RNA–Protein interactions for RNA: ENST00000548735.1

KRT6A-202, Transcript of keratin 6A, humanhuman

TSL 2

Gene KRT6A, Length 227 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6A-202ENST00000548735 GNPATO15228 680 aa13.49□□□□□ -0.25
KRT6A-202ENST00000548735 MMP10P09238 476 aa13.48□□□□□ -0.25
KRT6A-202ENST00000548735 ADRA2BP18089 450 aa13.48□□□□□ -0.25
KRT6A-202ENST00000548735 AMIGO3Q86WK7 504 aa13.48□□□□□ -0.25
KRT6A-202ENST00000548735 LINC00116Q8NCU8 138 aa13.48□□□□□ -0.25
KRT6A-202ENST00000548735 TNRC6CQ9HCJ0 1690 aaKnown RBP13.47□□□□□ -0.25
KRT6A-202ENST00000548735 PCNTO95613 3336 aa13.47□□□□□ -0.25
KRT6A-202ENST00000548735 NLGN1Q8N2Q7 840 aa13.47□□□□□ -0.25
KRT6A-202ENST00000548735 KDRP35968 1356 aa13.46□□□□□ -0.25
KRT6A-202ENST00000548735 ATP6V1AP38606 617 aa13.46□□□□□ -0.25
KRT6A-202ENST00000548735 IFNL2Q8IZJ0 200 aa13.46□□□□□ -0.25
KRT6A-202ENST00000548735 CCDC87Q9NVE4 849 aa13.46□□□□□ -0.25
KRT6A-202ENST00000548735 RTCBQ9Y3I0 505 aaKnown RBP13.46□□□□□ -0.25
KRT6A-202ENST00000548735 RBM46Q8TBY0 533 aaKnown RBP13.45□□□□□ -0.26
KRT6A-202ENST00000548735 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
KRT6A-202ENST00000548735 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
KRT6A-202ENST00000548735 TRAPPC3LQ5T215 181 aa13.44□□□□□ -0.26
KRT6A-202ENST00000548735 C16orf71Q8IYS4 520 aaPredicted RBP13.44□□□□□ -0.26
KRT6A-202ENST00000548735 BCS1LQ9Y276 419 aa13.44□□□□□ -0.26
KRT6A-202ENST00000548735 CNTNAP4Q9C0A0 1308 aa13.43□□□□□ -0.26
KRT6A-202ENST00000548735 HSP90AB1P08238 724 aaKnown RBP13.43□□□□□ -0.26
KRT6A-202ENST00000548735 PHKG2P15735 406 aa13.43□□□□□ -0.26
KRT6A-202ENST00000548735 FSTL1Q12841 308 aa13.43□□□□□ -0.26
KRT6A-202ENST00000548735 ITPK1Q13572 414 aa13.43□□□□□ -0.26
KRT6A-202ENST00000548735 RC3H1Q5TC82 1133 aaKnown RBP13.43□□□□□ -0.26
KRT6A-202ENST00000548735 DNAJC5GQ8N7S2 189 aa13.43□□□□□ -0.26
KRT6A-202ENST00000548735 ASAP1Q9ULH1 1129 aa13.43□□□□□ -0.26
KRT6A-202ENST00000548735 EMILIN1Q9Y6C2 1016 aa13.43□□□□□ -0.26
KRT6A-202ENST00000548735 MYH14Q7Z406 1995 aaKnown RBP13.43□□□□□ -0.26
KRT6A-202ENST00000548735 KDM2BQ8NHM5 1336 aa13.42□□□□□ -0.26
KRT6A-202ENST00000548735 ARHGAP27Q6ZUM4 889 aa13.42□□□□□ -0.26
KRT6A-202ENST00000548735 PARP3Q9Y6F1 533 aa13.42□□□□□ -0.26
KRT6A-202ENST00000548735 SBF1O95248 1867 aa13.42□□□□□ -0.26
KRT6A-202ENST00000548735 ERVV-2B6SEH9 535 aa13.41□□□□□ -0.26
KRT6A-202ENST00000548735 FCHSD2O94868 740 aa13.41□□□□□ -0.26
KRT6A-202ENST00000548735 EYA1Q99502 592 aa13.41□□□□□ -0.26
KRT6A-202ENST00000548735 ATG3Q9NT62 314 aa13.41□□□□□ -0.26
KRT6A-202ENST00000548735 ZC3H4Q9UPT8 1303 aaKnown RBP13.4□□□□□ -0.26
KRT6A-202ENST00000548735 A0A0G2JLW4 131 aa13.4□□□□□ -0.26
KRT6A-202ENST00000548735 PPM1GO15355 546 aaPredicted RBP13.4□□□□□ -0.26
KRT6A-202ENST00000548735 RFC4P35249 363 aa13.4□□□□□ -0.26
KRT6A-202ENST00000548735 SMIM5Q71RC9 77 aa13.4□□□□□ -0.26
KRT6A-202ENST00000548735 RPS6KA4O75676 772 aa13.39□□□□□ -0.27
KRT6A-202ENST00000548735 GYS1P13807 737 aa13.39□□□□□ -0.27
KRT6A-202ENST00000548735 JMYQ8N9B5 988 aa13.39□□□□□ -0.27
KRT6A-202ENST00000548735 KLRG1Q96E93 195 aa13.39□□□□□ -0.27
KRT6A-202ENST00000548735 NMRK2Q9NPI5 230 aa13.39□□□□□ -0.27
KRT6A-202ENST00000548735 DPEP1P16444 411 aa13.38□□□□□ -0.27
KRT6A-202ENST00000548735 C9orf131Q5VYM1 1079 aa13.38□□□□□ -0.27
KRT6A-202ENST00000548735 ARHGEF1Q92888 912 aaKnown RBP13.38□□□□□ -0.27
KRT6A-202ENST00000548735 DCAF5Q96JK2 942 aa13.38□□□□□ -0.27
KRT6A-202ENST00000548735 PIM2Q9P1W9 311 aa13.38□□□□□ -0.27
KRT6A-202ENST00000548735 DALRD3Q5D0E6 543 aaKnown RBP13.37□□□□□ -0.27
KRT6A-202ENST00000548735 CARD14Q9BXL6 1004 aa13.37□□□□□ -0.27
KRT6A-202ENST00000548735 DLEC1Q9Y238 1755 aa13.37□□□□□ -0.27
KRT6A-202ENST00000548735 KCPQ6ZWJ8 1503 aa13.36□□□□□ -0.27
KRT6A-202ENST00000548735 AMOTQ4VCS5 1084 aa13.36□□□□□ -0.27
KRT6A-202ENST00000548735 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
KRT6A-202ENST00000548735 TJP1Q07157 1748 aa13.36□□□□□ -0.27
KRT6A-202ENST00000548735 SCN11AQ9UI33 1791 aa13.35□□□□□ -0.27
KRT6A-202ENST00000548735 PLEKHO1Q53GL0 409 aaPredicted RBP13.35□□□□□ -0.27
KRT6A-202ENST00000548735 SMC1BQ8NDV3 1235 aa13.35□□□□□ -0.27
KRT6A-202ENST00000548735 POLKQ9UBT6 870 aa13.35□□□□□ -0.27
KRT6A-202ENST00000548735 KDM6AO15550 1401 aaPredicted RBP13.34□□□□□ -0.27
KRT6A-202ENST00000548735 KCNA3P22001 575 aa13.34□□□□□ -0.27
KRT6A-202ENST00000548735 EIF4A2Q14240 407 aaKnown RBP13.34□□□□□ -0.27
KRT6A-202ENST00000548735 SLC4A9Q96Q91 983 aa13.34□□□□□ -0.27
KRT6A-202ENST00000548735 RNF181Q9P0P0 153 aa13.34□□□□□ -0.27
KRT6A-202ENST00000548735 USP42Q9H9J4 1324 aaKnown RBP13.34□□□□□ -0.27
KRT6A-202ENST00000548735 TIAM2Q8IVF5 1701 aa13.33□□□□□ -0.27
KRT6A-202ENST00000548735 CABP4P57796 275 aa13.33□□□□□ -0.28
KRT6A-202ENST00000548735 AFDNP55196 1824 aaKnown RBP13.33□□□□□ -0.28
KRT6A-202ENST00000548735 ADAMTS7Q9UKP4 1686 aa13.33□□□□□ -0.28
KRT6A-202ENST00000548735 NRXN2Q9P2S2 1712 aa13.33□□□□□ -0.28
KRT6A-202ENST00000548735 VIRMAQ69YN4 1812 aaKnown RBP13.32□□□□□ -0.28
KRT6A-202ENST00000548735 CCDC88AQ3V6T2 1871 aa13.32□□□□□ -0.28
KRT6A-202ENST00000548735 CRKLP46109 303 aaKnown RBP13.32□□□□□ -0.28
KRT6A-202ENST00000548735 C1orf141Q5JVX7 400 aa13.32□□□□□ -0.28
KRT6A-202ENST00000548735 ZNF530Q6P9A1 599 aaPredicted RBP13.32□□□□□ -0.28
KRT6A-202ENST00000548735 DICER1Q9UPY3 1922 aaKnown RBP13.31□□□□□ -0.28
KRT6A-202ENST00000548735 MTHFSP49914 203 aa13.3□□□□□ -0.28
KRT6A-202ENST00000548735 TNS4Q8IZW8 715 aa13.3□□□□□ -0.28
KRT6A-202ENST00000548735 ZPR1O75312 459 aa13.29□□□□□ -0.28
KRT6A-202ENST00000548735 PRELPP51888 382 aa13.29□□□□□ -0.28
KRT6A-202ENST00000548735 DDR1Q08345 913 aa13.29□□□□□ -0.28
KRT6A-202ENST00000548735 FKBP8Q14318 412 aa13.29□□□□□ -0.28
KRT6A-202ENST00000548735 COL13A1Q5TAT6 717 aaPredicted RBP13.29□□□□□ -0.28
KRT6A-202ENST00000548735 RRAGCQ9HB90 399 aa13.29□□□□□ -0.28
KRT6A-202ENST00000548735 POLRMTO00411 1230 aaKnown RBP13.28□□□□□ -0.28
KRT6A-202ENST00000548735 PTCD1O75127 700 aaKnown RBP13.28□□□□□ -0.28
KRT6A-202ENST00000548735 VEGFAP15692 232 aaPredicted RBP13.28□□□□□ -0.28
KRT6A-202ENST00000548735 LMNB1P20700 586 aa13.28□□□□□ -0.28
KRT6A-202ENST00000548735 MRC1P22897 1456 aa13.28□□□□□ -0.28
KRT6A-202ENST00000548735 GLTPD2A6NH11 291 aa13.27□□□□□ -0.29
KRT6A-202ENST00000548735 HTRA3P83110 453 aa13.27□□□□□ -0.29
KRT6A-202ENST00000548735 SRP68Q9UHB9 627 aaKnown RBP13.27□□□□□ -0.29
KRT6A-202ENST00000548735 TM4SF1P30408 202 aa13.26□□□□□ -0.29
KRT6A-202ENST00000548735 CHRNA5P30532 468 aa13.26□□□□□ -0.29
KRT6A-202ENST00000548735 TIMELESSQ9UNS1 1208 aa13.26□□□□□ -0.29
KRT6A-202ENST00000548735 SOS1Q07889 1333 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms