RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 ITGB4P16144 1822 aa22.39■■□□□ 1.17
KRT4-201ENST00000548097 SLC39A6Q13433 755 aa22.38■■□□□ 1.17
KRT4-201ENST00000548097 ERVV-2B6SEH9 535 aa22.37■■□□□ 1.17
KRT4-201ENST00000548097 TAF7Q15545 349 aaPredicted RBP22.37■■□□□ 1.17
KRT4-201ENST00000548097 PIGBQ92521 554 aa22.37■■□□□ 1.17
KRT4-201ENST00000548097 TMOD3Q9NYL9 352 aa22.37■■□□□ 1.17
KRT4-201ENST00000548097 SIPA1L3O60292 1781 aaPredicted RBP22.37■■□□□ 1.17
KRT4-201ENST00000548097 KCNQ3O43525 872 aa22.36■■□□□ 1.17
KRT4-201ENST00000548097 MRC1P22897 1456 aa22.36■■□□□ 1.17
KRT4-201ENST00000548097 BTBD11A6QL63 1104 aa22.36■■□□□ 1.17
KRT4-201ENST00000548097 SLFN5Q08AF3 891 aa22.35■■□□□ 1.17
KRT4-201ENST00000548097 CFAP44Q96MT7 982 aa22.35■■□□□ 1.17
KRT4-201ENST00000548097 MBIPQ9NS73 344 aa22.35■■□□□ 1.17
KRT4-201ENST00000548097 ZNF853P0CG23 659 aa22.34■■□□□ 1.17
KRT4-201ENST00000548097 CALD1Q05682 793 aaKnown RBP22.34■■□□□ 1.17
KRT4-201ENST00000548097 IFT57Q9NWB7 429 aa22.34■■□□□ 1.17
KRT4-201ENST00000548097 TSPYL4Q9UJ04 414 aa22.34■■□□□ 1.17
KRT4-201ENST00000548097 FAM196AQ6ZSG2 479 aa22.34■■□□□ 1.17
KRT4-201ENST00000548097 SBF2Q86WG5 1849 aa22.33■■□□□ 1.17
KRT4-201ENST00000548097 CHL1O00533 1208 aa22.33■■□□□ 1.16
KRT4-201ENST00000548097 GNAI1P63096 354 aa22.33■■□□□ 1.16
KRT4-201ENST00000548097 FANCIQ9NVI1 1328 aa22.33■■□□□ 1.16
KRT4-201ENST00000548097 BCL9O00512 1426 aa22.32■■□□□ 1.16
KRT4-201ENST00000548097 TRIM37O94972 964 aa22.32■■□□□ 1.16
KRT4-201ENST00000548097 ASAP1Q9ULH1 1129 aa22.32■■□□□ 1.16
KRT4-201ENST00000548097 IL16Q14005 1332 aa22.32■■□□□ 1.16
KRT4-201ENST00000548097 KRT24Q2M2I5 525 aa22.31■■□□□ 1.16
KRT4-201ENST00000548097 E9PSI1 815 aa22.31■■□□□ 1.16
KRT4-201ENST00000548097 DUSP27Q5VZP5 1158 aa22.3■■□□□ 1.16
KRT4-201ENST00000548097 NHSQ6T4R5 1651 aa22.3■■□□□ 1.16
KRT4-201ENST00000548097 ATG3Q9NT62 314 aa22.29■■□□□ 1.16
KRT4-201ENST00000548097 KDM3BQ7LBC6 1761 aa22.29■■□□□ 1.16
KRT4-201ENST00000548097 ZNF790Q6PG37 636 aa22.29■■□□□ 1.16
KRT4-201ENST00000548097 ELL2O00472 640 aaPredicted RBP22.28■■□□□ 1.16
KRT4-201ENST00000548097 TRMT2AQ8IZ69 625 aaKnown RBP22.28■■□□□ 1.16
KRT4-201ENST00000548097 MYH16Q9H6N6 1097 aa22.28■■□□□ 1.16
KRT4-201ENST00000548097 PTCD1O75127 700 aaKnown RBP22.27■■□□□ 1.16
KRT4-201ENST00000548097 BTAF1O14981 1849 aa22.27■■□□□ 1.16
KRT4-201ENST00000548097 EXOSC9Q06265 439 aaKnown RBP22.27■■□□□ 1.15
KRT4-201ENST00000548097 TTC5Q8N0Z6 440 aa22.26■■□□□ 1.15
KRT4-201ENST00000548097 TSPYL6Q8N831 410 aa22.25■■□□□ 1.15
KRT4-201ENST00000548097 C8orf58Q8NAV2 365 aa22.25■■□□□ 1.15
KRT4-201ENST00000548097 ZNF496Q96IT1 587 aaPredicted RBP22.25■■□□□ 1.15
KRT4-201ENST00000548097 BCL11BQ9C0K0 894 aaPredicted RBP22.25■■□□□ 1.15
KRT4-201ENST00000548097 PAPPAQ13219 1627 aa22.25■■□□□ 1.15
KRT4-201ENST00000548097 PRAMEF22A3QJZ6 481 aa22.24■■□□□ 1.15
KRT4-201ENST00000548097 EIF4A1P60842 406 aaKnown RBP22.24■■□□□ 1.15
KRT4-201ENST00000548097 RBM42Q9BTD8 480 aaKnown RBP22.24■■□□□ 1.15
KRT4-201ENST00000548097 BABAM1Q9NWV8 329 aa22.22■■□□□ 1.15
KRT4-201ENST00000548097 KCPQ6ZWJ8 1503 aa22.22■■□□□ 1.15
KRT4-201ENST00000548097 KCNQ4P56696 695 aa22.22■■□□□ 1.15
KRT4-201ENST00000548097 PALLDQ8WX93 1383 aa22.21■■□□□ 1.15
KRT4-201ENST00000548097 ILDR2Q71H61 639 aa22.21■■□□□ 1.15
KRT4-201ENST00000548097 UBR2Q8IWV8 1755 aa22.21■■□□□ 1.15
KRT4-201ENST00000548097 SLC4A9Q96Q91 983 aa22.2■■□□□ 1.14
KRT4-201ENST00000548097 APBA3O96018 575 aa22.19■■□□□ 1.14
KRT4-201ENST00000548097 NECTIN2Q92692 538 aa22.19■■□□□ 1.14
KRT4-201ENST00000548097 FMNL2Q96PY5 1086 aa22.19■■□□□ 1.14
KRT4-201ENST00000548097 TCERG1O14776 1098 aaKnown RBP22.17■■□□□ 1.14
KRT4-201ENST00000548097 TWISTNBQ3B726 338 aaPredicted RBP22.17■■□□□ 1.14
KRT4-201ENST00000548097 TNS1Q9HBL0 1735 aaKnown RBP22.17■■□□□ 1.14
KRT4-201ENST00000548097 C5P01031 1676 aa22.17■■□□□ 1.14
KRT4-201ENST00000548097 GIGYF1O75420 1035 aaPredicted RBP22.17■■□□□ 1.14
KRT4-201ENST00000548097 HEG1Q9ULI3 1381 aa22.16■■□□□ 1.14
KRT4-201ENST00000548097 USP16Q9Y5T5 823 aa22.16■■□□□ 1.14
KRT4-201ENST00000548097 LOC102724428A0A0B4J2F2 783 aa22.15■■□□□ 1.14
KRT4-201ENST00000548097 EIF2S2P20042 333 aaKnown RBP22.15■■□□□ 1.14
KRT4-201ENST00000548097 SIK1P57059 783 aa22.15■■□□□ 1.14
KRT4-201ENST00000548097 SMARCC1Q92922 1105 aaPredicted RBP22.15■■□□□ 1.14
KRT4-201ENST00000548097 VAMP4O75379 141 aa22.15■■□□□ 1.14
KRT4-201ENST00000548097 ATP6V1AP38606 617 aa22.15■■□□□ 1.14
KRT4-201ENST00000548097 DNAJC10Q8IXB1 793 aa22.15■■□□□ 1.14
KRT4-201ENST00000548097 ITPK1Q13572 414 aa22.13■■□□□ 1.13
KRT4-201ENST00000548097 SNRPA1P09661 255 aaKnown RBP22.13■■□□□ 1.13
KRT4-201ENST00000548097 PIP4K2AP48426 406 aaPredicted RBP22.13■■□□□ 1.13
KRT4-201ENST00000548097 BCL2L13Q9BXK5 485 aa22.13■■□□□ 1.13
KRT4-201ENST00000548097 CCNL1Q9UK58 526 aaPredicted RBP22.11■■□□□ 1.13
KRT4-201ENST00000548097 LY75O60449 1722 aa22.11■■□□□ 1.13
KRT4-201ENST00000548097 TJP1Q07157 1748 aa22.11■■□□□ 1.13
KRT4-201ENST00000548097 EN1Q05925 392 aaPredicted RBP22.1■■□□□ 1.13
KRT4-201ENST00000548097 DEFB132Q7Z7B7 95 aa22.1■■□□□ 1.13
KRT4-201ENST00000548097 PROM2Q8N271 834 aa22.1■■□□□ 1.13
KRT4-201ENST00000548097 LRRC4BQ9NT99 713 aa22.1■■□□□ 1.13
KRT4-201ENST00000548097 HDGFL1Q5TGJ6 251 aa22.1■■□□□ 1.13
KRT4-201ENST00000548097 ANXA1P04083 346 aa22.09■■□□□ 1.13
KRT4-201ENST00000548097 VSIG10Q8N0Z9 540 aa22.08■■□□□ 1.13
KRT4-201ENST00000548097 SF3B2Q13435 895 aaKnown RBP22.08■■□□□ 1.12
KRT4-201ENST00000548097 EZH2Q15910 746 aaKnown RBP22.08■■□□□ 1.12
KRT4-201ENST00000548097 TXNRD1Q16881 649 aa22.08■■□□□ 1.12
KRT4-201ENST00000548097 LINC00116Q8NCU8 138 aa22.08■■□□□ 1.12
KRT4-201ENST00000548097 PLSCR1O15162 318 aa22.07■■□□□ 1.12
KRT4-201ENST00000548097 BCAR3O75815 825 aa22.07■■□□□ 1.12
KRT4-201ENST00000548097 A1BGP04217 495 aa22.07■■□□□ 1.12
KRT4-201ENST00000548097 SSH1Q8WYL5 1049 aa22.06■■□□□ 1.12
KRT4-201ENST00000548097 CHPF2Q9P2E5 772 aa22.06■■□□□ 1.12
KRT4-201ENST00000548097 LAMB4A4D0S4 1761 aa22.06■■□□□ 1.12
KRT4-201ENST00000548097 CYP19A1P11511 503 aaPredicted RBP22.06■■□□□ 1.12
KRT4-201ENST00000548097 RARSP54136 660 aaKnown RBP22.06■■□□□ 1.12
KRT4-201ENST00000548097 PROSER3Q2NL68 480 aa22.06■■□□□ 1.12
KRT4-201ENST00000548097 RCAN3Q9UKA8 241 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms