RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 BTBD11A6QL63 1104 aa14.38□□□□□ -0.11
NPC1L1-204ENST00000546276 ERLIN1O75477 346 aa14.38□□□□□ -0.11
NPC1L1-204ENST00000546276 TAF3Q5VWG9 929 aa14.38□□□□□ -0.11
NPC1L1-204ENST00000546276 ANO10Q9NW15 660 aa14.38□□□□□ -0.11
NPC1L1-204ENST00000546276 SDSP20132 328 aa14.38□□□□□ -0.11
NPC1L1-204ENST00000546276 CTNNA3Q9UI47 895 aa14.38□□□□□ -0.11
NPC1L1-204ENST00000546276 UBE2HP62256 183 aa14.37□□□□□ -0.11
NPC1L1-204ENST00000546276 TRIM22Q8IYM9 498 aa14.37□□□□□ -0.11
NPC1L1-204ENST00000546276 KIF18AQ8NI77 898 aa14.37□□□□□ -0.11
NPC1L1-204ENST00000546276 DDX19AQ9NUU7 478 aaKnown RBP14.37□□□□□ -0.11
NPC1L1-204ENST00000546276 CLIP2Q9UDT6 1046 aa14.37□□□□□ -0.11
NPC1L1-204ENST00000546276 SFPQP23246 707 aaKnown RBP eCLIP14.37□□□□□ -0.11
NPC1L1-204ENST00000546276 ITSN2Q9NZM3 1697 aa14.37□□□□□ -0.11
NPC1L1-204ENST00000546276 CDKL5O76039 1030 aa14.36□□□□□ -0.11
NPC1L1-204ENST00000546276 TNNT1P13805 278 aa14.36□□□□□ -0.11
NPC1L1-204ENST00000546276 RAPGEF6Q8TEU7 1601 aa14.36□□□□□ -0.11
NPC1L1-204ENST00000546276 EIF3JO75822 258 aaKnown RBP14.36□□□□□ -0.11
NPC1L1-204ENST00000546276 TXLNAP40222 546 aa14.36□□□□□ -0.11
NPC1L1-204ENST00000546276 ESCO1Q5FWF5 840 aa14.36□□□□□ -0.11
NPC1L1-204ENST00000546276 RRP12Q5JTH9 1297 aaKnown RBP14.36□□□□□ -0.11
NPC1L1-204ENST00000546276 CKAP2LQ8IYA6 745 aa14.36□□□□□ -0.11
NPC1L1-204ENST00000546276 CGNQ9P2M7 1197 aaKnown RBP14.36□□□□□ -0.11
NPC1L1-204ENST00000546276 MAGEC2Q9UBF1 373 aaPredicted RBP14.36□□□□□ -0.11
NPC1L1-204ENST00000546276 DDX54Q8TDD1 881 aaKnown RBP14.36□□□□□ -0.11
NPC1L1-204ENST00000546276 RBM42Q9BTD8 480 aaKnown RBP14.36□□□□□ -0.11
NPC1L1-204ENST00000546276 FYB1O15117 783 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 MYL6BP14649 208 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 SYTL4Q96C24 671 aaPredicted RBP14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 ZKSCAN5Q9Y2L8 839 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 NUP153P49790 1475 aaKnown RBP14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 CTTNBP2Q8WZ74 1663 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 EIF2AK4Q9P2K8 1649 aaKnown RBP14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 CTAGE5O15320 804 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 FLIIQ13045 1269 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 H0YHG0 523 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 NEMFO60524 1076 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 TATP17735 454 aaPredicted RBP14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 GJB2P29033 226 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 TAF7Q15545 349 aaPredicted RBP14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 C16orf45Q96MC5 204 aaPredicted RBP14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 ZMYND15Q9H091 742 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 TEX14Q8IWB6 1497 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 UHRF1BP1Q6BDS2 1440 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 HS1BP3Q53T59 392 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 TMCO3Q6UWJ1 677 aa14.35□□□□□ -0.11
NPC1L1-204ENST00000546276 HCLS1P14317 486 aaPredicted RBP14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 ZMYM4Q5VZL5 1548 aa14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 COL17A1Q9UMD9 1497 aaPredicted RBP14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 CFAP100Q494V2 611 aa14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 AXDND1Q5T1B0 1012 aaPredicted RBP14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 ADGRL1O94910 1474 aa14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 ANKRD44Q8N8A2 993 aa14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 ZNHIT6Q9NWK9 470 aaKnown RBP14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 PZPP20742 1482 aa14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 ERICH4A6NGS2 130 aa14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 OFD1O75665 1012 aa14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 MRPL50Q8N5N7 158 aaKnown RBP14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 LARP6Q9BRS8 491 aaKnown RBP14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 BOLA2Q9H3K6 86 aa14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 SPG7Q9UQ90 795 aa14.34□□□□□ -0.11
NPC1L1-204ENST00000546276 FKBP4Q02790 459 aaKnown RBP eCLIP14.33□□□□□ -0.11
NPC1L1-204ENST00000546276 PPP4R3BQ5MIZ7 849 aa14.33□□□□□ -0.11
NPC1L1-204ENST00000546276 INSRP06213 1382 aa14.33□□□□□ -0.12
NPC1L1-204ENST00000546276 ZSCAN25Q6NSZ9 544 aa14.33□□□□□ -0.12
NPC1L1-204ENST00000546276 ZBTB40Q9NUA8 1239 aa14.33□□□□□ -0.12
NPC1L1-204ENST00000546276 TSHZ3Q63HK5 1081 aa14.33□□□□□ -0.12
NPC1L1-204ENST00000546276 FAM83GA6ND36 823 aa14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 CCDC69A6NI79 296 aa14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 PRIM1P49642 420 aaKnown RBP14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 ANAPC15P60006 121 aa14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 KIF6Q6ZMV9 814 aa14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 CNNM1Q9NRU3 951 aa14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 ZSCAN22P10073 491 aaPredicted RBP14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 DNAAF4Q8WXU2 420 aa14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 U3KPZ7 1027 aaPredicted RBP14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 CEP126Q9P2H0 1117 aa14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 PATL2C9JE40 543 aaKnown RBP14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 RAD21O60216 631 aa14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 PDE1AP54750 535 aa14.32□□□□□ -0.12
NPC1L1-204ENST00000546276 WASLO00401 505 aaPredicted RBP14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 ZSCAN12O43309 604 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 NACAP1Q9BZK3 213 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 RRAGDQ9NQL2 400 aaPredicted RBP14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 ECHDC1Q9NTX5 307 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 NOLC1Q14978 699 aaKnown RBP eCLIP14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 EVI5LQ96CN4 794 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 ATF3P18847 181 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 MEIS3Q99687 375 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 DUOX2Q9NRD8 1548 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 CAVIN2O95810 425 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 HMGB1P09429 215 aaKnown RBP14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 EPS15P42566 896 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 ZNF165P49910 485 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 IDI1Q13907 227 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 IMMTQ16891 758 aaKnown RBP14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 CCDC57Q2TAC2 916 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 ESYT1Q9BSJ8 1104 aa14.31□□□□□ -0.12
NPC1L1-204ENST00000546276 GIMAP6Q6P9H5 292 aa14.3□□□□□ -0.12
NPC1L1-204ENST00000546276 TFIP11Q9UBB9 837 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms