RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 UBR2Q8IWV8 1755 aa12.58□□□□□ -0.4
RAB5B-206ENST00000549505 AHDC1Q5TGY3 1603 aaPredicted RBP12.58□□□□□ -0.4
RAB5B-206ENST00000549505 AXIN2Q9Y2T1 843 aa12.58□□□□□ -0.4
RAB5B-206ENST00000549505 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
RAB5B-206ENST00000549505 CHD1LQ86WJ1 897 aa12.57□□□□□ -0.4
RAB5B-206ENST00000549505 RBM33Q96EV2 1170 aaKnown RBP12.57□□□□□ -0.4
RAB5B-206ENST00000549505 RNMTO43148 476 aaKnown RBP12.57□□□□□ -0.4
RAB5B-206ENST00000549505 KRT24Q2M2I5 525 aa12.57□□□□□ -0.4
RAB5B-206ENST00000549505 BMP2KLQ5H9B9 411 aa12.57□□□□□ -0.4
RAB5B-206ENST00000549505 C14orf37Q86TY3 774 aa12.57□□□□□ -0.4
RAB5B-206ENST00000549505 BRINP3Q76B58 766 aa12.56□□□□□ -0.4
RAB5B-206ENST00000549505 KDM6AO15550 1401 aaPredicted RBP12.56□□□□□ -0.4
RAB5B-206ENST00000549505 MEGF6O75095 1541 aa12.55□□□□□ -0.4
RAB5B-206ENST00000549505 SOX12O15370 315 aa12.55□□□□□ -0.4
RAB5B-206ENST00000549505 SLC4A2P04920 1241 aa12.55□□□□□ -0.4
RAB5B-206ENST00000549505 CEP85Q6P2H3 762 aa12.55□□□□□ -0.4
RAB5B-206ENST00000549505 C5P01031 1676 aa12.55□□□□□ -0.4
RAB5B-206ENST00000549505 EIF5BO60841 1220 aaKnown RBP12.54□□□□□ -0.4
RAB5B-206ENST00000549505 RGS3P49796 1198 aa12.54□□□□□ -0.4
RAB5B-206ENST00000549505 TBC1D32Q96NH3 1257 aa12.54□□□□□ -0.4
RAB5B-206ENST00000549505 ELL2O00472 640 aaPredicted RBP12.53□□□□□ -0.4
RAB5B-206ENST00000549505 FLIIQ13045 1269 aa12.53□□□□□ -0.4
RAB5B-206ENST00000549505 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.53□□□□□ -0.4
RAB5B-206ENST00000549505 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
RAB5B-206ENST00000549505 STK31Q9BXU1 1019 aa12.53□□□□□ -0.4
RAB5B-206ENST00000549505 LRP6O75581 1613 aa12.53□□□□□ -0.4
RAB5B-206ENST00000549505 OSBPL3Q9H4L5 887 aa12.53□□□□□ -0.4
RAB5B-206ENST00000549505 ZNF530Q6P9A1 599 aaPredicted RBP12.52□□□□□ -0.4
RAB5B-206ENST00000549505 G2E3Q7L622 706 aa12.52□□□□□ -0.4
RAB5B-206ENST00000549505 LRRC59Q96AG4 307 aaKnown RBP12.52□□□□□ -0.4
RAB5B-206ENST00000549505 ZBTB47Q9UFB7 747 aaPredicted RBP12.52□□□□□ -0.4
RAB5B-206ENST00000549505 WNK3Q9BYP7 1800 aa12.52□□□□□ -0.41
RAB5B-206ENST00000549505 LGR6Q9HBX8 967 aa12.52□□□□□ -0.41
RAB5B-206ENST00000549505 COL15A1P39059 1388 aa12.52□□□□□ -0.41
RAB5B-206ENST00000549505 COL14A1Q05707 1796 aaKnown RBP12.51□□□□□ -0.41
RAB5B-206ENST00000549505 USHBP1Q8N6Y0 703 aa12.51□□□□□ -0.41
RAB5B-206ENST00000549505 GNAI3P08754 354 aa12.51□□□□□ -0.41
RAB5B-206ENST00000549505 MIS18AQ9NYP9 233 aa12.51□□□□□ -0.41
RAB5B-206ENST00000549505 SALL3Q9BXA9 1300 aa12.51□□□□□ -0.41
RAB5B-206ENST00000549505 LTBP4Q8N2S1 1624 aa12.51□□□□□ -0.41
RAB5B-206ENST00000549505 NKX1-1Q15270 411 aaPredicted RBP12.51□□□□□ -0.41
RAB5B-206ENST00000549505 UTYO14607 1347 aa12.5□□□□□ -0.41
RAB5B-206ENST00000549505 RBM25P49756 843 aaKnown RBP12.5□□□□□ -0.41
RAB5B-206ENST00000549505 PHKG2P15735 406 aa12.5□□□□□ -0.41
RAB5B-206ENST00000549505 SLAIN2Q9P270 581 aa12.5□□□□□ -0.41
RAB5B-206ENST00000549505 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
RAB5B-206ENST00000549505 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
RAB5B-206ENST00000549505 LTV1Q96GA3 475 aaPredicted RBP12.49□□□□□ -0.41
RAB5B-206ENST00000549505 RTN4Q9NQC3 1192 aaKnown RBP12.49□□□□□ -0.41
RAB5B-206ENST00000549505 SPG7Q9UQ90 795 aa12.49□□□□□ -0.41
RAB5B-206ENST00000549505 TNS2Q63HR2 1409 aa12.49□□□□□ -0.41
RAB5B-206ENST00000549505 CICQ96RK0 1608 aaPredicted RBP12.49□□□□□ -0.41
RAB5B-206ENST00000549505 SEC24BO95487 1268 aa12.49□□□□□ -0.41
RAB5B-206ENST00000549505 WDR17Q8IZU2 1322 aa12.49□□□□□ -0.41
RAB5B-206ENST00000549505 HSP90AB1P08238 724 aaKnown RBP12.48□□□□□ -0.41
RAB5B-206ENST00000549505 MTX1Q13505 466 aa12.48□□□□□ -0.41
RAB5B-206ENST00000549505 MEIS3Q99687 375 aa12.48□□□□□ -0.41
RAB5B-206ENST00000549505 ADCY9O60503 1353 aa12.48□□□□□ -0.41
RAB5B-206ENST00000549505 AOX1Q06278 1338 aa12.48□□□□□ -0.41
RAB5B-206ENST00000549505 HSPA2P54652 639 aa12.48□□□□□ -0.41
RAB5B-206ENST00000549505 ATP8B2P98198 1209 aa12.48□□□□□ -0.41
RAB5B-206ENST00000549505 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
RAB5B-206ENST00000549505 POLA2Q14181 598 aa12.48□□□□□ -0.41
RAB5B-206ENST00000549505 BTBD11A6QL63 1104 aa12.48□□□□□ -0.41
RAB5B-206ENST00000549505 HMMRO75330 724 aa12.48□□□□□ -0.41
RAB5B-206ENST00000549505 GNAI2P04899 355 aa12.48□□□□□ -0.41
RAB5B-206ENST00000549505 SLC52A2Q9HAB3 445 aa12.48□□□□□ -0.41
RAB5B-206ENST00000549505 HDGFL1Q5TGJ6 251 aa12.47□□□□□ -0.41
RAB5B-206ENST00000549505 PLEKHM2Q8IWE5 1019 aa12.47□□□□□ -0.41
RAB5B-206ENST00000549505 DCAF5Q96JK2 942 aa12.47□□□□□ -0.41
RAB5B-206ENST00000549505 COL16A1Q07092 1604 aaPredicted RBP12.47□□□□□ -0.41
RAB5B-206ENST00000549505 KCPQ6ZWJ8 1503 aa12.47□□□□□ -0.41
RAB5B-206ENST00000549505 ALDH1L1O75891 902 aa12.47□□□□□ -0.41
RAB5B-206ENST00000549505 TATP17735 454 aaPredicted RBP12.47□□□□□ -0.41
RAB5B-206ENST00000549505 BEND3Q5T5X7 828 aa12.47□□□□□ -0.41
RAB5B-206ENST00000549505 DBF4Q9UBU7 674 aaPredicted RBP12.47□□□□□ -0.41
RAB5B-206ENST00000549505 DISP2A7MBM2 1401 aa12.46□□□□□ -0.41
RAB5B-206ENST00000549505 ERBB4Q15303 1308 aa12.46□□□□□ -0.41
RAB5B-206ENST00000549505 ZNF335Q9H4Z2 1342 aaPredicted RBP12.46□□□□□ -0.41
RAB5B-206ENST00000549505 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.41
RAB5B-206ENST00000549505 TEFQ10587 303 aa12.46□□□□□ -0.41
RAB5B-206ENST00000549505 IFNL2Q8IZJ0 200 aa12.46□□□□□ -0.41
RAB5B-206ENST00000549505 SSH3Q8TE77 659 aa12.46□□□□□ -0.41
RAB5B-206ENST00000549505 USP44Q9H0E7 712 aa12.46□□□□□ -0.41
RAB5B-206ENST00000549505 LRP10Q7Z4F1 713 aa12.46□□□□□ -0.42
RAB5B-206ENST00000549505 IL17RAQ96F46 866 aa12.46□□□□□ -0.42
RAB5B-206ENST00000549505 TOGARAM1Q9Y4F4 1720 aa12.45□□□□□ -0.42
RAB5B-206ENST00000549505 PDIA6Q15084 440 aa12.45□□□□□ -0.42
RAB5B-206ENST00000549505 CARD10Q9BWT7 1032 aa12.45□□□□□ -0.42
RAB5B-206ENST00000549505 HYPKQ9NX55 129 aa12.45□□□□□ -0.42
RAB5B-206ENST00000549505 USP35Q9P2H5 1018 aa12.45□□□□□ -0.42
RAB5B-206ENST00000549505 STAP2Q9UGK3 403 aa12.45□□□□□ -0.42
RAB5B-206ENST00000549505 RAPGEF4Q8WZA2 1011 aa12.45□□□□□ -0.42
RAB5B-206ENST00000549505 TTC22Q5TAA0 569 aa12.44□□□□□ -0.42
RAB5B-206ENST00000549505 ANKRD45Q5TZF3 282 aa12.44□□□□□ -0.42
RAB5B-206ENST00000549505 IL27Q8NEV9 243 aa12.44□□□□□ -0.42
RAB5B-206ENST00000549505 C1orf115Q9H7X2 142 aa12.44□□□□□ -0.42
RAB5B-206ENST00000549505 UPF2Q9HAU5 1272 aaKnown RBP12.44□□□□□ -0.42
RAB5B-206ENST00000549505 DDX21Q9NR30 783 aaKnown RBP eCLIP12.44□□□□□ -0.42
RAB5B-206ENST00000549505 NRAPQ86VF7 1730 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms