RNA–Protein interactions for RNA: ENST00000546281.5

LMO3-234, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 496 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-234ENST00000546281 SPINK5Q9NQ38 1064 aaPredicted RBP16.14■□□□□ 0.17
LMO3-234ENST00000546281 TMOD3Q9NYL9 352 aa16.14■□□□□ 0.17
LMO3-234ENST00000546281 GNAI1P63096 354 aa16.13■□□□□ 0.17
LMO3-234ENST00000546281 PTF1AQ7RTS3 328 aa16.13■□□□□ 0.17
LMO3-234ENST00000546281 BRWD3Q6RI45 1802 aa16.12■□□□□ 0.17
LMO3-234ENST00000546281 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
LMO3-234ENST00000546281 SLFN5Q08AF3 891 aa16.12■□□□□ 0.17
LMO3-234ENST00000546281 E9PSI1 815 aa16.11■□□□□ 0.17
LMO3-234ENST00000546281 SYTL4Q96C24 671 aaPredicted RBP16.11■□□□□ 0.17
LMO3-234ENST00000546281 ATG3Q9NT62 314 aa16.11■□□□□ 0.17
LMO3-234ENST00000546281 MIS18AQ9NYP9 233 aa16.11■□□□□ 0.17
LMO3-234ENST00000546281 DLG5Q8TDM6 1919 aa16.1■□□□□ 0.17
LMO3-234ENST00000546281 ZNF790Q6PG37 636 aa16.1■□□□□ 0.17
LMO3-234ENST00000546281 CDCA7LQ96GN5 454 aa16.1■□□□□ 0.17
LMO3-234ENST00000546281 MBIPQ9NS73 344 aa16.1■□□□□ 0.17
LMO3-234ENST00000546281 ASAP1Q9ULH1 1129 aa16.1■□□□□ 0.17
LMO3-234ENST00000546281 TOGARAM1Q9Y4F4 1720 aa16.1■□□□□ 0.17
LMO3-234ENST00000546281 SCN11AQ9UI33 1791 aa16.1■□□□□ 0.17
LMO3-234ENST00000546281 TRIM37O94972 964 aa16.09■□□□□ 0.17
LMO3-234ENST00000546281 YTHDC1Q96MU7 727 aaKnown RBP16.09■□□□□ 0.17
LMO3-234ENST00000546281 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
LMO3-234ENST00000546281 HEG1Q9ULI3 1381 aa16.09■□□□□ 0.17
LMO3-234ENST00000546281 KCNQ3O43525 872 aa16.08■□□□□ 0.16
LMO3-234ENST00000546281 SLC39A6Q13433 755 aa16.08■□□□□ 0.16
LMO3-234ENST00000546281 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
LMO3-234ENST00000546281 MYH16Q9H6N6 1097 aa16.08■□□□□ 0.16
LMO3-234ENST00000546281 EIF4A1P60842 406 aaKnown RBP16.07■□□□□ 0.16
LMO3-234ENST00000546281 DUSP27Q5VZP5 1158 aa16.07■□□□□ 0.16
LMO3-234ENST00000546281 LAS1LQ9Y4W2 734 aaKnown RBP16.07■□□□□ 0.16
LMO3-234ENST00000546281 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
LMO3-234ENST00000546281 PLSCR1O15162 318 aa16.06■□□□□ 0.16
LMO3-234ENST00000546281 ILDR2Q71H61 639 aa16.06■□□□□ 0.16
LMO3-234ENST00000546281 CCDC125Q86Z20 511 aa16.06■□□□□ 0.16
LMO3-234ENST00000546281 TSR2Q969E8 191 aaKnown RBP16.06■□□□□ 0.16
LMO3-234ENST00000546281 NHSQ6T4R5 1651 aa16.05■□□□□ 0.16
LMO3-234ENST00000546281 TTC5Q8N0Z6 440 aa16.05■□□□□ 0.16
LMO3-234ENST00000546281 VSIG10Q8N0Z9 540 aa16.05■□□□□ 0.16
LMO3-234ENST00000546281 ZNF496Q96IT1 587 aaPredicted RBP16.05■□□□□ 0.16
LMO3-234ENST00000546281 SIPA1L3O60292 1781 aaPredicted RBP16.05■□□□□ 0.16
LMO3-234ENST00000546281 DOT1LQ8TEK3 1739 aa16.05■□□□□ 0.16
LMO3-234ENST00000546281 FMNL2Q96PY5 1086 aa16.04■□□□□ 0.16
LMO3-234ENST00000546281 SLC4A9Q96Q91 983 aa16.04■□□□□ 0.16
LMO3-234ENST00000546281 PALLDQ8WX93 1383 aa16.03■□□□□ 0.16
LMO3-234ENST00000546281 GIGYF1O75420 1035 aaPredicted RBP16.03■□□□□ 0.16
LMO3-234ENST00000546281 KCPQ6ZWJ8 1503 aa16.03■□□□□ 0.16
LMO3-234ENST00000546281 SOS1Q07889 1333 aaPredicted RBP16.02■□□□□ 0.16
LMO3-234ENST00000546281 LOC102724428A0A0B4J2F2 783 aa16.02■□□□□ 0.16
LMO3-234ENST00000546281 APBA3O96018 575 aa16.02■□□□□ 0.16
LMO3-234ENST00000546281 HOXB7P09629 217 aa16.02■□□□□ 0.16
LMO3-234ENST00000546281 SIK1P57059 783 aa16.02■□□□□ 0.16
LMO3-234ENST00000546281 PROM2Q8N271 834 aa16.02■□□□□ 0.16
LMO3-234ENST00000546281 C8orf58Q8NAV2 365 aa16.02■□□□□ 0.16
LMO3-234ENST00000546281 SBF2Q86WG5 1849 aa16.01■□□□□ 0.15
LMO3-234ENST00000546281 PTCD1O75127 700 aaKnown RBP16.01■□□□□ 0.15
LMO3-234ENST00000546281 SNRPA1P09661 255 aaKnown RBP16.01■□□□□ 0.15
LMO3-234ENST00000546281 EXOSC9Q06265 439 aaKnown RBP16.01■□□□□ 0.15
LMO3-234ENST00000546281 PAPPAQ13219 1627 aa16.01■□□□□ 0.15
LMO3-234ENST00000546281 ITGB4P16144 1822 aa16.01■□□□□ 0.15
LMO3-234ENST00000546281 KRT24Q2M2I5 525 aa16■□□□□ 0.15
LMO3-234ENST00000546281 TSPYL6Q8N831 410 aa16■□□□□ 0.15
LMO3-234ENST00000546281 UPF1Q92900 1129 aaKnown RBP eCLIP16■□□□□ 0.15
LMO3-234ENST00000546281 CAMKK2Q96RR4 588 aa16■□□□□ 0.15
LMO3-234ENST00000546281 VAMP4O75379 141 aa15.99■□□□□ 0.15
LMO3-234ENST00000546281 CT47B1P0C2W7 299 aaPredicted RBP15.99■□□□□ 0.15
LMO3-234ENST00000546281 SLC27A3Q5K4L6 730 aa15.99■□□□□ 0.15
LMO3-234ENST00000546281 TEX13AQ9BXU3 409 aaPredicted RBP15.99■□□□□ 0.15
LMO3-234ENST00000546281 KDM3BQ7LBC6 1761 aa15.98■□□□□ 0.15
LMO3-234ENST00000546281 ITPK1Q13572 414 aa15.98■□□□□ 0.15
LMO3-234ENST00000546281 RBM42Q9BTD8 480 aaKnown RBP15.98■□□□□ 0.15
LMO3-234ENST00000546281 PRAMEF22A3QJZ6 481 aa15.97■□□□□ 0.15
LMO3-234ENST00000546281 ATP6V1AP38606 617 aa15.97■□□□□ 0.15
LMO3-234ENST00000546281 TXNRD1Q16881 649 aa15.97■□□□□ 0.15
LMO3-234ENST00000546281 TWISTNBQ3B726 338 aaPredicted RBP15.97■□□□□ 0.15
LMO3-234ENST00000546281 LRRC4BQ9NT99 713 aa15.97■□□□□ 0.15
LMO3-234ENST00000546281 USP16Q9Y5T5 823 aa15.97■□□□□ 0.15
LMO3-234ENST00000546281 BTAF1O14981 1849 aa15.96■□□□□ 0.15
LMO3-234ENST00000546281 UBR2Q8IWV8 1755 aa15.96■□□□□ 0.15
LMO3-234ENST00000546281 CYP19A1P11511 503 aaPredicted RBP15.96■□□□□ 0.15
LMO3-234ENST00000546281 HMGB2P26583 209 aaKnown RBP15.96■□□□□ 0.15
LMO3-234ENST00000546281 SF3B2Q13435 895 aaKnown RBP15.96■□□□□ 0.15
LMO3-234ENST00000546281 DNAJC10Q8IXB1 793 aa15.96■□□□□ 0.15
LMO3-234ENST00000546281 ZNF428Q96B54 188 aa15.96■□□□□ 0.15
LMO3-234ENST00000546281 CHMP4AQ9BY43 222 aa15.96■□□□□ 0.15
LMO3-234ENST00000546281 CCNL1Q9UK58 526 aaPredicted RBP15.96■□□□□ 0.15
LMO3-234ENST00000546281 VIRMAQ69YN4 1812 aaKnown RBP15.96■□□□□ 0.14
LMO3-234ENST00000546281 ELL2O00472 640 aaPredicted RBP15.95■□□□□ 0.14
LMO3-234ENST00000546281 BAG6P46379 1132 aa15.95■□□□□ 0.14
LMO3-234ENST00000546281 STARD3NLO95772 234 aa15.94■□□□□ 0.14
LMO3-234ENST00000546281 EN1Q05925 392 aaPredicted RBP15.94■□□□□ 0.14
LMO3-234ENST00000546281 RC3H1Q5TC82 1133 aaKnown RBP15.94■□□□□ 0.14
LMO3-234ENST00000546281 LINC00116Q8NCU8 138 aa15.94■□□□□ 0.14
LMO3-234ENST00000546281 ZNF831Q5JPB2 1677 aa15.94■□□□□ 0.14
LMO3-234ENST00000546281 TNS1Q9HBL0 1735 aaKnown RBP15.94■□□□□ 0.14
LMO3-234ENST00000546281 KCNQ4P56696 695 aa15.93■□□□□ 0.14
LMO3-234ENST00000546281 PDIA6Q15084 440 aa15.93■□□□□ 0.14
LMO3-234ENST00000546281 EZH2Q15910 746 aaKnown RBP15.93■□□□□ 0.14
LMO3-234ENST00000546281 DEFB132Q7Z7B7 95 aa15.93■□□□□ 0.14
LMO3-234ENST00000546281 ERBB4Q15303 1308 aa15.93■□□□□ 0.14
LMO3-234ENST00000546281 KAT6BQ8WYB5 2073 aa15.92■□□□□ 0.14
LMO3-234ENST00000546281 INTS5Q6P9B9 1019 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms