RNA–Protein interactions for RNA: ENST00000547113.1

PRICKLE1-204, Transcript of prickle planar cell polarity protein 1, humanhuman

TSL 1 (best)

Gene PRICKLE1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-204ENST00000547113 RBM42Q9BTD8 480 aaKnown RBP24.23■■□□□ 1.47
PRICKLE1-204ENST00000547113 ARXQ96QS3 562 aa24.22■■□□□ 1.47
PRICKLE1-204ENST00000547113 LINC00116Q8NCU8 138 aa24.21■■□□□ 1.47
PRICKLE1-204ENST00000547113 LGR6Q9HBX8 967 aa24.21■■□□□ 1.47
PRICKLE1-204ENST00000547113 RNMTO43148 476 aaKnown RBP24.2■■□□□ 1.46
PRICKLE1-204ENST00000547113 ITPK1Q13572 414 aa24.2■■□□□ 1.46
PRICKLE1-204ENST00000547113 GAS2L2Q8NHY3 880 aa24.2■■□□□ 1.46
PRICKLE1-204ENST00000547113 DCAF8L1A6NGE4 600 aa24.19■■□□□ 1.46
PRICKLE1-204ENST00000547113 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
PRICKLE1-204ENST00000547113 SLC52A2Q9HAB3 445 aa24.19■■□□□ 1.46
PRICKLE1-204ENST00000547113 U2AF1L5P0DN76 240 aaPredicted RBP24.18■■□□□ 1.46
PRICKLE1-204ENST00000547113 U2AF1Q01081 240 aaKnown RBP eCLIP24.18■■□□□ 1.46
PRICKLE1-204ENST00000547113 DDX10Q13206 875 aaKnown RBP24.18■■□□□ 1.46
PRICKLE1-204ENST00000547113 SSFA2P28290 1259 aa24.17■■□□□ 1.46
PRICKLE1-204ENST00000547113 FHDC1Q9C0D6 1143 aaPredicted RBP24.17■■□□□ 1.46
PRICKLE1-204ENST00000547113 C5P01031 1676 aa24.16■■□□□ 1.46
PRICKLE1-204ENST00000547113 PTCD1O75127 700 aaKnown RBP24.16■■□□□ 1.46
PRICKLE1-204ENST00000547113 PHF14O94880 888 aa24.16■■□□□ 1.46
PRICKLE1-204ENST00000547113 PRKAR2BP31323 418 aa24.16■■□□□ 1.46
PRICKLE1-204ENST00000547113 SLC4A9Q96Q91 983 aa24.16■■□□□ 1.46
PRICKLE1-204ENST00000547113 RSPH6AQ9H0K4 717 aa24.16■■□□□ 1.46
PRICKLE1-204ENST00000547113 QSER1Q2KHR3 1735 aa24.15■■□□□ 1.46
PRICKLE1-204ENST00000547113 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.15■■□□□ 1.46
PRICKLE1-204ENST00000547113 GNPATO15228 680 aa24.15■■□□□ 1.46
PRICKLE1-204ENST00000547113 FCHSD2O94868 740 aa24.15■■□□□ 1.46
PRICKLE1-204ENST00000547113 SYT17Q9BSW7 474 aa24.15■■□□□ 1.46
PRICKLE1-204ENST00000547113 GNAT3A8MTJ3 354 aa24.14■■□□□ 1.45
PRICKLE1-204ENST00000547113 RC3H1Q5TC82 1133 aaKnown RBP24.14■■□□□ 1.45
PRICKLE1-204ENST00000547113 C4BP0C0L5 1744 aa24.13■■□□□ 1.45
PRICKLE1-204ENST00000547113 RALBP1Q15311 655 aa24.13■■□□□ 1.45
PRICKLE1-204ENST00000547113 AMIGO3Q86WK7 504 aa24.12■■□□□ 1.45
PRICKLE1-204ENST00000547113 PHACTR3Q96KR7 559 aa24.12■■□□□ 1.45
PRICKLE1-204ENST00000547113 RTCBQ9Y3I0 505 aaKnown RBP24.12■■□□□ 1.45
PRICKLE1-204ENST00000547113 MAP3K5Q99683 1374 aa24.12■■□□□ 1.45
PRICKLE1-204ENST00000547113 MSL1Q68DK7 614 aa24.11■■□□□ 1.45
PRICKLE1-204ENST00000547113 TEFQ10587 303 aa24.1■■□□□ 1.45
PRICKLE1-204ENST00000547113 TRAPPC3LQ5T215 181 aa24.1■■□□□ 1.45
PRICKLE1-204ENST00000547113 SMIM5Q71RC9 77 aa24.1■■□□□ 1.45
PRICKLE1-204ENST00000547113 CNTNAP4Q9C0A0 1308 aa24.1■■□□□ 1.45
PRICKLE1-204ENST00000547113 SLC39A6Q13433 755 aa24.09■■□□□ 1.45
PRICKLE1-204ENST00000547113 KLHL34Q8N239 644 aa24.09■■□□□ 1.45
PRICKLE1-204ENST00000547113 IL17REQ8NFR9 667 aa24.09■■□□□ 1.45
PRICKLE1-204ENST00000547113 TAF1LQ8IZX4 1826 aa24.09■■□□□ 1.45
PRICKLE1-204ENST00000547113 TUBGCP6Q96RT7 1819 aa24.08■■□□□ 1.45
PRICKLE1-204ENST00000547113 RPS6KA4O75676 772 aa24.07■■□□□ 1.44
PRICKLE1-204ENST00000547113 NEFMP07197 916 aa24.07■■□□□ 1.44
PRICKLE1-204ENST00000547113 ADRA2BP18089 450 aa24.07■■□□□ 1.44
PRICKLE1-204ENST00000547113 MRC1P22897 1456 aa24.07■■□□□ 1.44
PRICKLE1-204ENST00000547113 TTC5Q8N0Z6 440 aa24.06■■□□□ 1.44
PRICKLE1-204ENST00000547113 RTF1Q92541 710 aaKnown RBP24.06■■□□□ 1.44
PRICKLE1-204ENST00000547113 SCN11AQ9UI33 1791 aa24.06■■□□□ 1.44
PRICKLE1-204ENST00000547113 CRKLP46109 303 aaKnown RBP24.04■■□□□ 1.44
PRICKLE1-204ENST00000547113 PNNQ9H307 717 aaKnown RBP24.04■■□□□ 1.44
PRICKLE1-204ENST00000547113 ZNF831Q5JPB2 1677 aa24.04■■□□□ 1.44
PRICKLE1-204ENST00000547113 RFC4P35249 363 aa24.03■■□□□ 1.44
PRICKLE1-204ENST00000547113 DNAJC10Q8IXB1 793 aa24.03■■□□□ 1.44
PRICKLE1-204ENST00000547113 VSIG10Q8N0Z9 540 aa24.03■■□□□ 1.44
PRICKLE1-204ENST00000547113 ARHGEF1Q92888 912 aaKnown RBP24.03■■□□□ 1.44
PRICKLE1-204ENST00000547113 HTATSF1O43719 755 aaKnown RBP24.01■■□□□ 1.43
PRICKLE1-204ENST00000547113 CEMIPQ8WUJ3 1361 aa24.01■■□□□ 1.43
PRICKLE1-204ENST00000547113 ADAMTS7Q9UKP4 1686 aa24■■□□□ 1.43
PRICKLE1-204ENST00000547113 ZNF790Q6PG37 636 aa24■■□□□ 1.43
PRICKLE1-204ENST00000547113 NLGN1Q8N2Q7 840 aa24■■□□□ 1.43
PRICKLE1-204ENST00000547113 MYBBP1AQ9BQG0 1328 aaKnown RBP24■■□□□ 1.43
PRICKLE1-204ENST00000547113 UBR3Q6ZT12 1888 aa24■■□□□ 1.43
PRICKLE1-204ENST00000547113 COL24A1Q17RW2 1714 aa23.99■■□□□ 1.43
PRICKLE1-204ENST00000547113 INTS5Q6P9B9 1019 aaKnown RBP23.99■■□□□ 1.43
PRICKLE1-204ENST00000547113 CCDC87Q9NVE4 849 aa23.99■■□□□ 1.43
PRICKLE1-204ENST00000547113 BTBD11A6QL63 1104 aa23.98■■□□□ 1.43
PRICKLE1-204ENST00000547113 CYP19A1P11511 503 aaPredicted RBP23.98■■□□□ 1.43
PRICKLE1-204ENST00000547113 CD2APQ9Y5K6 639 aa23.98■■□□□ 1.43
PRICKLE1-204ENST00000547113 MCM10Q7L590 875 aa23.97■■□□□ 1.43
PRICKLE1-204ENST00000547113 TEX13AQ9BXU3 409 aaPredicted RBP23.97■■□□□ 1.43
PRICKLE1-204ENST00000547113 STARD3NLO95772 234 aa23.96■■□□□ 1.43
PRICKLE1-204ENST00000547113 GPR162Q16538 588 aa23.96■■□□□ 1.43
PRICKLE1-204ENST00000547113 NLGN2Q8NFZ4 835 aa23.96■■□□□ 1.43
PRICKLE1-204ENST00000547113 ZNF496Q96IT1 587 aaPredicted RBP23.96■■□□□ 1.43
PRICKLE1-204ENST00000547113 FMNL2Q96PY5 1086 aa23.96■■□□□ 1.43
PRICKLE1-204ENST00000547113 PLEKHF1Q96S99 279 aa23.96■■□□□ 1.43
PRICKLE1-204ENST00000547113 MAPK8IP3Q9UPT6 1336 aa23.95■■□□□ 1.42
PRICKLE1-204ENST00000547113 GYS1P13807 737 aa23.95■■□□□ 1.42
PRICKLE1-204ENST00000547113 KCPQ6ZWJ8 1503 aa23.94■■□□□ 1.42
PRICKLE1-204ENST00000547113 MMP10P09238 476 aa23.94■■□□□ 1.42
PRICKLE1-204ENST00000547113 COL5A3P25940 1745 aaPredicted RBP23.93■■□□□ 1.42
PRICKLE1-204ENST00000547113 DCTN1Q14203 1278 aa23.93■■□□□ 1.42
PRICKLE1-204ENST00000547113 HEG1Q9ULI3 1381 aa23.92■■□□□ 1.42
PRICKLE1-204ENST00000547113 NFE2L2Q16236 605 aa23.92■■□□□ 1.42
PRICKLE1-204ENST00000547113 PELP1Q8IZL8 1130 aaKnown RBP23.92■■□□□ 1.42
PRICKLE1-204ENST00000547113 PRKRIP1Q9H875 184 aaPredicted RBP23.92■■□□□ 1.42
PRICKLE1-204ENST00000547113 SOS1Q07889 1333 aaPredicted RBP23.91■■□□□ 1.42
PRICKLE1-204ENST00000547113 ZPR1O75312 459 aa23.91■■□□□ 1.42
PRICKLE1-204ENST00000547113 YY1P25490 414 aa23.91■■□□□ 1.42
PRICKLE1-204ENST00000547113 ZBTB1Q9Y2K1 713 aa23.91■■□□□ 1.42
PRICKLE1-204ENST00000547113 CICQ96RK0 1608 aaPredicted RBP23.91■■□□□ 1.42
PRICKLE1-204ENST00000547113 TJP1Q07157 1748 aa23.9■■□□□ 1.42
PRICKLE1-204ENST00000547113 USP42Q9H9J4 1324 aaKnown RBP23.9■■□□□ 1.42
PRICKLE1-204ENST00000547113 TAF7Q15545 349 aaPredicted RBP23.9■■□□□ 1.42
PRICKLE1-204ENST00000547113 SRP68Q9UHB9 627 aaKnown RBP23.9■■□□□ 1.42
PRICKLE1-204ENST00000547113 PARP3Q9Y6F1 533 aa23.9■■□□□ 1.42
PRICKLE1-204ENST00000547113 KCNQ3O43525 872 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms