RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 TMX3Q96JJ7 454 aa16.76■□□□□ 0.27
HDAC7-228ENST00000548938 NEK4P51957 841 aa16.76■□□□□ 0.27
HDAC7-228ENST00000548938 PRR36Q9H6K5 1346 aa16.75■□□□□ 0.27
HDAC7-228ENST00000548938 CEP170BQ9Y4F5 1589 aaPredicted RBP16.75■□□□□ 0.27
HDAC7-228ENST00000548938 CCDC39Q9UFE4 941 aa16.75■□□□□ 0.27
HDAC7-228ENST00000548938 EDC4Q6P2E9 1401 aaKnown RBP16.75■□□□□ 0.27
HDAC7-228ENST00000548938 MBD3O95983 291 aa16.74■□□□□ 0.27
HDAC7-228ENST00000548938 TSHZ3Q63HK5 1081 aa16.74■□□□□ 0.27
HDAC7-228ENST00000548938 AEBP1Q8IUX7 1158 aa16.74■□□□□ 0.27
HDAC7-228ENST00000548938 MCM5P33992 734 aa16.73■□□□□ 0.27
HDAC7-228ENST00000548938 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.73■□□□□ 0.27
HDAC7-228ENST00000548938 AATKQ6ZMQ8 1374 aa16.73■□□□□ 0.27
HDAC7-228ENST00000548938 BRD1O95696 1058 aa16.73■□□□□ 0.27
HDAC7-228ENST00000548938 PDE1AP54750 535 aa16.73■□□□□ 0.27
HDAC7-228ENST00000548938 CSPP1Q1MSJ5 1256 aa16.73■□□□□ 0.27
HDAC7-228ENST00000548938 NOL8Q76FK4 1167 aaKnown RBP16.73■□□□□ 0.27
HDAC7-228ENST00000548938 ADAMTSL3P82987 1691 aa16.73■□□□□ 0.27
HDAC7-228ENST00000548938 MCM10Q7L590 875 aa16.72■□□□□ 0.27
HDAC7-228ENST00000548938 PALD1Q9ULE6 856 aa16.72■□□□□ 0.27
HDAC7-228ENST00000548938 COG3Q96JB2 828 aa16.71■□□□□ 0.27
HDAC7-228ENST00000548938 MAP7D2Q96T17 732 aa16.71■□□□□ 0.27
HDAC7-228ENST00000548938 PTPRCP08575 1304 aa16.71■□□□□ 0.27
HDAC7-228ENST00000548938 CHL1O00533 1208 aa16.7■□□□□ 0.26
HDAC7-228ENST00000548938 OSBPL3Q9H4L5 887 aa16.7■□□□□ 0.26
HDAC7-228ENST00000548938 NUTM2FA1L443 756 aa16.7■□□□□ 0.26
HDAC7-228ENST00000548938 FOXD4L6Q3SYB3 417 aaPredicted RBP16.7■□□□□ 0.26
HDAC7-228ENST00000548938 FOXD4L3Q6VB84 417 aaPredicted RBP16.7■□□□□ 0.26
HDAC7-228ENST00000548938 ARID3AQ99856 593 aa16.7■□□□□ 0.26
HDAC7-228ENST00000548938 TSPY26PQ9H489 355 aa16.7■□□□□ 0.26
HDAC7-228ENST00000548938 CUL4AQ13619 759 aa16.69■□□□□ 0.26
HDAC7-228ENST00000548938 DIP2AQ14689 1571 aa16.69■□□□□ 0.26
HDAC7-228ENST00000548938 HMMRO75330 724 aa16.69■□□□□ 0.26
HDAC7-228ENST00000548938 PTMAP06454 111 aaKnown RBP16.69■□□□□ 0.26
HDAC7-228ENST00000548938 HAP1P54257 671 aaPredicted RBP16.69■□□□□ 0.26
HDAC7-228ENST00000548938 SULT6B1Q6IMI4 303 aa16.69■□□□□ 0.26
HDAC7-228ENST00000548938 SASS6Q6UVJ0 657 aa16.69■□□□□ 0.26
HDAC7-228ENST00000548938 ESYT1Q9BSJ8 1104 aa16.69■□□□□ 0.26
HDAC7-228ENST00000548938 EXOC6BQ9Y2D4 811 aa16.69■□□□□ 0.26
HDAC7-228ENST00000548938 DYNC1I1O14576 645 aa16.69■□□□□ 0.26
HDAC7-228ENST00000548938 GDPD2Q9HCC8 539 aa16.69■□□□□ 0.26
HDAC7-228ENST00000548938 KIAA0232Q92628 1395 aa16.68■□□□□ 0.26
HDAC7-228ENST00000548938 F6X3S4 739 aa16.68■□□□□ 0.26
HDAC7-228ENST00000548938 SLC4A2P04920 1241 aa16.68■□□□□ 0.26
HDAC7-228ENST00000548938 SLC4A10Q6U841 1118 aa16.68■□□□□ 0.26
HDAC7-228ENST00000548938 MCM2P49736 904 aa16.68■□□□□ 0.26
HDAC7-228ENST00000548938 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.68■□□□□ 0.26
HDAC7-228ENST00000548938 ANKLE2Q86XL3 938 aa16.67■□□□□ 0.26
HDAC7-228ENST00000548938 ZBTB7CA1YPR0 619 aa16.67■□□□□ 0.26
HDAC7-228ENST00000548938 GADD45BO75293 160 aaPredicted RBP16.67■□□□□ 0.26
HDAC7-228ENST00000548938 KCNA6P17658 529 aa16.67■□□□□ 0.26
HDAC7-228ENST00000548938 G2E3Q7L622 706 aa16.67■□□□□ 0.26
HDAC7-228ENST00000548938 ANO2Q9NQ90 1003 aa16.67■□□□□ 0.26
HDAC7-228ENST00000548938 EIF4A2Q14240 407 aaKnown RBP16.66■□□□□ 0.26
HDAC7-228ENST00000548938 MPNDQ8N594 471 aa16.66■□□□□ 0.26
HDAC7-228ENST00000548938 SALL3Q9BXA9 1300 aa16.66■□□□□ 0.26
HDAC7-228ENST00000548938 KIAA2012Q0VF49 1180 aa16.66■□□□□ 0.26
HDAC7-228ENST00000548938 UPF3BQ9BZI7 483 aaKnown RBP16.66■□□□□ 0.26
HDAC7-228ENST00000548938 MCCP23508 829 aa16.65■□□□□ 0.26
HDAC7-228ENST00000548938 SYAP1Q96A49 352 aaPredicted RBP16.65■□□□□ 0.26
HDAC7-228ENST00000548938 MIS18AQ9NYP9 233 aa16.65■□□□□ 0.26
HDAC7-228ENST00000548938 PLEKHG3A1L390 1219 aa16.65■□□□□ 0.26
HDAC7-228ENST00000548938 INTS4Q96HW7 963 aaKnown RBP16.65■□□□□ 0.26
HDAC7-228ENST00000548938 ACEP12821 1306 aa16.65■□□□□ 0.26
HDAC7-228ENST00000548938 SETD1BQ9UPS6 1966 aaKnown RBP16.64■□□□□ 0.25
HDAC7-228ENST00000548938 NRKQ7Z2Y5 1582 aa16.64■□□□□ 0.25
HDAC7-228ENST00000548938 XRN1Q8IZH2 1706 aaKnown RBP16.64■□□□□ 0.25
HDAC7-228ENST00000548938 ZNF142P52746 1687 aaPredicted RBP16.64■□□□□ 0.25
HDAC7-228ENST00000548938 MX1P20591 662 aa16.63■□□□□ 0.25
HDAC7-228ENST00000548938 CHMLP26374 656 aa16.63■□□□□ 0.25
HDAC7-228ENST00000548938 RILPL2Q969X0 211 aa16.63■□□□□ 0.25
HDAC7-228ENST00000548938 MON2Q7Z3U7 1717 aa16.63■□□□□ 0.25
HDAC7-228ENST00000548938 TRIM6-TRIM34B2RNG4 842 aa16.63■□□□□ 0.25
HDAC7-228ENST00000548938 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
HDAC7-228ENST00000548938 ANAPC15P60006 121 aa16.62■□□□□ 0.25
HDAC7-228ENST00000548938 USP48Q86UV5 1035 aa16.62■□□□□ 0.25
HDAC7-228ENST00000548938 CRB1P82279 1406 aa16.62■□□□□ 0.25
HDAC7-228ENST00000548938 AKAP12Q02952 1782 aa16.62■□□□□ 0.25
HDAC7-228ENST00000548938 ZNF830Q96NB3 372 aaPredicted RBP16.62■□□□□ 0.25
HDAC7-228ENST00000548938 LRRCC1Q9C099 1032 aa16.62■□□□□ 0.25
HDAC7-228ENST00000548938 GNAI2P04899 355 aa16.61■□□□□ 0.25
HDAC7-228ENST00000548938 CCT4P50991 539 aaKnown RBP16.61■□□□□ 0.25
HDAC7-228ENST00000548938 MTERF4Q7Z6M4 381 aaKnown RBP16.61■□□□□ 0.25
HDAC7-228ENST00000548938 JARID2Q92833 1246 aaPredicted RBP16.61■□□□□ 0.25
HDAC7-228ENST00000548938 USP25Q9UHP3 1055 aa16.61■□□□□ 0.25
HDAC7-228ENST00000548938 PRDM4Q9UKN5 801 aa16.61■□□□□ 0.25
HDAC7-228ENST00000548938 TOPAZ1Q8N9V7 1692 aa16.61■□□□□ 0.25
HDAC7-228ENST00000548938 PHF14O94880 888 aa16.61■□□□□ 0.25
HDAC7-228ENST00000548938 UNC5CLQ8IV45 518 aa16.61■□□□□ 0.25
HDAC7-228ENST00000548938 PNMA6EA0A0J9YXQ4 647 aa16.61■□□□□ 0.25
HDAC7-228ENST00000548938 IL25Q9H293 177 aa16.61■□□□□ 0.25
HDAC7-228ENST00000548938 TTC21BQ7Z4L5 1316 aa16.6■□□□□ 0.25
HDAC7-228ENST00000548938 DNTTIP2Q5QJE6 756 aaKnown RBP16.6■□□□□ 0.25
HDAC7-228ENST00000548938 ITSN1Q15811 1721 aa16.6■□□□□ 0.25
HDAC7-228ENST00000548938 TPRNQ4KMQ1 711 aa16.6■□□□□ 0.25
HDAC7-228ENST00000548938 WDR33Q9C0J8 1336 aaKnown RBP16.6■□□□□ 0.25
HDAC7-228ENST00000548938 SSH2Q76I76 1423 aa16.59■□□□□ 0.25
HDAC7-228ENST00000548938 USP6P35125 1406 aa16.59■□□□□ 0.25
HDAC7-228ENST00000548938 FOXO3O43524 673 aa16.59■□□□□ 0.25
HDAC7-228ENST00000548938 C17orf53Q8N3J3 647 aaPredicted RBP16.59■□□□□ 0.25
HDAC7-228ENST00000548938 MYRIPQ8NFW9 859 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms