RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 SPON1Q9HCB6 807 aa31.11■■■□□ 2.57
CTDSP2-203ENST00000547701 TUBGCP6Q96RT7 1819 aa31.1■■■□□ 2.57
CTDSP2-203ENST00000547701 PRKAR2BP31323 418 aa31.1■■■□□ 2.57
CTDSP2-203ENST00000547701 NFATC2IPQ8NCF5 419 aa31.1■■■□□ 2.57
CTDSP2-203ENST00000547701 SLC52A2Q9HAB3 445 aa31.1■■■□□ 2.57
CTDSP2-203ENST00000547701 KCNQ4P56696 695 aa31.09■■■□□ 2.57
CTDSP2-203ENST00000547701 COL24A1Q17RW2 1714 aa31.09■■■□□ 2.57
CTDSP2-203ENST00000547701 CICQ96RK0 1608 aaPredicted RBP31.09■■■□□ 2.57
CTDSP2-203ENST00000547701 PDGFDQ9GZP0 370 aaPredicted RBP31.08■■■□□ 2.57
CTDSP2-203ENST00000547701 LGR6Q9HBX8 967 aa31.08■■■□□ 2.57
CTDSP2-203ENST00000547701 C4BP0C0L5 1744 aa31.07■■■□□ 2.56
CTDSP2-203ENST00000547701 ZNF316A6NFI3 1004 aaPredicted RBP31.07■■■□□ 2.56
CTDSP2-203ENST00000547701 PHACTR3Q96KR7 559 aa31.07■■■□□ 2.56
CTDSP2-203ENST00000547701 PRKRIP1Q9H875 184 aaPredicted RBP31.07■■■□□ 2.56
CTDSP2-203ENST00000547701 MAP3K5Q99683 1374 aa31.06■■■□□ 2.56
CTDSP2-203ENST00000547701 PNPLA7Q6ZV29 1317 aa31.06■■■□□ 2.56
CTDSP2-203ENST00000547701 GNAT3A8MTJ3 354 aa31.06■■■□□ 2.56
CTDSP2-203ENST00000547701 MTFR1LQ9H019 292 aa31.06■■■□□ 2.56
CTDSP2-203ENST00000547701 TFCP2L1Q9NZI6 479 aa31.05■■■□□ 2.56
CTDSP2-203ENST00000547701 CEMIPQ8WUJ3 1361 aa31.05■■■□□ 2.56
CTDSP2-203ENST00000547701 FLAD1Q8NFF5 587 aa31.04■■■□□ 2.56
CTDSP2-203ENST00000547701 UBR3Q6ZT12 1888 aa31.03■■■□□ 2.56
CTDSP2-203ENST00000547701 HTATSF1O43719 755 aaKnown RBP31.02■■■□□ 2.56
CTDSP2-203ENST00000547701 IL17REQ8NFR9 667 aa31.02■■■□□ 2.56
CTDSP2-203ENST00000547701 SLC4A9Q96Q91 983 aa31.02■■■□□ 2.56
CTDSP2-203ENST00000547701 SGIP1Q9BQI5 828 aa31.02■■■□□ 2.56
CTDSP2-203ENST00000547701 PNNQ9H307 717 aaKnown RBP31.02■■■□□ 2.56
CTDSP2-203ENST00000547701 SIPA1L3O60292 1781 aaPredicted RBP31.02■■■□□ 2.56
CTDSP2-203ENST00000547701 ATP6V1AP38606 617 aa31.01■■■□□ 2.55
CTDSP2-203ENST00000547701 PLEKHF1Q96S99 279 aa31.01■■■□□ 2.55
CTDSP2-203ENST00000547701 PTGER2P43116 358 aa31■■■□□ 2.55
CTDSP2-203ENST00000547701 ITPK1Q13572 414 aa31■■■□□ 2.55
CTDSP2-203ENST00000547701 COL5A3P25940 1745 aaPredicted RBP31■■■□□ 2.55
CTDSP2-203ENST00000547701 RC3H1Q5TC82 1133 aaKnown RBP30.99■■■□□ 2.55
CTDSP2-203ENST00000547701 LINC00116Q8NCU8 138 aa30.99■■■□□ 2.55
CTDSP2-203ENST00000547701 ZBTB7AO95365 584 aa30.96■■■□□ 2.55
CTDSP2-203ENST00000547701 UBR2Q8IWV8 1755 aa30.96■■■□□ 2.55
CTDSP2-203ENST00000547701 SSFA2P28290 1259 aa30.95■■■□□ 2.55
CTDSP2-203ENST00000547701 COL23A1Q86Y22 540 aaPredicted RBP30.95■■■□□ 2.55
CTDSP2-203ENST00000547701 CNTNAP4Q9C0A0 1308 aa30.95■■■□□ 2.54
CTDSP2-203ENST00000547701 VSIG10Q8N0Z9 540 aa30.94■■■□□ 2.54
CTDSP2-203ENST00000547701 AK7Q96M32 723 aa30.94■■■□□ 2.54
CTDSP2-203ENST00000547701 MYH14Q7Z406 1995 aaKnown RBP30.94■■■□□ 2.54
CTDSP2-203ENST00000547701 RBM42Q9BTD8 480 aaKnown RBP30.93■■■□□ 2.54
CTDSP2-203ENST00000547701 NEFMP07197 916 aa30.92■■■□□ 2.54
CTDSP2-203ENST00000547701 TJP1Q07157 1748 aa30.92■■■□□ 2.54
CTDSP2-203ENST00000547701 KCPQ6ZWJ8 1503 aa30.92■■■□□ 2.54
CTDSP2-203ENST00000547701 DLG5Q8TDM6 1919 aa30.91■■■□□ 2.54
CTDSP2-203ENST00000547701 TEFQ10587 303 aa30.91■■■□□ 2.54
CTDSP2-203ENST00000547701 ATF5Q9Y2D1 282 aaPredicted RBP30.9■■■□□ 2.54
CTDSP2-203ENST00000547701 PTCD1O75127 700 aaKnown RBP30.89■■■□□ 2.54
CTDSP2-203ENST00000547701 ADRA2BP18089 450 aa30.88■■■□□ 2.53
CTDSP2-203ENST00000547701 RTF1Q92541 710 aaKnown RBP30.88■■■□□ 2.53
CTDSP2-203ENST00000547701 AMIGO3Q86WK7 504 aa30.87■■■□□ 2.53
CTDSP2-203ENST00000547701 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.86■■■□□ 2.53
CTDSP2-203ENST00000547701 RPS6KA4O75676 772 aa30.86■■■□□ 2.53
CTDSP2-203ENST00000547701 SLC39A6Q13433 755 aa30.86■■■□□ 2.53
CTDSP2-203ENST00000547701 NFE2L2Q16236 605 aa30.86■■■□□ 2.53
CTDSP2-203ENST00000547701 ZNF790Q6PG37 636 aa30.86■■■□□ 2.53
CTDSP2-203ENST00000547701 GNPATO15228 680 aa30.83■■■□□ 2.53
CTDSP2-203ENST00000547701 PPP1R1BQ9UD71 204 aaPredicted RBP30.83■■■□□ 2.53
CTDSP2-203ENST00000547701 RTCBQ9Y3I0 505 aaKnown RBP30.83■■■□□ 2.53
CTDSP2-203ENST00000547701 MAPK8IP3Q9UPT6 1336 aa30.82■■■□□ 2.52
CTDSP2-203ENST00000547701 TTC5Q8N0Z6 440 aa30.82■■■□□ 2.52
CTDSP2-203ENST00000547701 ARXQ96QS3 562 aa30.81■■■□□ 2.52
CTDSP2-203ENST00000547701 POLD1P28340 1107 aa30.8■■■□□ 2.52
CTDSP2-203ENST00000547701 CRKLP46109 303 aaKnown RBP30.8■■■□□ 2.52
CTDSP2-203ENST00000547701 TEX13AQ9BXU3 409 aaPredicted RBP30.8■■■□□ 2.52
CTDSP2-203ENST00000547701 BTBD11A6QL63 1104 aa30.79■■■□□ 2.52
CTDSP2-203ENST00000547701 CYP19A1P11511 503 aaPredicted RBP30.79■■■□□ 2.52
CTDSP2-203ENST00000547701 TRAPPC3LQ5T215 181 aa30.79■■■□□ 2.52
CTDSP2-203ENST00000547701 INTS5Q6P9B9 1019 aaKnown RBP30.79■■■□□ 2.52
CTDSP2-203ENST00000547701 MCM10Q7L590 875 aa30.79■■■□□ 2.52
CTDSP2-203ENST00000547701 HEG1Q9ULI3 1381 aa30.79■■■□□ 2.52
CTDSP2-203ENST00000547701 DNAJC10Q8IXB1 793 aa30.78■■■□□ 2.52
CTDSP2-203ENST00000547701 ZNF496Q96IT1 587 aaPredicted RBP30.78■■■□□ 2.52
CTDSP2-203ENST00000547701 WDR43Q15061 677 aaKnown RBP eCLIP30.77■■■□□ 2.52
CTDSP2-203ENST00000547701 TAF7Q15545 349 aaPredicted RBP30.77■■■□□ 2.52
CTDSP2-203ENST00000547701 FMNL2Q96PY5 1086 aa30.77■■■□□ 2.52
CTDSP2-203ENST00000547701 ADAMTS8Q9UP79 889 aa30.76■■■□□ 2.51
CTDSP2-203ENST00000547701 MSH5O43196 834 aa30.75■■■□□ 2.51
CTDSP2-203ENST00000547701 RUNDC1Q96C34 613 aa30.75■■■□□ 2.51
CTDSP2-203ENST00000547701 CCDC87Q9NVE4 849 aa30.75■■■□□ 2.51
CTDSP2-203ENST00000547701 TMPOP42166 694 aaKnown RBP30.74■■■□□ 2.51
CTDSP2-203ENST00000547701 DCTN1Q14203 1278 aa30.74■■■□□ 2.51
CTDSP2-203ENST00000547701 PNISRQ8TF01 805 aaKnown RBP30.74■■■□□ 2.51
CTDSP2-203ENST00000547701 ARHGEF1Q92888 912 aaKnown RBP30.74■■■□□ 2.51
CTDSP2-203ENST00000547701 C4AP0C0L4 1744 aa30.73■■■□□ 2.51
CTDSP2-203ENST00000547701 PHF14O94880 888 aa30.73■■■□□ 2.51
CTDSP2-203ENST00000547701 SYT17Q9BSW7 474 aa30.73■■■□□ 2.51
CTDSP2-203ENST00000547701 STARD3NLO95772 234 aa30.72■■■□□ 2.51
CTDSP2-203ENST00000547701 LMOD3Q0VAK6 560 aa30.71■■■□□ 2.51
CTDSP2-203ENST00000547701 FHDC1Q9C0D6 1143 aaPredicted RBP30.71■■■□□ 2.51
CTDSP2-203ENST00000547701 BABAM1Q9NWV8 329 aa30.71■■■□□ 2.51
CTDSP2-203ENST00000547701 KDM3BQ7LBC6 1761 aa30.71■■■□□ 2.51
CTDSP2-203ENST00000547701 SOS1Q07889 1333 aaPredicted RBP30.71■■■□□ 2.51
CTDSP2-203ENST00000547701 SMIM5Q71RC9 77 aa30.7■■■□□ 2.51
CTDSP2-203ENST00000547701 NLGN1Q8N2Q7 840 aa30.7■■■□□ 2.51
CTDSP2-203ENST00000547701 ANP32CO43423 234 aa30.69■■■□□ 2.5
CTDSP2-203ENST00000547701 RIPK4P57078 832 aa30.69■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms