RNA–Protein interactions for RNA: ENST00000549549.1

PRIM1-204, Transcript of DNA primase subunit 1, humanhuman

TSL 3

Gene PRIM1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-204ENST00000549549 INHAP05111 366 aa14.31□□□□□ -0.12
PRIM1-204ENST00000549549 PTPN5P54829 565 aa14.31□□□□□ -0.12
PRIM1-204ENST00000549549 SKOR1P84550 965 aa14.31□□□□□ -0.12
PRIM1-204ENST00000549549 CDK15Q96Q40 435 aa14.31□□□□□ -0.12
PRIM1-204ENST00000549549 RECKO95980 971 aa14.29□□□□□ -0.12
PRIM1-204ENST00000549549 STAG2Q8N3U4 1231 aa14.29□□□□□ -0.12
PRIM1-204ENST00000549549 C8orf37Q96NL8 207 aa14.29□□□□□ -0.12
PRIM1-204ENST00000549549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.29□□□□□ -0.12
PRIM1-204ENST00000549549 PPEF1O14829 653 aaPredicted RBP14.28□□□□□ -0.12
PRIM1-204ENST00000549549 TMC7Q7Z402 723 aa14.28□□□□□ -0.12
PRIM1-204ENST00000549549 CITED4Q96RK1 184 aa14.28□□□□□ -0.12
PRIM1-204ENST00000549549 TSPAN10Q9H1Z9 355 aaPredicted RBP14.28□□□□□ -0.12
PRIM1-204ENST00000549549 STAU1O95793 577 aaKnown RBP14.27□□□□□ -0.13
PRIM1-204ENST00000549549 FOXK2Q01167 660 aa14.27□□□□□ -0.13
PRIM1-204ENST00000549549 DHX9Q08211 1270 aaKnown RBP14.27□□□□□ -0.13
PRIM1-204ENST00000549549 C16orf46Q6P387 395 aa14.27□□□□□ -0.13
PRIM1-204ENST00000549549 ETNK1Q9HBU6 452 aa14.27□□□□□ -0.13
PRIM1-204ENST00000549549 MPSTP25325 297 aa14.26□□□□□ -0.13
PRIM1-204ENST00000549549 GRM5P41594 1212 aa14.26□□□□□ -0.13
PRIM1-204ENST00000549549 MPNDQ8N594 471 aa14.26□□□□□ -0.13
PRIM1-204ENST00000549549 VTI1AQ96AJ9 217 aa14.26□□□□□ -0.13
PRIM1-204ENST00000549549 SAP130Q9H0E3 1048 aa14.26□□□□□ -0.13
PRIM1-204ENST00000549549 BCL11AQ9H165 835 aa14.26□□□□□ -0.13
PRIM1-204ENST00000549549 TMPRSS4Q9NRS4 437 aa14.26□□□□□ -0.13
PRIM1-204ENST00000549549 A0A1W2PRU2 124 aa14.25□□□□□ -0.13
PRIM1-204ENST00000549549 P4HBP07237 508 aaKnown RBP14.25□□□□□ -0.13
PRIM1-204ENST00000549549 ANKLE1Q8NAG6 615 aa14.25□□□□□ -0.13
PRIM1-204ENST00000549549 TREHO43280 583 aa14.24□□□□□ -0.13
PRIM1-204ENST00000549549 PLA2G2CQ5R387 149 aa14.24□□□□□ -0.13
PRIM1-204ENST00000549549 CYLDQ9NQC7 956 aa14.24□□□□□ -0.13
PRIM1-204ENST00000549549 SERTAD1Q9UHV2 236 aa14.24□□□□□ -0.13
PRIM1-204ENST00000549549 RNF223E7ERA6 249 aa14.23□□□□□ -0.13
PRIM1-204ENST00000549549 NDUFB5O43674 189 aa14.23□□□□□ -0.13
PRIM1-204ENST00000549549 GNRH1P01148 92 aa14.23□□□□□ -0.13
PRIM1-204ENST00000549549 FMR1Q06787 632 aaKnown RBP eCLIP14.23□□□□□ -0.13
PRIM1-204ENST00000549549 MRPL58Q14197 206 aaKnown RBP14.23□□□□□ -0.13
PRIM1-204ENST00000549549 C2orf49Q9BVC5 232 aaPredicted RBP14.23□□□□□ -0.13
PRIM1-204ENST00000549549 SCHIP1Q9P0W5 487 aaPredicted RBP14.23□□□□□ -0.13
PRIM1-204ENST00000549549 LILRA1O75019 489 aa14.22□□□□□ -0.13
PRIM1-204ENST00000549549 DSC3Q14574 896 aa14.22□□□□□ -0.13
PRIM1-204ENST00000549549 MTFR1Q15390 333 aa14.22□□□□□ -0.13
PRIM1-204ENST00000549549 BRPF3Q9ULD4 1205 aa14.22□□□□□ -0.13
PRIM1-204ENST00000549549 PPP1R12BO60237 982 aaPredicted RBP14.21□□□□□ -0.13
PRIM1-204ENST00000549549 RPIAP49247 311 aa14.21□□□□□ -0.13
PRIM1-204ENST00000549549 ALKBH2Q6NS38 261 aa14.21□□□□□ -0.13
PRIM1-204ENST00000549549 CYP2U1Q7Z449 544 aa14.21□□□□□ -0.13
PRIM1-204ENST00000549549 ZNF784Q8NCA9 323 aaPredicted RBP14.21□□□□□ -0.13
PRIM1-204ENST00000549549 CHMP7Q8WUX9 453 aaPredicted RBP14.21□□□□□ -0.13
PRIM1-204ENST00000549549 TNFRSF10BO14763 440 aa14.2□□□□□ -0.14
PRIM1-204ENST00000549549 FSHRP23945 695 aa14.2□□□□□ -0.14
PRIM1-204ENST00000549549 COX20Q5RI15 118 aa14.2□□□□□ -0.14
PRIM1-204ENST00000549549 STIM2Q9P246 746 aa14.2□□□□□ -0.14
PRIM1-204ENST00000549549 A6NJY4 79 aa14.19□□□□□ -0.14
PRIM1-204ENST00000549549 FZD6O60353 706 aa14.19□□□□□ -0.14
PRIM1-204ENST00000549549 IGHA2P01877 340 aa14.19□□□□□ -0.14
PRIM1-204ENST00000549549 EIF1AXP47813 144 aaKnown RBP14.19□□□□□ -0.14
PRIM1-204ENST00000549549 SMTNP53814 917 aa14.19□□□□□ -0.14
PRIM1-204ENST00000549549 ARID5BQ14865 1188 aa14.19□□□□□ -0.14
PRIM1-204ENST00000549549 ESCO1Q5FWF5 840 aa14.19□□□□□ -0.14
PRIM1-204ENST00000549549 POTEAQ6S8J7 498 aa14.19□□□□□ -0.14
PRIM1-204ENST00000549549 EHBP1Q8NDI1 1231 aa14.19□□□□□ -0.14
PRIM1-204ENST00000549549 MYT1Q01538 1121 aa14.18□□□□□ -0.14
PRIM1-204ENST00000549549 TSNAXIP1Q2TAA8 658 aa14.18□□□□□ -0.14
PRIM1-204ENST00000549549 SLC9A9Q8IVB4 645 aa14.18□□□□□ -0.14
PRIM1-204ENST00000549549 BACH2Q9BYV9 841 aa14.18□□□□□ -0.14
PRIM1-204ENST00000549549 ZC3H6P61129 1189 aaKnown RBP14.17□□□□□ -0.14
PRIM1-204ENST00000549549 RC3H1Q5TC82 1133 aaKnown RBP14.17□□□□□ -0.14
PRIM1-204ENST00000549549 XAGE2Q96GT9 111 aa14.17□□□□□ -0.14
PRIM1-204ENST00000549549 MYO19Q96H55 970 aa14.17□□□□□ -0.14
PRIM1-204ENST00000549549 DMRTB1Q96MA1 342 aa14.17□□□□□ -0.14
PRIM1-204ENST00000549549 CCDC87Q9NVE4 849 aa14.17□□□□□ -0.14
PRIM1-204ENST00000549549 FGD1P98174 961 aa14.16□□□□□ -0.14
PRIM1-204ENST00000549549 PLCB3Q01970 1234 aa14.16□□□□□ -0.14
PRIM1-204ENST00000549549 PPP1R26Q5T8A7 1209 aaPredicted RBP14.16□□□□□ -0.14
PRIM1-204ENST00000549549 FAM129BQ96TA1 746 aa14.16□□□□□ -0.14
PRIM1-204ENST00000549549 SIAH2O43255 324 aa14.15□□□□□ -0.14
PRIM1-204ENST00000549549 ADD1P35611 737 aaKnown RBP14.15□□□□□ -0.14
PRIM1-204ENST00000549549 PSMA6P60900 246 aaKnown RBP14.15□□□□□ -0.14
PRIM1-204ENST00000549549 KCNC4Q03721 635 aa14.15□□□□□ -0.14
PRIM1-204ENST00000549549 LDLRAD1Q5T700 205 aa14.15□□□□□ -0.14
PRIM1-204ENST00000549549 CCDC116Q8IYX3 515 aa14.15□□□□□ -0.14
PRIM1-204ENST00000549549 PRKD2Q9BZL6 878 aa14.15□□□□□ -0.14
PRIM1-204ENST00000549549 QTRT2Q9H974 415 aaKnown RBP14.15□□□□□ -0.14
PRIM1-204ENST00000549549 CDK2AP1O14519 115 aa14.14□□□□□ -0.15
PRIM1-204ENST00000549549 GGCXP38435 758 aa14.14□□□□□ -0.15
PRIM1-204ENST00000549549 NR5A1Q13285 461 aa14.14□□□□□ -0.15
PRIM1-204ENST00000549549 TBCELQ5QJ74 424 aa14.14□□□□□ -0.15
PRIM1-204ENST00000549549 DRC1Q96MC2 740 aa14.14□□□□□ -0.15
PRIM1-204ENST00000549549 ITGBL1O95965 494 aaPredicted RBP14.13□□□□□ -0.15
PRIM1-204ENST00000549549 ADH1CP00326 375 aa14.13□□□□□ -0.15
PRIM1-204ENST00000549549 EHHADHQ08426 723 aa14.13□□□□□ -0.15
PRIM1-204ENST00000549549 SREK1Q8WXA9 508 aaKnown RBP14.13□□□□□ -0.15
PRIM1-204ENST00000549549 LRFN2Q9ULH4 789 aa14.13□□□□□ -0.15
PRIM1-204ENST00000549549 SCAMP3O14828 347 aaKnown RBP14.12□□□□□ -0.15
PRIM1-204ENST00000549549 PRPF40AO75400 957 aaKnown RBP14.12□□□□□ -0.15
PRIM1-204ENST00000549549 CD2BP2O95400 341 aaKnown RBP14.12□□□□□ -0.15
PRIM1-204ENST00000549549 ALKBH8Q96BT7 664 aaKnown RBP14.12□□□□□ -0.15
PRIM1-204ENST00000549549 IQSEC3Q9UPP2 1182 aaPredicted RBP14.12□□□□□ -0.15
PRIM1-204ENST00000549549 HRH3Q9Y5N1 445 aa14.12□□□□□ -0.15
PRIM1-204ENST00000549549 PDE3BQ13370 1112 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms