RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 HOXB7P09629 217 aa18.25■□□□□ 0.51
CACNB3-211ENST00000549226 GLI3P10071 1580 aa18.25■□□□□ 0.51
CACNB3-211ENST00000549226 THSD7AQ9UPZ6 1657 aa18.25■□□□□ 0.51
CACNB3-211ENST00000549226 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.24■□□□□ 0.51
CACNB3-211ENST00000549226 SCN11AQ9UI33 1791 aa18.24■□□□□ 0.51
CACNB3-211ENST00000549226 RNF123Q5XPI4 1314 aa18.23■□□□□ 0.51
CACNB3-211ENST00000549226 ALDH1L2Q3SY69 923 aa18.23■□□□□ 0.51
CACNB3-211ENST00000549226 BCL9O00512 1426 aa18.23■□□□□ 0.51
CACNB3-211ENST00000549226 RBM6P78332 1123 aaKnown RBP18.22■□□□□ 0.51
CACNB3-211ENST00000549226 TWISTNBQ3B726 338 aaPredicted RBP18.22■□□□□ 0.51
CACNB3-211ENST00000549226 A0A0G2JS52 829 aa18.21■□□□□ 0.51
CACNB3-211ENST00000549226 RARSP54136 660 aaKnown RBP18.21■□□□□ 0.51
CACNB3-211ENST00000549226 MYT1Q01538 1121 aa18.21■□□□□ 0.51
CACNB3-211ENST00000549226 TTC5Q8N0Z6 440 aa18.21■□□□□ 0.51
CACNB3-211ENST00000549226 NFATC2IPQ8NCF5 419 aa18.21■□□□□ 0.51
CACNB3-211ENST00000549226 TMOD3Q9NYL9 352 aa18.21■□□□□ 0.51
CACNB3-211ENST00000549226 VAMP4O75379 141 aa18.2■□□□□ 0.5
CACNB3-211ENST00000549226 NEFLP07196 543 aa18.2■□□□□ 0.5
CACNB3-211ENST00000549226 EIF4A1P60842 406 aaKnown RBP18.2■□□□□ 0.5
CACNB3-211ENST00000549226 ZNF790Q6PG37 636 aa18.2■□□□□ 0.5
CACNB3-211ENST00000549226 MIS18AQ9NYP9 233 aa18.2■□□□□ 0.5
CACNB3-211ENST00000549226 SUPT16HQ9Y5B9 1047 aaKnown RBP18.2■□□□□ 0.5
CACNB3-211ENST00000549226 SIPA1L3O60292 1781 aaPredicted RBP18.19■□□□□ 0.5
CACNB3-211ENST00000549226 BRPF1P55201 1214 aaPredicted RBP18.19■□□□□ 0.5
CACNB3-211ENST00000549226 MARCH10Q8NA82 808 aaPredicted RBP18.19■□□□□ 0.5
CACNB3-211ENST00000549226 C8orf58Q8NAV2 365 aa18.19■□□□□ 0.5
CACNB3-211ENST00000549226 KDM3BQ7LBC6 1761 aa18.18■□□□□ 0.5
CACNB3-211ENST00000549226 RRP1P56182 461 aaKnown RBP18.18■□□□□ 0.5
CACNB3-211ENST00000549226 SEPT12Q8IYM1 358 aa18.18■□□□□ 0.5
CACNB3-211ENST00000549226 HEG1Q9ULI3 1381 aa18.17■□□□□ 0.5
CACNB3-211ENST00000549226 KIF16BQ96L93 1317 aa18.17■□□□□ 0.5
CACNB3-211ENST00000549226 TSPYL6Q8N831 410 aa18.16■□□□□ 0.5
CACNB3-211ENST00000549226 FMNL2Q96PY5 1086 aa18.16■□□□□ 0.5
CACNB3-211ENST00000549226 SMC4Q9NTJ3 1288 aa18.16■□□□□ 0.5
CACNB3-211ENST00000549226 CCDC30Q5VVM6 783 aa18.15■□□□□ 0.5
CACNB3-211ENST00000549226 MS4A1P11836 297 aa18.14■□□□□ 0.49
CACNB3-211ENST00000549226 RXRBP28702 533 aa18.14■□□□□ 0.49
CACNB3-211ENST00000549226 SSH1Q8WYL5 1049 aa18.14■□□□□ 0.49
CACNB3-211ENST00000549226 VIRMAQ69YN4 1812 aaKnown RBP18.14■□□□□ 0.49
CACNB3-211ENST00000549226 TOGARAM1Q9Y4F4 1720 aa18.13■□□□□ 0.49
CACNB3-211ENST00000549226 IPO8O15397 1037 aaKnown RBP18.13■□□□□ 0.49
CACNB3-211ENST00000549226 GIGYF1O75420 1035 aaPredicted RBP18.13■□□□□ 0.49
CACNB3-211ENST00000549226 SNRPA1P09661 255 aaKnown RBP18.13■□□□□ 0.49
CACNB3-211ENST00000549226 PIGBQ92521 554 aa18.13■□□□□ 0.49
CACNB3-211ENST00000549226 STK31Q9BXU1 1019 aa18.13■□□□□ 0.49
CACNB3-211ENST00000549226 ELL2O00472 640 aaPredicted RBP18.12■□□□□ 0.49
CACNB3-211ENST00000549226 KCNQ3O43525 872 aa18.12■□□□□ 0.49
CACNB3-211ENST00000549226 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
CACNB3-211ENST00000549226 ERICH6BQ5W0A0 696 aa18.12■□□□□ 0.49
CACNB3-211ENST00000549226 VSIG10Q8N0Z9 540 aa18.12■□□□□ 0.49
CACNB3-211ENST00000549226 PAPPAQ13219 1627 aa18.12■□□□□ 0.49
CACNB3-211ENST00000549226 BCAR3O75815 825 aa18.11■□□□□ 0.49
CACNB3-211ENST00000549226 PRIM1P49642 420 aaKnown RBP18.11■□□□□ 0.49
CACNB3-211ENST00000549226 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
CACNB3-211ENST00000549226 KRT24Q2M2I5 525 aa18.11■□□□□ 0.49
CACNB3-211ENST00000549226 HDGFL1Q5TGJ6 251 aa18.11■□□□□ 0.49
CACNB3-211ENST00000549226 ARHGAP45Q92619 1136 aa18.11■□□□□ 0.49
CACNB3-211ENST00000549226 SMARCC1Q92922 1105 aaPredicted RBP18.11■□□□□ 0.49
CACNB3-211ENST00000549226 PDE3AQ14432 1141 aa18.1■□□□□ 0.49
CACNB3-211ENST00000549226 KRT27Q7Z3Y8 459 aa18.1■□□□□ 0.49
CACNB3-211ENST00000549226 MRPL50Q8N5N7 158 aaKnown RBP18.1■□□□□ 0.49
CACNB3-211ENST00000549226 SYTL4Q96C24 671 aaPredicted RBP18.1■□□□□ 0.49
CACNB3-211ENST00000549226 ZNF496Q96IT1 587 aaPredicted RBP18.1■□□□□ 0.49
CACNB3-211ENST00000549226 TEX13AQ9BXU3 409 aaPredicted RBP18.1■□□□□ 0.49
CACNB3-211ENST00000549226 ERBB4Q15303 1308 aa18.09■□□□□ 0.49
CACNB3-211ENST00000549226 ZKSCAN2Q63HK3 967 aa18.09■□□□□ 0.49
CACNB3-211ENST00000549226 FAM196AQ6ZSG2 479 aa18.09■□□□□ 0.49
CACNB3-211ENST00000549226 ATG3Q9NT62 314 aa18.09■□□□□ 0.49
CACNB3-211ENST00000549226 DOT1LQ8TEK3 1739 aa18.09■□□□□ 0.49
CACNB3-211ENST00000549226 KCPQ6ZWJ8 1503 aa18.08■□□□□ 0.49
CACNB3-211ENST00000549226 PTPRCP08575 1304 aa18.08■□□□□ 0.49
CACNB3-211ENST00000549226 BCL2L13Q9BXK5 485 aa18.07■□□□□ 0.48
CACNB3-211ENST00000549226 API5Q9BZZ5 524 aaKnown RBP18.07■□□□□ 0.48
CACNB3-211ENST00000549226 DBF4Q9UBU7 674 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-211ENST00000549226 RGS17Q9UGC6 210 aaPredicted RBP18.07■□□□□ 0.48
CACNB3-211ENST00000549226 UBR2Q8IWV8 1755 aa18.07■□□□□ 0.48
CACNB3-211ENST00000549226 ATF7IPQ6VMQ6 1270 aa18.06■□□□□ 0.48
CACNB3-211ENST00000549226 FRAT1Q92837 279 aaPredicted RBP18.06■□□□□ 0.48
CACNB3-211ENST00000549226 ACSBG1Q96GR2 724 aa18.06■□□□□ 0.48
CACNB3-211ENST00000549226 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
CACNB3-211ENST00000549226 ASAP1Q9ULH1 1129 aa18.05■□□□□ 0.48
CACNB3-211ENST00000549226 NOB1Q9ULX3 412 aaKnown RBP18.05■□□□□ 0.48
CACNB3-211ENST00000549226 NHSQ6T4R5 1651 aa18.04■□□□□ 0.48
CACNB3-211ENST00000549226 EIF2S2P20042 333 aaKnown RBP18.04■□□□□ 0.48
CACNB3-211ENST00000549226 HMGB2P26583 209 aaKnown RBP18.04■□□□□ 0.48
CACNB3-211ENST00000549226 FTSJ3Q8IY81 847 aaKnown RBP18.04■□□□□ 0.48
CACNB3-211ENST00000549226 HYPKQ9NX55 129 aa18.04■□□□□ 0.48
CACNB3-211ENST00000549226 ITGB4P16144 1822 aa18.04■□□□□ 0.48
CACNB3-211ENST00000549226 PTCD1O75127 700 aaKnown RBP18.03■□□□□ 0.48
CACNB3-211ENST00000549226 STARD3NLO95772 234 aa18.03■□□□□ 0.48
CACNB3-211ENST00000549226 BCL11BQ9C0K0 894 aaPredicted RBP18.03■□□□□ 0.48
CACNB3-211ENST00000549226 DDX21Q9NR30 783 aaKnown RBP eCLIP18.03■□□□□ 0.48
CACNB3-211ENST00000549226 RGS12O14924 1447 aa18.03■□□□□ 0.48
CACNB3-211ENST00000549226 PALLDQ8WX93 1383 aa18.03■□□□□ 0.48
CACNB3-211ENST00000549226 PLIN1O60240 522 aa18.02■□□□□ 0.48
CACNB3-211ENST00000549226 AAMPQ13685 434 aa18.02■□□□□ 0.48
CACNB3-211ENST00000549226 POTEAQ6S8J7 498 aa18.02■□□□□ 0.48
CACNB3-211ENST00000549226 DZIP1LQ8IYY4 767 aaKnown RBP18.02■□□□□ 0.48
CACNB3-211ENST00000549226 TRIM27P14373 513 aa18.01■□□□□ 0.47
CACNB3-211ENST00000549226 FLIIQ13045 1269 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms