RNA–Protein interactions for RNA: ENST00000547752.5

PTPRR-206, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,729 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-206ENST00000547752 UPF1Q92900 1129 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTPRR-206ENST00000547752 MRC1P22897 1456 aa12.68□□□□□ -0.38
PTPRR-206ENST00000547752 CABP4P57796 275 aa12.68□□□□□ -0.38
PTPRR-206ENST00000547752 NFATC2IPQ8NCF5 419 aa12.68□□□□□ -0.38
PTPRR-206ENST00000547752 SYTL4Q96C24 671 aaPredicted RBP12.68□□□□□ -0.38
PTPRR-206ENST00000547752 SLC52A2Q9HAB3 445 aa12.68□□□□□ -0.38
PTPRR-206ENST00000547752 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
PTPRR-206ENST00000547752 ITGB4P16144 1822 aa12.67□□□□□ -0.38
PTPRR-206ENST00000547752 NCBP3Q53F19 620 aaKnown RBP12.67□□□□□ -0.38
PTPRR-206ENST00000547752 TMOD3Q9NYL9 352 aa12.67□□□□□ -0.38
PTPRR-206ENST00000547752 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
PTPRR-206ENST00000547752 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
PTPRR-206ENST00000547752 CCDC27Q2M243 656 aa12.66□□□□□ -0.38
PTPRR-206ENST00000547752 SALL2Q9Y467 1007 aaPredicted RBP12.66□□□□□ -0.38
PTPRR-206ENST00000547752 TNS1Q9HBL0 1735 aaKnown RBP12.66□□□□□ -0.38
PTPRR-206ENST00000547752 KAT6BQ8WYB5 2073 aa12.65□□□□□ -0.38
PTPRR-206ENST00000547752 TEFQ10587 303 aa12.65□□□□□ -0.38
PTPRR-206ENST00000547752 WWC1Q8IX03 1113 aa12.65□□□□□ -0.38
PTPRR-206ENST00000547752 ATG3Q9NT62 314 aa12.65□□□□□ -0.38
PTPRR-206ENST00000547752 ASAP1Q9ULH1 1129 aa12.65□□□□□ -0.38
PTPRR-206ENST00000547752 BTAF1O14981 1849 aa12.65□□□□□ -0.39
PTPRR-206ENST00000547752 SIPA1L3O60292 1781 aaPredicted RBP12.64□□□□□ -0.39
PTPRR-206ENST00000547752 APBA3O96018 575 aa12.64□□□□□ -0.39
PTPRR-206ENST00000547752 CCDC125Q86Z20 511 aa12.64□□□□□ -0.39
PTPRR-206ENST00000547752 KCNQ3O43525 872 aa12.63□□□□□ -0.39
PTPRR-206ENST00000547752 CAPN15O75808 1086 aa12.63□□□□□ -0.39
PTPRR-206ENST00000547752 SLC39A6Q13433 755 aa12.63□□□□□ -0.39
PTPRR-206ENST00000547752 TAF7Q15545 349 aaPredicted RBP12.63□□□□□ -0.39
PTPRR-206ENST00000547752 MIS18AQ9NYP9 233 aa12.63□□□□□ -0.39
PTPRR-206ENST00000547752 ZNF521Q96K83 1311 aa12.62□□□□□ -0.39
PTPRR-206ENST00000547752 DEFB132Q7Z7B7 95 aa12.62□□□□□ -0.39
PTPRR-206ENST00000547752 PLSCR1O15162 318 aa12.62□□□□□ -0.39
PTPRR-206ENST00000547752 ZNF853P0CG23 659 aa12.62□□□□□ -0.39
PTPRR-206ENST00000547752 PROM2Q8N271 834 aa12.62□□□□□ -0.39
PTPRR-206ENST00000547752 NGEFQ8N5V2 710 aa12.62□□□□□ -0.39
PTPRR-206ENST00000547752 CAMKK2Q96RR4 588 aa12.62□□□□□ -0.39
PTPRR-206ENST00000547752 PALLDQ8WX93 1383 aa12.61□□□□□ -0.39
PTPRR-206ENST00000547752 BTBD11A6QL63 1104 aa12.61□□□□□ -0.39
PTPRR-206ENST00000547752 EN1Q05925 392 aaPredicted RBP12.61□□□□□ -0.39
PTPRR-206ENST00000547752 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
PTPRR-206ENST00000547752 U3KPZ7 1027 aaPredicted RBP12.61□□□□□ -0.39
PTPRR-206ENST00000547752 PAPPAQ13219 1627 aa12.61□□□□□ -0.39
PTPRR-206ENST00000547752 CHL1O00533 1208 aa12.6□□□□□ -0.39
PTPRR-206ENST00000547752 SF3B2Q13435 895 aaKnown RBP12.6□□□□□ -0.39
PTPRR-206ENST00000547752 EZH2Q15910 746 aaKnown RBP12.6□□□□□ -0.39
PTPRR-206ENST00000547752 SMARCC1Q92922 1105 aaPredicted RBP12.6□□□□□ -0.39
PTPRR-206ENST00000547752 EP400Q96L91 3159 aa12.6□□□□□ -0.39
PTPRR-206ENST00000547752 BAG6P46379 1132 aa12.59□□□□□ -0.39
PTPRR-206ENST00000547752 ZNF790Q6PG37 636 aa12.59□□□□□ -0.39
PTPRR-206ENST00000547752 WDR63Q8IWG1 891 aa12.59□□□□□ -0.39
PTPRR-206ENST00000547752 KCPQ6ZWJ8 1503 aa12.59□□□□□ -0.39
PTPRR-206ENST00000547752 IL16Q14005 1332 aa12.59□□□□□ -0.39
PTPRR-206ENST00000547752 KCNQ4P56696 695 aa12.59□□□□□ -0.39
PTPRR-206ENST00000547752 HNRNPUQ00839 825 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTPRR-206ENST00000547752 CFAP44Q96MT7 982 aa12.59□□□□□ -0.39
PTPRR-206ENST00000547752 IFT57Q9NWB7 429 aa12.59□□□□□ -0.39
PTPRR-206ENST00000547752 BABAM1Q9NWV8 329 aa12.59□□□□□ -0.39
PTPRR-206ENST00000547752 LAS1LQ9Y4W2 734 aaKnown RBP12.59□□□□□ -0.39
PTPRR-206ENST00000547752 SOCS7O14512 581 aa12.58□□□□□ -0.4
PTPRR-206ENST00000547752 PTCD1O75127 700 aaKnown RBP12.58□□□□□ -0.4
PTPRR-206ENST00000547752 TXNRD1Q16881 649 aa12.58□□□□□ -0.4
PTPRR-206ENST00000547752 ZNF496Q96IT1 587 aaPredicted RBP12.58□□□□□ -0.4
PTPRR-206ENST00000547752 LRRC4BQ9NT99 713 aa12.58□□□□□ -0.4
PTPRR-206ENST00000547752 TSPYL4Q9UJ04 414 aa12.58□□□□□ -0.4
PTPRR-206ENST00000547752 KDM3BQ7LBC6 1761 aa12.58□□□□□ -0.4
PTPRR-206ENST00000547752 LY75O60449 1722 aa12.58□□□□□ -0.4
PTPRR-206ENST00000547752 LOC102724428A0A0B4J2F2 783 aa12.57□□□□□ -0.4
PTPRR-206ENST00000547752 SIK1P57059 783 aa12.57□□□□□ -0.4
PTPRR-206ENST00000547752 EIF4A1P60842 406 aaKnown RBP12.57□□□□□ -0.4
PTPRR-206ENST00000547752 CALD1Q05682 793 aaKnown RBP12.57□□□□□ -0.4
PTPRR-206ENST00000547752 RBM42Q9BTD8 480 aaKnown RBP12.57□□□□□ -0.4
PTPRR-206ENST00000547752 MBIPQ9NS73 344 aa12.57□□□□□ -0.4
PTPRR-206ENST00000547752 UBR2Q8IWV8 1755 aa12.57□□□□□ -0.4
PTPRR-206ENST00000547752 GNAI1P63096 354 aa12.57□□□□□ -0.4
PTPRR-206ENST00000547752 ITPK1Q13572 414 aa12.57□□□□□ -0.4
PTPRR-206ENST00000547752 TTC5Q8N0Z6 440 aa12.57□□□□□ -0.4
PTPRR-206ENST00000547752 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
PTPRR-206ENST00000547752 RGPD3A6NKT7 1758 aaPredicted RBP12.56□□□□□ -0.4
PTPRR-206ENST00000547752 RGPD4Q7Z3J3 1758 aa12.56□□□□□ -0.4
PTPRR-206ENST00000547752 CCNL1Q9UK58 526 aaPredicted RBP12.56□□□□□ -0.4
PTPRR-206ENST00000547752 PRAMEF22A3QJZ6 481 aa12.55□□□□□ -0.4
PTPRR-206ENST00000547752 KRT24Q2M2I5 525 aa12.55□□□□□ -0.4
PTPRR-206ENST00000547752 SLC27A3Q5K4L6 730 aa12.55□□□□□ -0.4
PTPRR-206ENST00000547752 TSR2Q969E8 191 aaKnown RBP12.55□□□□□ -0.4
PTPRR-206ENST00000547752 CDCA7LQ96GN5 454 aa12.55□□□□□ -0.4
PTPRR-206ENST00000547752 FMNL2Q96PY5 1086 aa12.55□□□□□ -0.4
PTPRR-206ENST00000547752 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
PTPRR-206ENST00000547752 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
PTPRR-206ENST00000547752 DNAJC10Q8IXB1 793 aa12.54□□□□□ -0.4
PTPRR-206ENST00000547752 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
PTPRR-206ENST00000547752 LINC00116Q8NCU8 138 aa12.54□□□□□ -0.4
PTPRR-206ENST00000547752 RREB1Q92766 1687 aa12.54□□□□□ -0.4
PTPRR-206ENST00000547752 SLFN5Q08AF3 891 aa12.54□□□□□ -0.4
PTPRR-206ENST00000547752 TJP1Q07157 1748 aa12.53□□□□□ -0.4
PTPRR-206ENST00000547752 ZBED9Q6R2W3 1325 aa12.53□□□□□ -0.4
PTPRR-206ENST00000547752 FANCIQ9NVI1 1328 aa12.53□□□□□ -0.4
PTPRR-206ENST00000547752 ZNF831Q5JPB2 1677 aa12.53□□□□□ -0.4
PTPRR-206ENST00000547752 GIGYF1O75420 1035 aaPredicted RBP12.53□□□□□ -0.4
PTPRR-206ENST00000547752 TRMT2AQ8IZ69 625 aaKnown RBP12.53□□□□□ -0.4
PTPRR-206ENST00000547752 SNRPA1P09661 255 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms