RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 TMOD3Q9NYL9 352 aa14.1□□□□□ -0.15
PAAF1-216ENST00000546039 CICQ96RK0 1608 aaPredicted RBP14.1□□□□□ -0.15
PAAF1-216ENST00000546039 LAMB4A4D0S4 1761 aa14.09□□□□□ -0.15
PAAF1-216ENST00000546039 TAF1LQ8IZX4 1826 aa14.09□□□□□ -0.15
PAAF1-216ENST00000546039 ACSBG1Q96GR2 724 aa14.09□□□□□ -0.15
PAAF1-216ENST00000546039 SALL2Q9Y467 1007 aaPredicted RBP14.09□□□□□ -0.15
PAAF1-216ENST00000546039 SENP3-EIF4A1A0A087X0R7 540 aa14.08□□□□□ -0.16
PAAF1-216ENST00000546039 PRIM1P49642 420 aaKnown RBP14.08□□□□□ -0.16
PAAF1-216ENST00000546039 THUMPD2Q9BTF0 503 aaKnown RBP14.08□□□□□ -0.16
PAAF1-216ENST00000546039 IL16Q14005 1332 aa14.08□□□□□ -0.16
PAAF1-216ENST00000546039 ZNF521Q96K83 1311 aa14.08□□□□□ -0.16
PAAF1-216ENST00000546039 ILDR2Q71H61 639 aa14.07□□□□□ -0.16
PAAF1-216ENST00000546039 WDR63Q8IWG1 891 aa14.07□□□□□ -0.16
PAAF1-216ENST00000546039 SYTL4Q96C24 671 aaPredicted RBP14.07□□□□□ -0.16
PAAF1-216ENST00000546039 BCL11BQ9C0K0 894 aaPredicted RBP14.07□□□□□ -0.16
PAAF1-216ENST00000546039 ZBED9Q6R2W3 1325 aa14.07□□□□□ -0.16
PAAF1-216ENST00000546039 C5P01031 1676 aa14.07□□□□□ -0.16
PAAF1-216ENST00000546039 CACNA1FO60840 1977 aa14.06□□□□□ -0.16
PAAF1-216ENST00000546039 NFATC2IPQ8NCF5 419 aa14.06□□□□□ -0.16
PAAF1-216ENST00000546039 BABAM1Q9NWV8 329 aa14.06□□□□□ -0.16
PAAF1-216ENST00000546039 RREB1Q92766 1687 aa14.06□□□□□ -0.16
PAAF1-216ENST00000546039 COL5A3P25940 1745 aaPredicted RBP14.06□□□□□ -0.16
PAAF1-216ENST00000546039 TJP1Q07157 1748 aa14.06□□□□□ -0.16
PAAF1-216ENST00000546039 KCPQ6ZWJ8 1503 aa14.05□□□□□ -0.16
PAAF1-216ENST00000546039 KCNQ2O43526 872 aa14.05□□□□□ -0.16
PAAF1-216ENST00000546039 TRIM37O94972 964 aa14.05□□□□□ -0.16
PAAF1-216ENST00000546039 TAF7Q15545 349 aaPredicted RBP14.05□□□□□ -0.16
PAAF1-216ENST00000546039 PIGBQ92521 554 aa14.05□□□□□ -0.16
PAAF1-216ENST00000546039 IFT57Q9NWB7 429 aa14.05□□□□□ -0.16
PAAF1-216ENST00000546039 BTBD11A6QL63 1104 aa14.04□□□□□ -0.16
PAAF1-216ENST00000546039 GNAI1P63096 354 aa14.04□□□□□ -0.16
PAAF1-216ENST00000546039 GOLGA2Q08379 1002 aa14.03□□□□□ -0.16
PAAF1-216ENST00000546039 SMARCC1Q92922 1105 aaPredicted RBP14.03□□□□□ -0.16
PAAF1-216ENST00000546039 CFAP44Q96MT7 982 aa14.03□□□□□ -0.16
PAAF1-216ENST00000546039 PALLDQ8WX93 1383 aa14.02□□□□□ -0.17
PAAF1-216ENST00000546039 ZNF853P0CG23 659 aa14.02□□□□□ -0.17
PAAF1-216ENST00000546039 TTC5Q8N0Z6 440 aa14.02□□□□□ -0.17
PAAF1-216ENST00000546039 TSPYL4Q9UJ04 414 aa14.02□□□□□ -0.17
PAAF1-216ENST00000546039 NUP188Q5SRE5 1749 aa14.01□□□□□ -0.17
PAAF1-216ENST00000546039 E9PSI1 815 aa14.01□□□□□ -0.17
PAAF1-216ENST00000546039 CHL1O00533 1208 aa14.01□□□□□ -0.17
PAAF1-216ENST00000546039 SF3B2Q13435 895 aaKnown RBP14.01□□□□□ -0.17
PAAF1-216ENST00000546039 ZNF790Q6PG37 636 aa14.01□□□□□ -0.17
PAAF1-216ENST00000546039 PTF1AQ7RTS3 328 aa14.01□□□□□ -0.17
PAAF1-216ENST00000546039 CCDC125Q86Z20 511 aa14.01□□□□□ -0.17
PAAF1-216ENST00000546039 MYH16Q9H6N6 1097 aa14.01□□□□□ -0.17
PAAF1-216ENST00000546039 LAS1LQ9Y4W2 734 aaKnown RBP14.01□□□□□ -0.17
PAAF1-216ENST00000546039 SLC39A6Q13433 755 aa14□□□□□ -0.17
PAAF1-216ENST00000546039 YTHDC1Q96MU7 727 aaKnown RBP14□□□□□ -0.17
PAAF1-216ENST00000546039 ATG3Q9NT62 314 aa14□□□□□ -0.17
PAAF1-216ENST00000546039 ASAP1Q9ULH1 1129 aa14□□□□□ -0.17
PAAF1-216ENST00000546039 MBIPQ9NS73 344 aa13.99□□□□□ -0.17
PAAF1-216ENST00000546039 MYH14Q7Z406 1995 aaKnown RBP13.98□□□□□ -0.17
PAAF1-216ENST00000546039 FANCIQ9NVI1 1328 aa13.98□□□□□ -0.17
PAAF1-216ENST00000546039 PLSCR1O15162 318 aa13.98□□□□□ -0.17
PAAF1-216ENST00000546039 APBA3O96018 575 aa13.98□□□□□ -0.17
PAAF1-216ENST00000546039 SLFN5Q08AF3 891 aa13.98□□□□□ -0.17
PAAF1-216ENST00000546039 FMNL2Q96PY5 1086 aa13.98□□□□□ -0.17
PAAF1-216ENST00000546039 MIS18AQ9NYP9 233 aa13.98□□□□□ -0.17
PAAF1-216ENST00000546039 TUBGCP6Q96RT7 1819 aa13.98□□□□□ -0.17
PAAF1-216ENST00000546039 C4BP0C0L5 1744 aa13.98□□□□□ -0.17
PAAF1-216ENST00000546039 QSER1Q2KHR3 1735 aa13.98□□□□□ -0.17
PAAF1-216ENST00000546039 HEG1Q9ULI3 1381 aa13.97□□□□□ -0.17
PAAF1-216ENST00000546039 KCNQ3O43525 872 aa13.97□□□□□ -0.17
PAAF1-216ENST00000546039 BAG6P46379 1132 aa13.97□□□□□ -0.17
PAAF1-216ENST00000546039 SPINK5Q9NQ38 1064 aaPredicted RBP13.97□□□□□ -0.17
PAAF1-216ENST00000546039 UBR3Q6ZT12 1888 aa13.97□□□□□ -0.17
PAAF1-216ENST00000546039 LOC102724428A0A0B4J2F2 783 aa13.96□□□□□ -0.17
PAAF1-216ENST00000546039 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.17
PAAF1-216ENST00000546039 SIK1P57059 783 aa13.96□□□□□ -0.17
PAAF1-216ENST00000546039 EIF4A1P60842 406 aaKnown RBP13.96□□□□□ -0.17
PAAF1-216ENST00000546039 VSIG10Q8N0Z9 540 aa13.96□□□□□ -0.17
PAAF1-216ENST00000546039 TSR2Q969E8 191 aaKnown RBP13.96□□□□□ -0.17
PAAF1-216ENST00000546039 ZNF496Q96IT1 587 aaPredicted RBP13.96□□□□□ -0.17
PAAF1-216ENST00000546039 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
PAAF1-216ENST00000546039 SOS1Q07889 1333 aaPredicted RBP13.95□□□□□ -0.18
PAAF1-216ENST00000546039 HMGB2P26583 209 aaKnown RBP13.95□□□□□ -0.18
PAAF1-216ENST00000546039 SLC27A3Q5K4L6 730 aa13.95□□□□□ -0.18
PAAF1-216ENST00000546039 TRMT2AQ8IZ69 625 aaKnown RBP13.95□□□□□ -0.18
PAAF1-216ENST00000546039 UPF1Q92900 1129 aaKnown RBP eCLIP13.95□□□□□ -0.18
PAAF1-216ENST00000546039 CDCA7LQ96GN5 454 aa13.95□□□□□ -0.18
PAAF1-216ENST00000546039 HOXB7P09629 217 aa13.94□□□□□ -0.18
PAAF1-216ENST00000546039 DUSP27Q5VZP5 1158 aa13.94□□□□□ -0.18
PAAF1-216ENST00000546039 SNRPA1P09661 255 aaKnown RBP13.93□□□□□ -0.18
PAAF1-216ENST00000546039 ATP6V1AP38606 617 aa13.93□□□□□ -0.18
PAAF1-216ENST00000546039 TEX13AQ9BXU3 409 aaPredicted RBP13.93□□□□□ -0.18
PAAF1-216ENST00000546039 CCNL1Q9UK58 526 aaPredicted RBP13.93□□□□□ -0.18
PAAF1-216ENST00000546039 GIGYF1O75420 1035 aaPredicted RBP13.92□□□□□ -0.18
PAAF1-216ENST00000546039 TXNRD1Q16881 649 aa13.92□□□□□ -0.18
PAAF1-216ENST00000546039 SLC4A9Q96Q91 983 aa13.92□□□□□ -0.18
PAAF1-216ENST00000546039 CAMKK2Q96RR4 588 aa13.92□□□□□ -0.18
PAAF1-216ENST00000546039 C4AP0C0L4 1744 aa13.92□□□□□ -0.18
PAAF1-216ENST00000546039 EN1Q05925 392 aaPredicted RBP13.91□□□□□ -0.18
PAAF1-216ENST00000546039 EXOSC9Q06265 439 aaKnown RBP13.91□□□□□ -0.18
PAAF1-216ENST00000546039 CT47B1P0C2W7 299 aaPredicted RBP13.9□□□□□ -0.18
PAAF1-216ENST00000546039 ITPK1Q13572 414 aa13.9□□□□□ -0.18
PAAF1-216ENST00000546039 EZH2Q15910 746 aaKnown RBP13.9□□□□□ -0.18
PAAF1-216ENST00000546039 KRT24Q2M2I5 525 aa13.9□□□□□ -0.18
PAAF1-216ENST00000546039 TWISTNBQ3B726 338 aaPredicted RBP13.9□□□□□ -0.18
PAAF1-216ENST00000546039 DEFB132Q7Z7B7 95 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms