RNA–Protein interactions for RNA: ENST00000548422.1

CDK17-204, Transcript of cyclin dependent kinase 17, humanhuman

TSL 3

Gene CDK17, Length 892 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK17-204ENST00000548422 CARD10Q9BWT7 1032 aa10.41□□□□□ -0.74
CDK17-204ENST00000548422 CDC42BPAQ5VT25 1732 aa10.41□□□□□ -0.74
CDK17-204ENST00000548422 IBTKQ9P2D0 1353 aaPredicted RBP10.4□□□□□ -0.74
CDK17-204ENST00000548422 SRCAPQ6ZRS2 3230 aa10.4□□□□□ -0.74
CDK17-204ENST00000548422 ZNF500O60304 480 aaPredicted RBP10.4□□□□□ -0.74
CDK17-204ENST00000548422 IRX6P78412 446 aaPredicted RBP10.4□□□□□ -0.74
CDK17-204ENST00000548422 CCDC173Q0VFZ6 552 aa10.4□□□□□ -0.74
CDK17-204ENST00000548422 BECN1Q14457 450 aa10.4□□□□□ -0.74
CDK17-204ENST00000548422 PPP1R9BQ96SB3 815 aa10.4□□□□□ -0.74
CDK17-204ENST00000548422 CCDC18Q5T9S5 1454 aa10.4□□□□□ -0.74
CDK17-204ENST00000548422 SCAF11Q99590 1463 aaKnown RBP10.4□□□□□ -0.74
CDK17-204ENST00000548422 ZC3H13Q5T200 1668 aaKnown RBP10.4□□□□□ -0.74
CDK17-204ENST00000548422 FGD6Q6ZV73 1430 aa10.4□□□□□ -0.75
CDK17-204ENST00000548422 DHX29Q7Z478 1369 aaKnown RBP10.39□□□□□ -0.75
CDK17-204ENST00000548422 PHLPP1O60346 1717 aa10.39□□□□□ -0.75
CDK17-204ENST00000548422 LCE2BO14633 110 aa10.39□□□□□ -0.75
CDK17-204ENST00000548422 MDM2Q00987 491 aaPredicted RBP10.39□□□□□ -0.75
CDK17-204ENST00000548422 GABPB1Q06547 395 aaPredicted RBP10.39□□□□□ -0.75
CDK17-204ENST00000548422 HSP90AB3PQ58FF7 597 aa10.39□□□□□ -0.75
CDK17-204ENST00000548422 KCNG1Q9UIX4 513 aa10.39□□□□□ -0.75
CDK17-204ENST00000548422 HPS5Q9UPZ3 1129 aa10.39□□□□□ -0.75
CDK17-204ENST00000548422 XIRP1Q702N8 1843 aaKnown RBP10.39□□□□□ -0.75
CDK17-204ENST00000548422 TRIM66O15016 1216 aa10.38□□□□□ -0.75
CDK17-204ENST00000548422 PPP4CP60510 307 aa10.38□□□□□ -0.75
CDK17-204ENST00000548422 NBPF1Q3BBV0 1214 aa10.38□□□□□ -0.75
CDK17-204ENST00000548422 NUDCQ9Y266 331 aa10.38□□□□□ -0.75
CDK17-204ENST00000548422 KIF3AQ9Y496 699 aa10.38□□□□□ -0.75
CDK17-204ENST00000548422 EID1Q9Y6B2 187 aa10.38□□□□□ -0.75
CDK17-204ENST00000548422 RTEL1-TNFRSF6BF6WH68 1400 aa10.38□□□□□ -0.75
CDK17-204ENST00000548422 TMEM94Q12767 1356 aa10.38□□□□□ -0.75
CDK17-204ENST00000548422 TULP2O00295 520 aa10.37□□□□□ -0.75
CDK17-204ENST00000548422 KIF3BO15066 747 aa10.37□□□□□ -0.75
CDK17-204ENST00000548422 TTLL12Q14166 644 aaPredicted RBP10.37□□□□□ -0.75
CDK17-204ENST00000548422 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDK17-204ENST00000548422 NECTIN2Q92692 538 aa10.37□□□□□ -0.75
CDK17-204ENST00000548422 RBM28Q9NW13 759 aaKnown RBP10.37□□□□□ -0.75
CDK17-204ENST00000548422 CFDP1Q9UEE9 299 aaPredicted RBP10.37□□□□□ -0.75
CDK17-204ENST00000548422 TSR3Q9UJK0 312 aaKnown RBP10.37□□□□□ -0.75
CDK17-204ENST00000548422 RAD50Q92878 1312 aa10.36□□□□□ -0.75
CDK17-204ENST00000548422 SASS6Q6UVJ0 657 aa10.36□□□□□ -0.75
CDK17-204ENST00000548422 TXNDC2Q86VQ3 553 aa10.36□□□□□ -0.75
CDK17-204ENST00000548422 FEZ1Q99689 392 aa10.36□□□□□ -0.75
CDK17-204ENST00000548422 BSDC1Q9NW68 430 aaPredicted RBP10.36□□□□□ -0.75
CDK17-204ENST00000548422 FAM13BQ9NYF5 915 aa10.36□□□□□ -0.75
CDK17-204ENST00000548422 SLAIN2Q9P270 581 aa10.36□□□□□ -0.75
CDK17-204ENST00000548422 MSH6P52701 1360 aa10.36□□□□□ -0.75
CDK17-204ENST00000548422 RRBP1Q9P2E9 1410 aaKnown RBP10.35□□□□□ -0.75
CDK17-204ENST00000548422 KCNA6P17658 529 aa10.35□□□□□ -0.75
CDK17-204ENST00000548422 MFAP1P55081 439 aaKnown RBP10.35□□□□□ -0.75
CDK17-204ENST00000548422 PROSER2Q86WR7 435 aaPredicted RBP10.35□□□□□ -0.75
CDK17-204ENST00000548422 PSMD1Q99460 953 aa10.35□□□□□ -0.75
CDK17-204ENST00000548422 GRPEL1Q9HAV7 217 aa10.35□□□□□ -0.75
CDK17-204ENST00000548422 GPCPD1Q9NPB8 672 aa10.35□□□□□ -0.75
CDK17-204ENST00000548422 RAI14Q9P0K7 980 aa10.35□□□□□ -0.75
CDK17-204ENST00000548422 CALCOCO1Q9P1Z2 691 aa10.35□□□□□ -0.75
CDK17-204ENST00000548422 VPS8Q8N3P4 1428 aa10.34□□□□□ -0.75
CDK17-204ENST00000548422 ABCC3O15438 1527 aa10.34□□□□□ -0.75
CDK17-204ENST00000548422 GPATCH8Q9UKJ3 1502 aaKnown RBP10.34□□□□□ -0.75
CDK17-204ENST00000548422 DDX11L8A8MPP1 907 aa10.34□□□□□ -0.75
CDK17-204ENST00000548422 MSNP26038 577 aaKnown RBP10.34□□□□□ -0.75
CDK17-204ENST00000548422 RBM25P49756 843 aaKnown RBP10.34□□□□□ -0.75
CDK17-204ENST00000548422 HMGN5P82970 282 aaKnown RBP10.34□□□□□ -0.75
CDK17-204ENST00000548422 TMEM132AQ24JP5 1023 aa10.34□□□□□ -0.75
CDK17-204ENST00000548422 NBPF11Q86T75 865 aa10.34□□□□□ -0.75
CDK17-204ENST00000548422 SULF1Q8IWU6 871 aa10.34□□□□□ -0.75
CDK17-204ENST00000548422 RDH13Q8NBN7 331 aa10.34□□□□□ -0.75
CDK17-204ENST00000548422 TIGD1Q96MW7 591 aa10.34□□□□□ -0.75
CDK17-204ENST00000548422 WBP1LQ9NX94 342 aa10.34□□□□□ -0.75
CDK17-204ENST00000548422 POGKQ9P215 609 aa10.34□□□□□ -0.75
CDK17-204ENST00000548422 ATAD2Q6PL18 1390 aa10.34□□□□□ -0.75
CDK17-204ENST00000548422 TTC36A6NLP5 189 aa10.33□□□□□ -0.76
CDK17-204ENST00000548422 NUTM2BA6NNL0 878 aaPredicted RBP10.33□□□□□ -0.76
CDK17-204ENST00000548422 VGLL3A8MV65 326 aa10.33□□□□□ -0.76
CDK17-204ENST00000548422 NUTM2EB1AL46 878 aaPredicted RBP10.33□□□□□ -0.76
CDK17-204ENST00000548422 PATL2C9JE40 543 aaKnown RBP10.33□□□□□ -0.76
CDK17-204ENST00000548422 GTF2F1P35269 517 aaKnown RBP eCLIP10.33□□□□□ -0.76
CDK17-204ENST00000548422 RBM6P78332 1123 aaKnown RBP10.33□□□□□ -0.76
CDK17-204ENST00000548422 AMHR2Q16671 573 aa10.33□□□□□ -0.76
CDK17-204ENST00000548422 NUTM2DQ5VT03 806 aaPredicted RBP10.33□□□□□ -0.76
CDK17-204ENST00000548422 CCDC125Q86Z20 511 aa10.33□□□□□ -0.76
CDK17-204ENST00000548422 EGFL6Q8IUX8 553 aa10.33□□□□□ -0.76
CDK17-204ENST00000548422 NUTM2AQ8IVF1 878 aaPredicted RBP10.33□□□□□ -0.76
CDK17-204ENST00000548422 PRIMPOLQ96LW4 560 aa10.33□□□□□ -0.76
CDK17-204ENST00000548422 BRMS1Q9HCU9 246 aa10.33□□□□□ -0.76
CDK17-204ENST00000548422 LRP6O75581 1613 aa10.33□□□□□ -0.76
CDK17-204ENST00000548422 SLIT1O75093 1534 aa10.33□□□□□ -0.76
CDK17-204ENST00000548422 ARHGAP23Q9P227 1491 aa10.32□□□□□ -0.76
CDK17-204ENST00000548422 PDE4DQ08499 809 aa10.32□□□□□ -0.76
CDK17-204ENST00000548422 SKOR2Q2VWA4 1001 aaPredicted RBP10.32□□□□□ -0.76
CDK17-204ENST00000548422 NGLY1Q96IV0 654 aa10.32□□□□□ -0.76
CDK17-204ENST00000548422 LRRIQ1Q96JM4 1722 aa10.32□□□□□ -0.76
CDK17-204ENST00000548422 COL16A1Q07092 1604 aaPredicted RBP10.32□□□□□ -0.76
CDK17-204ENST00000548422 NKTRP30414 1462 aaKnown RBP10.31□□□□□ -0.76
CDK17-204ENST00000548422 ARHGAP35Q9NRY4 1499 aa10.31□□□□□ -0.76
CDK17-204ENST00000548422 UQCRHLA0A096LP55 91 aa10.31□□□□□ -0.76
CDK17-204ENST00000548422 UQCRHP07919 91 aa10.31□□□□□ -0.76
CDK17-204ENST00000548422 SATB1Q01826 763 aa10.31□□□□□ -0.76
CDK17-204ENST00000548422 CC2D2BQ6DHV5 1058 aa10.31□□□□□ -0.76
CDK17-204ENST00000548422 PDCL2Q8N4E4 241 aa10.31□□□□□ -0.76
CDK17-204ENST00000548422 SLC52A1Q9NWF4 448 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms