RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 ASAP1Q9ULH1 1129 aa23.14■■□□□ 1.29
CPSF7-225ENST00000545934 KDRP35968 1356 aa23.14■■□□□ 1.29
CPSF7-225ENST00000545934 MYH14Q7Z406 1995 aaKnown RBP23.13■■□□□ 1.29
CPSF7-225ENST00000545934 ATG3Q9NT62 314 aa23.12■■□□□ 1.29
CPSF7-225ENST00000545934 ATP6V1AP38606 617 aa23.1■■□□□ 1.29
CPSF7-225ENST00000545934 EIF4A2Q14240 407 aaKnown RBP23.1■■□□□ 1.29
CPSF7-225ENST00000545934 GPBP1L1Q9HC44 474 aaPredicted RBP23.1■■□□□ 1.29
CPSF7-225ENST00000545934 TIMELESSQ9UNS1 1208 aa23.1■■□□□ 1.29
CPSF7-225ENST00000545934 GNPATO15228 680 aa23.09■■□□□ 1.29
CPSF7-225ENST00000545934 ARFGEF1Q9Y6D6 1849 aa23.08■■□□□ 1.29
CPSF7-225ENST00000545934 PXDNLA1KZ92 1463 aa23.08■■□□□ 1.29
CPSF7-225ENST00000545934 VIRMAQ69YN4 1812 aaKnown RBP23.08■■□□□ 1.28
CPSF7-225ENST00000545934 SLC4A9Q96Q91 983 aa23.07■■□□□ 1.28
CPSF7-225ENST00000545934 TRIM26Q12899 539 aaPredicted RBP23.06■■□□□ 1.28
CPSF7-225ENST00000545934 SCN11AQ9UI33 1791 aa23.06■■□□□ 1.28
CPSF7-225ENST00000545934 TJP1Q07157 1748 aa23.05■■□□□ 1.28
CPSF7-225ENST00000545934 C10orf71Q711Q0 1435 aa23.05■■□□□ 1.28
CPSF7-225ENST00000545934 ERVV-2B6SEH9 535 aa23.04■■□□□ 1.28
CPSF7-225ENST00000545934 MMP10P09238 476 aa23.04■■□□□ 1.28
CPSF7-225ENST00000545934 WWC3Q9ULE0 1092 aa23.04■■□□□ 1.28
CPSF7-225ENST00000545934 KDM6AO15550 1401 aaPredicted RBP23.04■■□□□ 1.28
CPSF7-225ENST00000545934 HSPA6P17066 643 aa23.02■■□□□ 1.28
CPSF7-225ENST00000545934 RC3H1Q5TC82 1133 aaKnown RBP23.02■■□□□ 1.28
CPSF7-225ENST00000545934 ZNF526Q8TF50 670 aaPredicted RBP23.02■■□□□ 1.28
CPSF7-225ENST00000545934 ADAMTS7Q9UKP4 1686 aa23.02■■□□□ 1.28
CPSF7-225ENST00000545934 DCAF5Q96JK2 942 aa23.01■■□□□ 1.27
CPSF7-225ENST00000545934 RTCBQ9Y3I0 505 aaKnown RBP23.01■■□□□ 1.27
CPSF7-225ENST00000545934 CNTNAP4Q9C0A0 1308 aa23.01■■□□□ 1.27
CPSF7-225ENST00000545934 KIF3CO14782 793 aa23■■□□□ 1.27
CPSF7-225ENST00000545934 ADRA2BP18089 450 aa23■■□□□ 1.27
CPSF7-225ENST00000545934 TNNT2P45379 298 aaPredicted RBP23■■□□□ 1.27
CPSF7-225ENST00000545934 TGFB2P61812 414 aa23■■□□□ 1.27
CPSF7-225ENST00000545934 TRAPPC3LQ5T215 181 aa23■■□□□ 1.27
CPSF7-225ENST00000545934 IFFO2Q5TF58 517 aa23■■□□□ 1.27
CPSF7-225ENST00000545934 NLGN1Q8N2Q7 840 aa23■■□□□ 1.27
CPSF7-225ENST00000545934 HSP90AB1P08238 724 aaKnown RBP22.99■■□□□ 1.27
CPSF7-225ENST00000545934 ARHGEF1Q92888 912 aaKnown RBP22.99■■□□□ 1.27
CPSF7-225ENST00000545934 GYS1P13807 737 aa22.97■■□□□ 1.27
CPSF7-225ENST00000545934 PLEKHO1Q53GL0 409 aaPredicted RBP22.97■■□□□ 1.27
CPSF7-225ENST00000545934 CLSPNQ9HAW4 1339 aa22.97■■□□□ 1.27
CPSF7-225ENST00000545934 SBF1O95248 1867 aa22.96■■□□□ 1.27
CPSF7-225ENST00000545934 RPS6KA4O75676 772 aa22.96■■□□□ 1.27
CPSF7-225ENST00000545934 RBM42Q9BTD8 480 aaKnown RBP22.96■■□□□ 1.27
CPSF7-225ENST00000545934 AMOTQ4VCS5 1084 aa22.95■■□□□ 1.26
CPSF7-225ENST00000545934 A0A0G2JLW4 131 aa22.94■■□□□ 1.26
CPSF7-225ENST00000545934 ZNF530Q6P9A1 599 aaPredicted RBP22.94■■□□□ 1.26
CPSF7-225ENST00000545934 POLR3GLQ9BT43 218 aa22.93■■□□□ 1.26
CPSF7-225ENST00000545934 PANK3Q9H999 370 aa22.93■■□□□ 1.26
CPSF7-225ENST00000545934 AFDNP55196 1824 aaKnown RBP22.92■■□□□ 1.26
CPSF7-225ENST00000545934 AEBP1Q8IUX7 1158 aa22.92■■□□□ 1.26
CPSF7-225ENST00000545934 CCDC87Q9NVE4 849 aa22.92■■□□□ 1.26
CPSF7-225ENST00000545934 BCS1LQ9Y276 419 aa22.92■■□□□ 1.26
CPSF7-225ENST00000545934 DPEP1P16444 411 aa22.91■■□□□ 1.26
CPSF7-225ENST00000545934 KCNA3P22001 575 aa22.91■■□□□ 1.26
CPSF7-225ENST00000545934 RFC4P35249 363 aa22.91■■□□□ 1.26
CPSF7-225ENST00000545934 CABP4P57796 275 aa22.91■■□□□ 1.26
CPSF7-225ENST00000545934 DLEC1Q9Y238 1755 aa22.9■■□□□ 1.26
CPSF7-225ENST00000545934 WDR90Q96KV7 1748 aa22.89■■□□□ 1.26
CPSF7-225ENST00000545934 NRXN2Q9P2S2 1712 aa22.89■■□□□ 1.26
CPSF7-225ENST00000545934 MTHFSP49914 203 aa22.89■■□□□ 1.25
CPSF7-225ENST00000545934 PARP3Q9Y6F1 533 aa22.89■■□□□ 1.25
CPSF7-225ENST00000545934 HSPA5P11021 654 aaKnown RBP22.88■■□□□ 1.25
CPSF7-225ENST00000545934 EIF4G2P78344 907 aaKnown RBP eCLIP22.88■■□□□ 1.25
CPSF7-225ENST00000545934 NFATC2IPQ8NCF5 419 aa22.88■■□□□ 1.25
CPSF7-225ENST00000545934 USP42Q9H9J4 1324 aaKnown RBP22.87■■□□□ 1.25
CPSF7-225ENST00000545934 MRC1P22897 1456 aa22.87■■□□□ 1.25
CPSF7-225ENST00000545934 UBR2Q8IWV8 1755 aa22.87■■□□□ 1.25
CPSF7-225ENST00000545934 CRKLP46109 303 aaKnown RBP22.87■■□□□ 1.25
CPSF7-225ENST00000545934 PTCD1O75127 700 aaKnown RBP22.86■■□□□ 1.25
CPSF7-225ENST00000545934 TOMM70O94826 608 aa22.86■■□□□ 1.25
CPSF7-225ENST00000545934 C1orf141Q5JVX7 400 aa22.86■■□□□ 1.25
CPSF7-225ENST00000545934 ARHGAP27Q6ZUM4 889 aa22.86■■□□□ 1.25
CPSF7-225ENST00000545934 TNRC6CQ9HCJ0 1690 aaKnown RBP22.86■■□□□ 1.25
CPSF7-225ENST00000545934 FCHSD2O94868 740 aa22.85■■□□□ 1.25
CPSF7-225ENST00000545934 IL13P35225 146 aa22.85■■□□□ 1.25
CPSF7-225ENST00000545934 DDR1Q08345 913 aa22.85■■□□□ 1.25
CPSF7-225ENST00000545934 SULT6B1Q6IMI4 303 aa22.85■■□□□ 1.25
CPSF7-225ENST00000545934 SRP68Q9UHB9 627 aaKnown RBP22.85■■□□□ 1.25
CPSF7-225ENST00000545934 FKBP8Q14318 412 aa22.84■■□□□ 1.25
CPSF7-225ENST00000545934 MORC1Q86VD1 984 aa22.84■■□□□ 1.25
CPSF7-225ENST00000545934 CCDC88AQ3V6T2 1871 aa22.83■■□□□ 1.25
CPSF7-225ENST00000545934 INTS5Q6P9B9 1019 aaKnown RBP22.83■■□□□ 1.25
CPSF7-225ENST00000545934 KCPQ6ZWJ8 1503 aa22.82■■□□□ 1.24
CPSF7-225ENST00000545934 APLP1P51693 650 aa22.82■■□□□ 1.24
CPSF7-225ENST00000545934 NMRK2Q9NPI5 230 aa22.82■■□□□ 1.24
CPSF7-225ENST00000545934 PIM2Q9P1W9 311 aa22.82■■□□□ 1.24
CPSF7-225ENST00000545934 TM4SF1P30408 202 aa22.81■■□□□ 1.24
CPSF7-225ENST00000545934 AKAP4Q5JQC9 854 aa22.8■■□□□ 1.24
CPSF7-225ENST00000545934 DNAJC5GQ8N7S2 189 aa22.8■■□□□ 1.24
CPSF7-225ENST00000545934 SIPA1L3O60292 1781 aaPredicted RBP22.79■■□□□ 1.24
CPSF7-225ENST00000545934 POLRMTO00411 1230 aaKnown RBP22.79■■□□□ 1.24
CPSF7-225ENST00000545934 C9orf131Q5VYM1 1079 aa22.79■■□□□ 1.24
CPSF7-225ENST00000545934 DALRD3Q5D0E6 543 aaKnown RBP22.78■■□□□ 1.24
CPSF7-225ENST00000545934 SLC52A2Q9HAB3 445 aa22.78■■□□□ 1.24
CPSF7-225ENST00000545934 SOS1Q07889 1333 aaPredicted RBP22.78■■□□□ 1.24
CPSF7-225ENST00000545934 AMER1Q5JTC6 1135 aaPredicted RBP22.77■■□□□ 1.24
CPSF7-225ENST00000545934 DNAJC10Q8IXB1 793 aa22.77■■□□□ 1.24
CPSF7-225ENST00000545934 RBM46Q8TBY0 533 aaKnown RBP22.76■■□□□ 1.23
CPSF7-225ENST00000545934 PCGF6Q9BYE7 350 aa22.76■■□□□ 1.23
CPSF7-225ENST00000545934 LGR6Q9HBX8 967 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms