RNA–Protein interactions for RNA: ENST00000547268.1

PRDM4-203, Transcript of PR/SET domain 4, humanhuman

TSL 5

Gene PRDM4, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-203ENST00000547268 MRC1P22897 1456 aa27.51■■□□□ 1.99
PRDM4-203ENST00000547268 SLC52A2Q9HAB3 445 aa27.5■■□□□ 1.99
PRDM4-203ENST00000547268 SCN11AQ9UI33 1791 aa27.5■■□□□ 1.99
PRDM4-203ENST00000547268 MAP3K5Q99683 1374 aa27.49■■□□□ 1.99
PRDM4-203ENST00000547268 SLC4A9Q96Q91 983 aa27.49■■□□□ 1.99
PRDM4-203ENST00000547268 PNPLA7Q6ZV29 1317 aa27.48■■□□□ 1.99
PRDM4-203ENST00000547268 GNAT3A8MTJ3 354 aa27.48■■□□□ 1.99
PRDM4-203ENST00000547268 ITPK1Q13572 414 aa27.48■■□□□ 1.99
PRDM4-203ENST00000547268 IL17REQ8NFR9 667 aa27.48■■□□□ 1.99
PRDM4-203ENST00000547268 SPON1Q9HCB6 807 aa27.48■■□□□ 1.99
PRDM4-203ENST00000547268 TFCP2L1Q9NZI6 479 aa27.48■■□□□ 1.99
PRDM4-203ENST00000547268 LINC00116Q8NCU8 138 aa27.46■■□□□ 1.99
PRDM4-203ENST00000547268 PLEKHF1Q96S99 279 aa27.46■■□□□ 1.99
PRDM4-203ENST00000547268 C5P01031 1676 aa27.46■■□□□ 1.99
PRDM4-203ENST00000547268 ZBTB7AO95365 584 aa27.45■■□□□ 1.98
PRDM4-203ENST00000547268 ATP6V1AP38606 617 aa27.45■■□□□ 1.98
PRDM4-203ENST00000547268 CEMIPQ8WUJ3 1361 aa27.44■■□□□ 1.98
PRDM4-203ENST00000547268 QSER1Q2KHR3 1735 aa27.44■■□□□ 1.98
PRDM4-203ENST00000547268 PTGER2P43116 358 aa27.43■■□□□ 1.98
PRDM4-203ENST00000547268 MTFR1LQ9H019 292 aa27.43■■□□□ 1.98
PRDM4-203ENST00000547268 TAF1LQ8IZX4 1826 aa27.43■■□□□ 1.98
PRDM4-203ENST00000547268 ZNF831Q5JPB2 1677 aa27.42■■□□□ 1.98
PRDM4-203ENST00000547268 C4BP0C0L5 1744 aa27.41■■□□□ 1.98
PRDM4-203ENST00000547268 AMIGO3Q86WK7 504 aa27.41■■□□□ 1.98
PRDM4-203ENST00000547268 SLC16A10Q8TF71 515 aa27.41■■□□□ 1.98
PRDM4-203ENST00000547268 SGIP1Q9BQI5 828 aa27.41■■□□□ 1.98
PRDM4-203ENST00000547268 RBM42Q9BTD8 480 aaKnown RBP27.41■■□□□ 1.98
PRDM4-203ENST00000547268 PPP1R1BQ9UD71 204 aaPredicted RBP27.41■■□□□ 1.98
PRDM4-203ENST00000547268 COL23A1Q86Y22 540 aaPredicted RBP27.4■■□□□ 1.98
PRDM4-203ENST00000547268 TUBGCP6Q96RT7 1819 aa27.39■■□□□ 1.98
PRDM4-203ENST00000547268 PTCD1O75127 700 aaKnown RBP27.39■■□□□ 1.98
PRDM4-203ENST00000547268 ATF5Q9Y2D1 282 aaPredicted RBP27.39■■□□□ 1.98
PRDM4-203ENST00000547268 SLC39A6Q13433 755 aa27.38■■□□□ 1.97
PRDM4-203ENST00000547268 HTATSF1O43719 755 aaKnown RBP27.37■■□□□ 1.97
PRDM4-203ENST00000547268 AK7Q96M32 723 aa27.37■■□□□ 1.97
PRDM4-203ENST00000547268 FLAD1Q8NFF5 587 aa27.36■■□□□ 1.97
PRDM4-203ENST00000547268 PNNQ9H307 717 aaKnown RBP27.36■■□□□ 1.97
PRDM4-203ENST00000547268 TEFQ10587 303 aa27.35■■□□□ 1.97
PRDM4-203ENST00000547268 RC3H1Q5TC82 1133 aaKnown RBP27.35■■□□□ 1.97
PRDM4-203ENST00000547268 KCPQ6ZWJ8 1503 aa27.35■■□□□ 1.97
PRDM4-203ENST00000547268 CNTNAP4Q9C0A0 1308 aa27.34■■□□□ 1.97
PRDM4-203ENST00000547268 CICQ96RK0 1608 aaPredicted RBP27.34■■□□□ 1.97
PRDM4-203ENST00000547268 VIRMAQ69YN4 1812 aaKnown RBP27.33■■□□□ 1.97
PRDM4-203ENST00000547268 SMIM5Q71RC9 77 aa27.33■■□□□ 1.97
PRDM4-203ENST00000547268 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.32■■□□□ 1.96
PRDM4-203ENST00000547268 SSFA2P28290 1259 aa27.32■■□□□ 1.96
PRDM4-203ENST00000547268 NFE2L2Q16236 605 aa27.32■■□□□ 1.96
PRDM4-203ENST00000547268 MCM10Q7L590 875 aa27.32■■□□□ 1.96
PRDM4-203ENST00000547268 RTF1Q92541 710 aaKnown RBP27.32■■□□□ 1.96
PRDM4-203ENST00000547268 GNPATO15228 680 aa27.31■■□□□ 1.96
PRDM4-203ENST00000547268 NEFMP07197 916 aa27.31■■□□□ 1.96
PRDM4-203ENST00000547268 SIPA1L3O60292 1781 aaPredicted RBP27.3■■□□□ 1.96
PRDM4-203ENST00000547268 DCTN1Q14203 1278 aa27.3■■□□□ 1.96
PRDM4-203ENST00000547268 ZNF790Q6PG37 636 aa27.3■■□□□ 1.96
PRDM4-203ENST00000547268 VSIG10Q8N0Z9 540 aa27.3■■□□□ 1.96
PRDM4-203ENST00000547268 COL5A3P25940 1745 aaPredicted RBP27.3■■□□□ 1.96
PRDM4-203ENST00000547268 UBR3Q6ZT12 1888 aa27.3■■□□□ 1.96
PRDM4-203ENST00000547268 TJP1Q07157 1748 aa27.29■■□□□ 1.96
PRDM4-203ENST00000547268 COL24A1Q17RW2 1714 aa27.29■■□□□ 1.96
PRDM4-203ENST00000547268 MAPK8IP3Q9UPT6 1336 aa27.28■■□□□ 1.96
PRDM4-203ENST00000547268 DNAJC10Q8IXB1 793 aa27.28■■□□□ 1.96
PRDM4-203ENST00000547268 ADAMTS8Q9UP79 889 aa27.28■■□□□ 1.96
PRDM4-203ENST00000547268 MSH5O43196 834 aa27.27■■□□□ 1.96
PRDM4-203ENST00000547268 RPS6KA4O75676 772 aa27.27■■□□□ 1.96
PRDM4-203ENST00000547268 PHF14O94880 888 aa27.27■■□□□ 1.96
PRDM4-203ENST00000547268 CRKLP46109 303 aaKnown RBP27.27■■□□□ 1.96
PRDM4-203ENST00000547268 ZNF496Q96IT1 587 aaPredicted RBP27.27■■□□□ 1.96
PRDM4-203ENST00000547268 BTBD11A6QL63 1104 aa27.26■■□□□ 1.95
PRDM4-203ENST00000547268 INTS5Q6P9B9 1019 aaKnown RBP27.26■■□□□ 1.95
PRDM4-203ENST00000547268 TTC5Q8N0Z6 440 aa27.26■■□□□ 1.95
PRDM4-203ENST00000547268 RTCBQ9Y3I0 505 aaKnown RBP27.26■■□□□ 1.95
PRDM4-203ENST00000547268 UBR2Q8IWV8 1755 aa27.26■■□□□ 1.95
PRDM4-203ENST00000547268 KCNQ3O43525 872 aa27.25■■□□□ 1.95
PRDM4-203ENST00000547268 CYP19A1P11511 503 aaPredicted RBP27.25■■□□□ 1.95
PRDM4-203ENST00000547268 WDR43Q15061 677 aaKnown RBP eCLIP27.25■■□□□ 1.95
PRDM4-203ENST00000547268 ADRA2BP18089 450 aa27.24■■□□□ 1.95
PRDM4-203ENST00000547268 CCDC184Q52MB2 194 aa27.23■■□□□ 1.95
PRDM4-203ENST00000547268 ARXQ96QS3 562 aa27.23■■□□□ 1.95
PRDM4-203ENST00000547268 HEG1Q9ULI3 1381 aa27.22■■□□□ 1.95
PRDM4-203ENST00000547268 TMPOP42166 694 aaKnown RBP27.22■■□□□ 1.95
PRDM4-203ENST00000547268 TAF7Q15545 349 aaPredicted RBP27.22■■□□□ 1.95
PRDM4-203ENST00000547268 TRAPPC3LQ5T215 181 aa27.22■■□□□ 1.95
PRDM4-203ENST00000547268 MYH14Q7Z406 1995 aaKnown RBP27.22■■□□□ 1.95
PRDM4-203ENST00000547268 DCAF8L1A6NGE4 600 aa27.21■■□□□ 1.95
PRDM4-203ENST00000547268 POLD1P28340 1107 aa27.21■■□□□ 1.95
PRDM4-203ENST00000547268 MSL1Q68DK7 614 aa27.21■■□□□ 1.95
PRDM4-203ENST00000547268 CCDC146Q8IYE0 955 aa27.21■■□□□ 1.95
PRDM4-203ENST00000547268 ARHGEF1Q92888 912 aaKnown RBP27.21■■□□□ 1.95
PRDM4-203ENST00000547268 RUNDC1Q96C34 613 aa27.21■■□□□ 1.95
PRDM4-203ENST00000547268 CCDC87Q9NVE4 849 aa27.21■■□□□ 1.95
PRDM4-203ENST00000547268 FMNL2Q96PY5 1086 aa27.2■■□□□ 1.94
PRDM4-203ENST00000547268 ANP32CO43423 234 aa27.19■■□□□ 1.94
PRDM4-203ENST00000547268 RIPK4P57078 832 aa27.19■■□□□ 1.94
PRDM4-203ENST00000547268 THUMPD2Q9BTF0 503 aaKnown RBP27.19■■□□□ 1.94
PRDM4-203ENST00000547268 FHDC1Q9C0D6 1143 aaPredicted RBP27.19■■□□□ 1.94
PRDM4-203ENST00000547268 DLG5Q8TDM6 1919 aa27.18■■□□□ 1.94
PRDM4-203ENST00000547268 SYT17Q9BSW7 474 aa27.17■■□□□ 1.94
PRDM4-203ENST00000547268 TEX13AQ9BXU3 409 aaPredicted RBP27.17■■□□□ 1.94
PRDM4-203ENST00000547268 SOS1Q07889 1333 aaPredicted RBP27.16■■□□□ 1.94
PRDM4-203ENST00000547268 YY1P25490 414 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms