 292 aa9.43□□□□□ -0.9
SYT1-208ENST00000549671 SVOPQ8N4V2 548 aa9.43□□□□□ -0.9
SYT1-208ENST00000549671 FHDC1Q9C0D6 1143 aaPredicted RBP9.43□□□□□ -0.9
SYT1-208ENST00000549671 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
SYT1-208ENST00000549671 SLFNL1Q499Z3 407 aa9.42□□□□□ -0.9
SYT1-208ENST00000549671 ESCO1Q5FWF5 840 aa9.42□□□□□ -0.9
SYT1-208ENST00000549671 SIRT1Q96EB6 747 aa9.42□□□□□ -0.9
SYT1-208ENST00000549671 DOLKQ9UPQ8 538 aa9.42□□□□□ -0.9
SYT1-208ENST00000549671 CADPSQ9ULU8 1353 aa9.41□□□□□ -0.9
SYT1-208ENST00000549671 F11P03951 625 aa9.41□□□□□ -0.9
SYT1-208ENST00000549671 CENPCQ03188 943 aa9.41□□□□□ -0.9
SYT1-208ENST00000549671 WHAMMQ8TF30 809 aa9.41□□□□□ -0.9
SYT1-208ENST00000549671 LBRQ14739 615 aaKnown RBP9.4□□□□□ -0.9
SYT1-208ENST00000549671 MAP7D1Q3KQU3 841 aa9.4□□□□□ -0.9
SYT1-208ENST00000549671 RNF135Q8IUD6 432 aa9.4□□□□□ -0.9
SYT1-208ENST00000549671 GDPD2Q9HCC8 539 aa9.4□□□□□ -0.9
SYT1-208ENST00000549671 TIMMDC1Q9NPL8 285 aa9.4□□□□□ -0.9
SYT1-208ENST00000549671 RAB6BQ9NRW1 208 aa9.4□□□□□ -0.9
SYT1-208ENST00000549671 LRRC4BQ9NT99 713 aa9.4□□□□□ -0.9
SYT1-208ENST00000549671 A0A1B0GTH6 734 aa9.39□□□□□ -0.91
SYT1-208ENST00000549671 RIPOR1Q6ZS17 1223 aa9.39□□□□□ -0.91
SYT1-208ENST00000549671 ZSCAN10Q96SZ4 725 aaPredicted RBP9.39□□□□□ -0.91
SYT1-208ENST00000549671 VAC14Q08AM6 782 aa9.38□□□□□ -0.91
SYT1-208ENST00000549671 TRERF1Q96PN7 1200 aa9.38□□□□□ -0.91
SYT1-208ENST00000549671 ARHGEF11O15085 1522 aa9.37□□□□□ -0.91
SYT1-208ENST00000549671 TSGA10IPQ3SY00 556 aa9.37□□□□□ -0.91
SYT1-208ENST00000549671 GAS2L1Q99501 681 aaPredicted RBP9.37□□□□□ -0.91
SYT1-208ENST00000549671 CELA2BP08218 269 aaPredicted RBP9.36□□□□□ -0.91
SYT1-208ENST00000549671 ABL2P42684 1182 aa9.36□□□□□ -0.91
SYT1-208ENST00000549671 GNASQ5JWF2 1037 aa9.36□□□□□ -0.91
SYT1-208ENST00000549671 LYPD4Q6UWN0 246 aa9.36□□□□□ -0.91
SYT1-208ENST00000549671 GTPBP3Q969Y2 492 aaKnown RBP9.36□□□□□ -0.91
SYT1-208ENST00000549671 CFHR5Q9BXR6 569 aa9.36□□□□□ -0.91
SYT1-208ENST00000549671 NUCKS1Q9H1E3 243 aaKnown RBP9.36□□□□□ -0.91
SYT1-208ENST00000549671 ETNK1Q9HBU6 452 aa9.36□□□□□ -0.91
SYT1-208ENST00000549671 IGF1RP08069 1367 aa9.36□□□□□ -0.91
SYT1-208ENST00000549671 GTF2E1P29083 439 aaPredicted RBP9.35□□□□□ -0.91
SYT1-208ENST00000549671 MAP3K10Q02779 954 aa9.35□□□□□ -0.91
SYT1-208ENST00000549671 RASSF7Q02833 373 aa9.35□□□□□ -0.91
SYT1-208ENST00000549671 PPARGC1BQ86YN6 1023 aaKnown RBP9.35□□□□□ -0.91
SYT1-208ENST00000549671 RHBDD1Q8TEB9 315 aa9.35□□□□□ -0.91
SYT1-208ENST00000549671 CEP164Q9UPV0 1460 aa9.34□□□□□ -0.91
SYT1-208ENST00000549671 THBS1P07996 1170 aa9.34□□□□□ -0.91
SYT1-208ENST00000549671 KANK3Q6NY19 840 aa9.34□□□□□ -0.91
SYT1-208ENST00000549671 TMEM151AQ8N4L1 468 aa9.34□□□□□ -0.91
SYT1-208ENST00000549671 SCARF2Q96GP6 870 aaPredicted RBP9.34□□□□□ -0.91
SYT1-208ENST00000549671 ENAMQ9NRM1 1142 aa9.34□□□□□ -0.91
SYT1-208ENST00000549671 NSFL1CQ9UNZ2 370 aaKnown RBP9.34□□□□□ -0.91
SYT1-208ENST00000549671 GPR25O00155 361 aa9.33□□□□□ -0.92
SYT1-208ENST00000549671 SCNN1DP51172 638 aa9.33□□□□□ -0.92
SYT1-208ENST00000549671 SEMA3FQ13275 785 aa9.33□□□□□ -0.92
SYT1-208ENST00000549671 UBAP2LQ14157 1087 aaKnown RBP9.33□□□□□ -0.92
SYT1-208ENST00000549671 C4orf17Q53FE4 359 aa9.33□□□□□ -0.92
SYT1-208ENST00000549671 TMEM214Q6NUQ4 689 aaKnown RBP9.33□□□□□ -0.92
SYT1-208ENST00000549671 PLPP7Q8NBV4 271 aa9.33□□□□□ -0.92
SYT1-208ENST00000549671 COG6Q9Y2V7 657 aa9.33□□□□□ -0.92
SYT1-208ENST00000549671 INHAP05111 366 aa9.32□□□□□ -0.92
SYT1-208ENST00000549671 OXLD1Q5BKU9 147 aa9.32□□□□□ -0.92
SYT1-208ENST00000549671 NFATC2IPQ8NCF5 419 aa9.32□□□□□ -0.92
SYT1-208ENST00000549671 LZTS3O60299 673 aaPredicted RBP9.31□□□□□ -0.92
SYT1-208ENST00000549671 GDF11O95390 407 aa9.31□□□□□ -0.92
SYT1-208ENST00000549671 BCRP11274 1271 aa9.31□□□□□ -0.92
SYT1-208ENST00000549671 MX2P20592 715 aa9.31□□□□□ -0.92
SYT1-208ENST00000549671 MAP2K3P46734 347 aa9.31□□□□□ -0.92
SYT1-208ENST00000549671 MARSP56192 900 aaKnown RBP9.31□□□□□ -0.92
SYT1-208ENST00000549671 TLR1Q15399 786 aa9.31□□□□□ -0.92
SYT1-208ENST00000549671 C1orf216Q8TAB5 229 aa9.31□□□□□ -0.92
SYT1-208ENST00000549671 CRISPLD1Q9H336 500 aa9.31□□□□□ -0.92
SYT1-208ENST00000549671 PHF24Q9UPV7 400 aa9.31□□□□□ -0.92
SYT1-208ENST00000549671 MROH2BQ7Z745 1585 aa9.3□□□□□ -0.92
SYT1-208ENST00000549671 FANCD2Q9BXW9 1451 aa9.3□□□□□ -0.92
SYT1-208ENST00000549671 GDF10P55107 478 aa9.3□□□□□ -0.92
SYT1-208ENST00000549671 ACDQ96AP0 544 aa9.3□□□□□ -0.92
SYT1-208ENST00000549671 SLC4A9Q96Q91 983 aa9.3□□□□□ -0.92
SYT1-208ENST00000549671 ALG2Q9H553 416 aa9.29□□□□□ -0.92
SYT1-208ENST00000549671 DNMT3AQ9Y6K1 912 aaPredicted RBP9.29□□□□□ -0.92
SYT1-208ENST00000549671 CSB-PGBD3P0DP91 1061 aa9.28□□□□□ -0.92
SYT1-208ENST00000549671 MSX1P28360 303 aa9.28□□□□□ -0.92
SYT1-208ENST00000549671 PHKA2P46019 1235 aa9.28□□□□□ -0.92
SYT1-208ENST00000549671 MTFR1Q15390 333 aa9.28□□□□□ -0.92
SYT1-208ENST00000549671 WWC1Q8IX03 1113 aa9.28□□□□□ -0.92
SYT1-208ENST00000549671 PGBD3Q8N328 593 aa9.28□□□□□ -0.92
SYT1-208ENST00000549671 GPAMQ9HCL2 828 aa9.28□□□□□ -0.92
SYT1-208ENST00000549671 NDFIP2Q9NV92 336 aa9.28□□□□□ -0.92
SYT1-208ENST00000549671 ATXN7L1Q9ULK2 861 aaPredicted RBP9.28□□□□□ -0.92
SYT1-208ENST00000549671 SMTNP53814 917 aa9.27□□□□□ -0.93
SYT1-208ENST00000549671 EFHC2Q5JST6 749 aa9.27□□□□□ -0.93
SYT1-208ENST00000549671 ZNF295-AS1Q8N0V1 137 aa9.27□□□□□ -0.93
SYT1-208ENST00000549671 URB2Q14146 1524 aaKnown RBP9.26□□□□□ -0.93
SYT1-208ENST00000549671 OIP5O43482 229 aa9.26□□□□□ -0.93
SYT1-208ENST00000549671 STAU1O95793 577 aaKnown RBP9.26□□□□□ -0.93
SYT1-208ENST00000549671 FOXK2Q01167 660 aa9.26□□□□□ -0.93
SYT1-208ENST00000549671 FLIIQ13045 1269 aa9.26□□□□□ -0.93
SYT1-208ENST00000549671 TMEM229AB2RXF0 380 aa9.25□□□□□ -0.93
SYT1-208ENST00000549671 IRS1P35568 1242 aa9.25□□□□□ -0.93
SYT1-208ENST00000549671 TBC1D9Q6ZT07 1266 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms