RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 SSFA2P28290 1259 aa13.14□□□□□ -0.31
CDK4-205ENST00000547853 FSTL1Q12841 308 aa13.14□□□□□ -0.31
CDK4-205ENST00000547853 DLEC1Q9Y238 1755 aa13.14□□□□□ -0.31
CDK4-205ENST00000547853 FANCIQ9NVI1 1328 aa13.13□□□□□ -0.31
CDK4-205ENST00000547853 NCAPD2Q15021 1401 aa13.13□□□□□ -0.31
CDK4-205ENST00000547853 HNRNPUQ00839 825 aaKnown RBP eCLIP13.13□□□□□ -0.31
CDK4-205ENST00000547853 HDGFL2Q7Z4V5 671 aaPredicted RBP13.13□□□□□ -0.31
CDK4-205ENST00000547853 USHBP1Q8N6Y0 703 aa13.13□□□□□ -0.31
CDK4-205ENST00000547853 LINC00116Q8NCU8 138 aa13.13□□□□□ -0.31
CDK4-205ENST00000547853 RBM19Q9Y4C8 960 aaKnown RBP13.13□□□□□ -0.31
CDK4-205ENST00000547853 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
CDK4-205ENST00000547853 SLC34A2O95436 690 aa13.12□□□□□ -0.31
CDK4-205ENST00000547853 HMGB2P26583 209 aaKnown RBP13.12□□□□□ -0.31
CDK4-205ENST00000547853 NBPF6Q5VWK0 638 aa13.12□□□□□ -0.31
CDK4-205ENST00000547853 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
CDK4-205ENST00000547853 NBPF4Q96M43 638 aa13.12□□□□□ -0.31
CDK4-205ENST00000547853 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
CDK4-205ENST00000547853 ZBED9Q6R2W3 1325 aa13.12□□□□□ -0.31
CDK4-205ENST00000547853 MMP10P09238 476 aa13.11□□□□□ -0.31
CDK4-205ENST00000547853 MPRIPQ6WCQ1 1025 aa13.11□□□□□ -0.31
CDK4-205ENST00000547853 SLC12A5Q9H2X9 1139 aa13.11□□□□□ -0.31
CDK4-205ENST00000547853 BCS1LQ9Y276 419 aa13.11□□□□□ -0.31
CDK4-205ENST00000547853 CCDC88AQ3V6T2 1871 aa13.1□□□□□ -0.31
CDK4-205ENST00000547853 KDRP35968 1356 aa13.1□□□□□ -0.31
CDK4-205ENST00000547853 CYP27B1O15528 508 aa13.1□□□□□ -0.31
CDK4-205ENST00000547853 TMC1Q8TDI8 760 aa13.1□□□□□ -0.31
CDK4-205ENST00000547853 SMARCC1Q92922 1105 aaPredicted RBP13.1□□□□□ -0.31
CDK4-205ENST00000547853 PPP4R2Q9NY27 417 aa13.1□□□□□ -0.31
CDK4-205ENST00000547853 GNPATO15228 680 aa13.09□□□□□ -0.31
CDK4-205ENST00000547853 HSPA1AP0DMV8 641 aaKnown RBP13.09□□□□□ -0.31
CDK4-205ENST00000547853 HSPA1BP0DMV9 641 aaKnown RBP13.09□□□□□ -0.31
CDK4-205ENST00000547853 FBLN1P23142 703 aa13.09□□□□□ -0.31
CDK4-205ENST00000547853 C9orf131Q5VYM1 1079 aa13.09□□□□□ -0.31
CDK4-205ENST00000547853 C16orf71Q8IYS4 520 aaPredicted RBP13.09□□□□□ -0.31
CDK4-205ENST00000547853 RAPGEF4Q8WZA2 1011 aa13.09□□□□□ -0.31
CDK4-205ENST00000547853 TERF2IPQ9NYB0 399 aa13.09□□□□□ -0.31
CDK4-205ENST00000547853 ADAMTS7Q9UKP4 1686 aa13.08□□□□□ -0.31
CDK4-205ENST00000547853 LOC102724428A0A0B4J2F2 783 aa13.08□□□□□ -0.32
CDK4-205ENST00000547853 A0A0G2JLW4 131 aa13.08□□□□□ -0.32
CDK4-205ENST00000547853 AMPHP49418 695 aa13.08□□□□□ -0.32
CDK4-205ENST00000547853 SIK1P57059 783 aa13.08□□□□□ -0.32
CDK4-205ENST00000547853 TGFB2P61812 414 aa13.08□□□□□ -0.32
CDK4-205ENST00000547853 ITPK1Q13572 414 aa13.08□□□□□ -0.32
CDK4-205ENST00000547853 ARHGAP27Q6ZUM4 889 aa13.08□□□□□ -0.32
CDK4-205ENST00000547853 PRKRIP1Q9H875 184 aaPredicted RBP13.08□□□□□ -0.32
CDK4-205ENST00000547853 KDM6AO15550 1401 aaPredicted RBP13.07□□□□□ -0.32
CDK4-205ENST00000547853 DPEP1P16444 411 aa13.07□□□□□ -0.32
CDK4-205ENST00000547853 PIGBQ92521 554 aa13.07□□□□□ -0.32
CDK4-205ENST00000547853 COG3Q96JB2 828 aa13.07□□□□□ -0.32
CDK4-205ENST00000547853 TJP1Q07157 1748 aa13.07□□□□□ -0.32
CDK4-205ENST00000547853 KDM2BQ8NHM5 1336 aa13.07□□□□□ -0.32
CDK4-205ENST00000547853 INSRP06213 1382 aa13.07□□□□□ -0.32
CDK4-205ENST00000547853 AFDNP55196 1824 aaKnown RBP13.06□□□□□ -0.32
CDK4-205ENST00000547853 TATP17735 454 aaPredicted RBP13.06□□□□□ -0.32
CDK4-205ENST00000547853 FCHSD2O94868 740 aa13.05□□□□□ -0.32
CDK4-205ENST00000547853 RRS1Q15050 365 aaKnown RBP13.05□□□□□ -0.32
CDK4-205ENST00000547853 SMC1BQ8NDV3 1235 aa13.05□□□□□ -0.32
CDK4-205ENST00000547853 DCAF5Q96JK2 942 aa13.05□□□□□ -0.32
CDK4-205ENST00000547853 DICER1Q9UPY3 1922 aaKnown RBP13.05□□□□□ -0.32
CDK4-205ENST00000547853 FLT4P35916 1363 aa13.05□□□□□ -0.32
CDK4-205ENST00000547853 NRXN2Q9P2S2 1712 aa13.05□□□□□ -0.32
CDK4-205ENST00000547853 KCNA3P22001 575 aa13.04□□□□□ -0.32
CDK4-205ENST00000547853 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
CDK4-205ENST00000547853 CCDC87Q9NVE4 849 aa13.03□□□□□ -0.32
CDK4-205ENST00000547853 RNF181Q9P0P0 153 aa13.03□□□□□ -0.32
CDK4-205ENST00000547853 VIRMAQ69YN4 1812 aaKnown RBP13.03□□□□□ -0.32
CDK4-205ENST00000547853 KIF24Q5T7B8 1368 aa13.03□□□□□ -0.32
CDK4-205ENST00000547853 PUS7Q96PZ0 661 aaKnown RBP13.02□□□□□ -0.33
CDK4-205ENST00000547853 RRAGCQ9HB90 399 aa13.02□□□□□ -0.33
CDK4-205ENST00000547853 ZC3H4Q9UPT8 1303 aaKnown RBP13.02□□□□□ -0.33
CDK4-205ENST00000547853 GYS1P13807 737 aa13.01□□□□□ -0.33
CDK4-205ENST00000547853 HSP90AB2PQ58FF8 381 aa13.01□□□□□ -0.33
CDK4-205ENST00000547853 MRS2Q9HD23 443 aa13.01□□□□□ -0.33
CDK4-205ENST00000547853 ASAP1Q9ULH1 1129 aa13.01□□□□□ -0.33
CDK4-205ENST00000547853 KIF7Q2M1P5 1343 aa13□□□□□ -0.33
CDK4-205ENST00000547853 ATP6V1AP38606 617 aa13□□□□□ -0.33
CDK4-205ENST00000547853 TMF1P82094 1093 aa13□□□□□ -0.33
CDK4-205ENST00000547853 NLGN1Q8N2Q7 840 aa13□□□□□ -0.33
CDK4-205ENST00000547853 COL11A2P13942 1736 aaPredicted RBP12.99□□□□□ -0.33
CDK4-205ENST00000547853 CNTNAP4Q9C0A0 1308 aa12.99□□□□□ -0.33
CDK4-205ENST00000547853 ADRA2BP18089 450 aa12.99□□□□□ -0.33
CDK4-205ENST00000547853 TMOD3Q9NYL9 352 aa12.99□□□□□ -0.33
CDK4-205ENST00000547853 FER1L6Q2WGJ9 1857 aa12.98□□□□□ -0.33
CDK4-205ENST00000547853 ERICH6Q7L0X2 663 aa12.98□□□□□ -0.33
CDK4-205ENST00000547853 SLC4A9Q96Q91 983 aa12.98□□□□□ -0.33
CDK4-205ENST00000547853 CARD11Q9BXL7 1154 aa12.98□□□□□ -0.33
CDK4-205ENST00000547853 ATG3Q9NT62 314 aa12.98□□□□□ -0.33
CDK4-205ENST00000547853 PIM2Q9P1W9 311 aa12.98□□□□□ -0.33
CDK4-205ENST00000547853 RTCBQ9Y3I0 505 aaKnown RBP12.98□□□□□ -0.33
CDK4-205ENST00000547853 ANKRD31Q8N7Z5 1873 aa12.97□□□□□ -0.33
CDK4-205ENST00000547853 RASSF7Q02833 373 aa12.97□□□□□ -0.33
CDK4-205ENST00000547853 DDR1Q08345 913 aa12.97□□□□□ -0.33
CDK4-205ENST00000547853 DALRD3Q5D0E6 543 aaKnown RBP12.97□□□□□ -0.33
CDK4-205ENST00000547853 TRAPPC3LQ5T215 181 aa12.97□□□□□ -0.33
CDK4-205ENST00000547853 ARHGEF1Q92888 912 aaKnown RBP12.97□□□□□ -0.33
CDK4-205ENST00000547853 GGNBP2Q9H3C7 697 aa12.97□□□□□ -0.33
CDK4-205ENST00000547853 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
CDK4-205ENST00000547853 CACNA1SQ13698 1873 aa12.96□□□□□ -0.33
CDK4-205ENST00000547853 FYB1O15117 783 aa12.96□□□□□ -0.33
CDK4-205ENST00000547853 TESK2Q96S53 571 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms