RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 NGLY1Q96IV0 654 aa21.01■□□□□ 0.95
BRF1-208ENST00000546997 LGR6Q9HBX8 967 aa21.01■□□□□ 0.95
BRF1-208ENST00000546997 DISP2A7MBM2 1401 aa21.01■□□□□ 0.95
BRF1-208ENST00000546997 CYP27B1O15528 508 aa21.01■□□□□ 0.95
BRF1-208ENST00000546997 SIPA1L3O60292 1781 aaPredicted RBP21■□□□□ 0.95
BRF1-208ENST00000546997 EXOSC9Q06265 439 aaKnown RBP21■□□□□ 0.95
BRF1-208ENST00000546997 NPM2Q86SE8 214 aaKnown RBP21■□□□□ 0.95
BRF1-208ENST00000546997 TNKS1BP1Q9C0C2 1729 aaKnown RBP21■□□□□ 0.95
BRF1-208ENST00000546997 PHKG2P15735 406 aa20.99■□□□□ 0.95
BRF1-208ENST00000546997 MIS18AQ9NYP9 233 aa20.99■□□□□ 0.95
BRF1-208ENST00000546997 SPATA31A1Q5TZJ5 1347 aa20.99■□□□□ 0.95
BRF1-208ENST00000546997 KDM6AO15550 1401 aaPredicted RBP20.99■□□□□ 0.95
BRF1-208ENST00000546997 CHL1O00533 1208 aa20.99■□□□□ 0.95
BRF1-208ENST00000546997 BCAR3O75815 825 aa20.98■□□□□ 0.95
BRF1-208ENST00000546997 UNC5CLQ8IV45 518 aa20.97■□□□□ 0.95
BRF1-208ENST00000546997 FNBP4Q8N3X1 1017 aaPredicted RBP20.97■□□□□ 0.95
BRF1-208ENST00000546997 ZCRB1Q8TBF4 217 aaKnown RBP20.97■□□□□ 0.95
BRF1-208ENST00000546997 SPATA31A5Q5VU36 1347 aa20.97■□□□□ 0.95
BRF1-208ENST00000546997 SPATA31A7Q8IWB4 1347 aa20.97■□□□□ 0.95
BRF1-208ENST00000546997 RNMTO43148 476 aaKnown RBP20.96■□□□□ 0.95
BRF1-208ENST00000546997 IFNL2Q8IZJ0 200 aa20.96■□□□□ 0.95
BRF1-208ENST00000546997 KDM3BQ7LBC6 1761 aa20.96■□□□□ 0.95
BRF1-208ENST00000546997 PCDH11XQ9BZA7 1347 aa20.96■□□□□ 0.95
BRF1-208ENST00000546997 PCDH11YQ9BZA8 1340 aa20.96■□□□□ 0.95
BRF1-208ENST00000546997 MEX3CQ5U5Q3 659 aaKnown RBP20.96■□□□□ 0.95
BRF1-208ENST00000546997 UBE2Q2Q8WVN8 375 aa20.94■□□□□ 0.94
BRF1-208ENST00000546997 TSPYL4Q9UJ04 414 aa20.94■□□□□ 0.94
BRF1-208ENST00000546997 CCDC9Q9Y3X0 531 aaKnown RBP20.94■□□□□ 0.94
BRF1-208ENST00000546997 KRT24Q2M2I5 525 aa20.93■□□□□ 0.94
BRF1-208ENST00000546997 TSPYL6Q8N831 410 aa20.93■□□□□ 0.94
BRF1-208ENST00000546997 USP21Q9UK80 565 aa20.93■□□□□ 0.94
BRF1-208ENST00000546997 TOGARAM1Q9Y4F4 1720 aa20.92■□□□□ 0.94
BRF1-208ENST00000546997 TAF7Q15545 349 aaPredicted RBP20.92■□□□□ 0.94
BRF1-208ENST00000546997 C8orf58Q8NAV2 365 aa20.92■□□□□ 0.94
BRF1-208ENST00000546997 TEFQ10587 303 aa20.92■□□□□ 0.94
BRF1-208ENST00000546997 VPS72Q15906 364 aa20.92■□□□□ 0.94
BRF1-208ENST00000546997 DDX54Q8TDD1 881 aaKnown RBP20.92■□□□□ 0.94
BRF1-208ENST00000546997 MRC1P22897 1456 aa20.92■□□□□ 0.94
BRF1-208ENST00000546997 ELL2O00472 640 aaPredicted RBP20.91■□□□□ 0.94
BRF1-208ENST00000546997 RARSP54136 660 aaKnown RBP20.91■□□□□ 0.94
BRF1-208ENST00000546997 THRAP3Q9Y2W1 955 aaKnown RBP20.91■□□□□ 0.94
BRF1-208ENST00000546997 TNS2Q63HR2 1409 aa20.9■□□□□ 0.94
BRF1-208ENST00000546997 AFF2P51816 1311 aa20.9■□□□□ 0.94
BRF1-208ENST00000546997 CT47B1P0C2W7 299 aaPredicted RBP20.9■□□□□ 0.94
BRF1-208ENST00000546997 NFKBIBQ15653 356 aa20.9■□□□□ 0.94
BRF1-208ENST00000546997 DCAF5Q96JK2 942 aa20.9■□□□□ 0.94
BRF1-208ENST00000546997 KAT6BQ8WYB5 2073 aa20.9■□□□□ 0.94
BRF1-208ENST00000546997 BCL2L13Q9BXK5 485 aa20.9■□□□□ 0.94
BRF1-208ENST00000546997 VAMP4O75379 141 aa20.88■□□□□ 0.93
BRF1-208ENST00000546997 HSP90AB1P08238 724 aaKnown RBP20.88■□□□□ 0.93
BRF1-208ENST00000546997 PDE3AQ14432 1141 aa20.88■□□□□ 0.93
BRF1-208ENST00000546997 TWISTNBQ3B726 338 aaPredicted RBP20.88■□□□□ 0.93
BRF1-208ENST00000546997 BARGINQ6ZT62 677 aa20.88■□□□□ 0.93
BRF1-208ENST00000546997 GLI3P10071 1580 aa20.87■□□□□ 0.93
BRF1-208ENST00000546997 SLC52A2Q9HAB3 445 aa20.87■□□□□ 0.93
BRF1-208ENST00000546997 BABAM1Q9NWV8 329 aa20.87■□□□□ 0.93
BRF1-208ENST00000546997 BTBD11A6QL63 1104 aa20.86■□□□□ 0.93
BRF1-208ENST00000546997 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
BRF1-208ENST00000546997 CDCA7Q9BWT1 371 aaPredicted RBP20.86■□□□□ 0.93
BRF1-208ENST00000546997 ITGB4P16144 1822 aa20.86■□□□□ 0.93
BRF1-208ENST00000546997 KCNQ3O43525 872 aa20.86■□□□□ 0.93
BRF1-208ENST00000546997 FAM98CQ17RN3 349 aaKnown RBP20.86■□□□□ 0.93
BRF1-208ENST00000546997 NFATC2IPQ8NCF5 419 aa20.86■□□□□ 0.93
BRF1-208ENST00000546997 SSH1Q8WYL5 1049 aa20.86■□□□□ 0.93
BRF1-208ENST00000546997 KDM2BQ8NHM5 1336 aa20.85■□□□□ 0.93
BRF1-208ENST00000546997 EXOC5O00471 708 aa20.85■□□□□ 0.93
BRF1-208ENST00000546997 CENPQQ7L2Z9 268 aaPredicted RBP20.85■□□□□ 0.93
BRF1-208ENST00000546997 THSD7AQ9UPZ6 1657 aa20.84■□□□□ 0.93
BRF1-208ENST00000546997 DDB1Q16531 1140 aa20.83■□□□□ 0.93
BRF1-208ENST00000546997 ATRNO75882 1429 aa20.83■□□□□ 0.92
BRF1-208ENST00000546997 SMC4Q9NTJ3 1288 aa20.83■□□□□ 0.92
BRF1-208ENST00000546997 DOT1LQ8TEK3 1739 aa20.82■□□□□ 0.92
BRF1-208ENST00000546997 CANXP27824 592 aaKnown RBP20.82■□□□□ 0.92
BRF1-208ENST00000546997 CABP4P57796 275 aa20.81■□□□□ 0.92
BRF1-208ENST00000546997 EIF4A1P60842 406 aaKnown RBP20.81■□□□□ 0.92
BRF1-208ENST00000546997 FAM161AQ3B820 660 aa20.81■□□□□ 0.92
BRF1-208ENST00000546997 FAM43AQ8N2R8 423 aa20.81■□□□□ 0.92
BRF1-208ENST00000546997 FRAT1Q92837 279 aaPredicted RBP20.81■□□□□ 0.92
BRF1-208ENST00000546997 PAPPAQ13219 1627 aa20.81■□□□□ 0.92
BRF1-208ENST00000546997 SLC39A6Q13433 755 aa20.81■□□□□ 0.92
BRF1-208ENST00000546997 ZNF428Q96B54 188 aa20.81■□□□□ 0.92
BRF1-208ENST00000546997 ALDH1L2Q3SY69 923 aa20.8■□□□□ 0.92
BRF1-208ENST00000546997 GJD4Q96KN9 370 aaPredicted RBP20.8■□□□□ 0.92
BRF1-208ENST00000546997 BRPF3Q9ULD4 1205 aa20.8■□□□□ 0.92
BRF1-208ENST00000546997 ERVV-2B6SEH9 535 aa20.79■□□□□ 0.92
BRF1-208ENST00000546997 UBR2Q8IWV8 1755 aa20.79■□□□□ 0.92
BRF1-208ENST00000546997 C5P01031 1676 aa20.79■□□□□ 0.92
BRF1-208ENST00000546997 ZNF790Q6PG37 636 aa20.79■□□□□ 0.92
BRF1-208ENST00000546997 PANK1Q8TE04 598 aa20.79■□□□□ 0.92
BRF1-208ENST00000546997 TRPC5Q9UL62 973 aaPredicted RBP20.79■□□□□ 0.92
BRF1-208ENST00000546997 VSIG10Q8N0Z9 540 aa20.78■□□□□ 0.92
BRF1-208ENST00000546997 MARCH10Q8NA82 808 aaPredicted RBP20.78■□□□□ 0.92
BRF1-208ENST00000546997 CACNA1FO60840 1977 aa20.78■□□□□ 0.92
BRF1-208ENST00000546997 COG6Q9Y2V7 657 aa20.77■□□□□ 0.92
BRF1-208ENST00000546997 HEG1Q9ULI3 1381 aa20.77■□□□□ 0.91
BRF1-208ENST00000546997 A0A0G2JS52 829 aa20.76■□□□□ 0.91
BRF1-208ENST00000546997 MRPL50Q8N5N7 158 aaKnown RBP20.76■□□□□ 0.91
BRF1-208ENST00000546997 TNNQ9UQP3 1299 aa20.76■□□□□ 0.91
BRF1-208ENST00000546997 EP400Q96L91 3159 aa20.76■□□□□ 0.91
BRF1-208ENST00000546997 QTRT2Q9H974 415 aaKnown RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms