RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 FLT4P35916 1363 aa10.42□□□□□ -0.74
CLIP1-218ENST00000545889 FER1L4A9Z1Z3 1794 aa10.42□□□□□ -0.74
CLIP1-218ENST00000545889 NFXL1Q6ZNB6 911 aa10.42□□□□□ -0.74
CLIP1-218ENST00000545889 PIK3R4Q99570 1358 aa10.42□□□□□ -0.74
CLIP1-218ENST00000545889 ZKSCAN1P17029 563 aaPredicted RBP10.42□□□□□ -0.74
CLIP1-218ENST00000545889 NPC1L1Q9UHC9 1359 aa10.42□□□□□ -0.74
CLIP1-218ENST00000545889 C8orf37Q96NL8 207 aa10.42□□□□□ -0.74
CLIP1-218ENST00000545889 PTCD1O75127 700 aaKnown RBP10.41□□□□□ -0.74
CLIP1-218ENST00000545889 CNNM1Q9NRU3 951 aa10.41□□□□□ -0.74
CLIP1-218ENST00000545889 GNL3LQ9NVN8 582 aaKnown RBP10.41□□□□□ -0.74
CLIP1-218ENST00000545889 TBC1D2BQ9UPU7 963 aa10.41□□□□□ -0.74
CLIP1-218ENST00000545889 TMEM131LA2VDJ0 1609 aa10.41□□□□□ -0.74
CLIP1-218ENST00000545889 BTBD11A6QL63 1104 aa10.41□□□□□ -0.74
CLIP1-218ENST00000545889 HDGFL1Q5TGJ6 251 aa10.41□□□□□ -0.74
CLIP1-218ENST00000545889 SLC4A2P04920 1241 aa10.4□□□□□ -0.74
CLIP1-218ENST00000545889 IL13P35225 146 aa10.4□□□□□ -0.74
CLIP1-218ENST00000545889 IP6K1Q92551 441 aa10.4□□□□□ -0.74
CLIP1-218ENST00000545889 PTPRUQ92729 1446 aa10.4□□□□□ -0.74
CLIP1-218ENST00000545889 MPHOSPH8Q99549 860 aa10.4□□□□□ -0.74
CLIP1-218ENST00000545889 MTHFSDQ2M296 383 aaKnown RBP10.4□□□□□ -0.74
CLIP1-218ENST00000545889 ATP2B2Q01814 1243 aa10.4□□□□□ -0.74
CLIP1-218ENST00000545889 DUSP27Q5VZP5 1158 aa10.4□□□□□ -0.74
CLIP1-218ENST00000545889 RALYLQ86SE5 291 aaKnown RBP10.4□□□□□ -0.74
CLIP1-218ENST00000545889 NOB1Q9ULX3 412 aaKnown RBP10.4□□□□□ -0.74
CLIP1-218ENST00000545889 CEP170BQ9Y4F5 1589 aaPredicted RBP10.4□□□□□ -0.75
CLIP1-218ENST00000545889 TPD52L1Q16890 204 aaPredicted RBP10.4□□□□□ -0.75
CLIP1-218ENST00000545889 ZSCAN29Q8IWY8 852 aaPredicted RBP10.4□□□□□ -0.75
CLIP1-218ENST00000545889 TMOD2Q9NZR1 351 aa10.4□□□□□ -0.75
CLIP1-218ENST00000545889 ST18O60284 1047 aa10.39□□□□□ -0.75
CLIP1-218ENST00000545889 ZPR1O75312 459 aa10.39□□□□□ -0.75
CLIP1-218ENST00000545889 MCTP1Q6DN14 999 aa10.39□□□□□ -0.75
CLIP1-218ENST00000545889 SPINK5Q9NQ38 1064 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-218ENST00000545889 BTG4Q9NY30 223 aa10.39□□□□□ -0.75
CLIP1-218ENST00000545889 USP6P35125 1406 aa10.39□□□□□ -0.75
CLIP1-218ENST00000545889 UBTFL1P0CB47 393 aaPredicted RBP10.39□□□□□ -0.75
CLIP1-218ENST00000545889 TPM2P07951 284 aa10.38□□□□□ -0.75
CLIP1-218ENST00000545889 NBPF6Q5VWK0 638 aa10.38□□□□□ -0.75
CLIP1-218ENST00000545889 BRINP3Q76B58 766 aa10.38□□□□□ -0.75
CLIP1-218ENST00000545889 CCDC47Q96A33 483 aaKnown RBP10.38□□□□□ -0.75
CLIP1-218ENST00000545889 NBPF4Q96M43 638 aa10.38□□□□□ -0.75
CLIP1-218ENST00000545889 GBP4Q96PP9 640 aa10.38□□□□□ -0.75
CLIP1-218ENST00000545889 MYL6BP14649 208 aa10.38□□□□□ -0.75
CLIP1-218ENST00000545889 CSPP1Q1MSJ5 1256 aa10.38□□□□□ -0.75
CLIP1-218ENST00000545889 SIGLEC1Q9BZZ2 1709 aa10.38□□□□□ -0.75
CLIP1-218ENST00000545889 REREQ9P2R6 1566 aa10.38□□□□□ -0.75
CLIP1-218ENST00000545889 AMOTQ4VCS5 1084 aa10.38□□□□□ -0.75
CLIP1-218ENST00000545889 C20orf194Q5TEA3 1177 aa10.38□□□□□ -0.75
CLIP1-218ENST00000545889 SSH1Q8WYL5 1049 aa10.38□□□□□ -0.75
CLIP1-218ENST00000545889 RNF20Q5VTR2 975 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 TULP4Q9NRJ4 1543 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 EXOC5O00471 708 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 STARD3NLO95772 234 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 TTLL12Q14166 644 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-218ENST00000545889 TAF7Q15545 349 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-218ENST00000545889 TMEM132AQ24JP5 1023 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 KRT24Q2M2I5 525 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 CCDC30Q5VVM6 783 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 SYAP1Q96A49 352 aaPredicted RBP10.37□□□□□ -0.75
CLIP1-218ENST00000545889 SETBP1Q9Y6X0 1596 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 WWC2Q6AWC2 1192 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 BACH2Q9BYV9 841 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 MBIPQ9NS73 344 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 QRICH2Q9H0J4 1663 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 NRXN1Q9ULB1 1477 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 VGLL3A8MV65 326 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 ERC2O15083 957 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 C1orf115Q9H7X2 142 aa10.37□□□□□ -0.75
CLIP1-218ENST00000545889 ADGRB1O14514 1584 aa10.36□□□□□ -0.75
CLIP1-218ENST00000545889 PAF1Q8N7H5 531 aa10.36□□□□□ -0.75
CLIP1-218ENST00000545889 SBNO1A3KN83 1393 aa10.36□□□□□ -0.75
CLIP1-218ENST00000545889 SLC39A6Q13433 755 aa10.36□□□□□ -0.75
CLIP1-218ENST00000545889 ADGRL3Q9HAR2 1447 aa10.36□□□□□ -0.75
CLIP1-218ENST00000545889 ANXA1P04083 346 aa10.35□□□□□ -0.75
CLIP1-218ENST00000545889 SLC3A2P08195 630 aaKnown RBP10.35□□□□□ -0.75
CLIP1-218ENST00000545889 DDX19BQ9UMR2 479 aa10.35□□□□□ -0.75
CLIP1-218ENST00000545889 ATP7BP35670 1465 aa10.35□□□□□ -0.75
CLIP1-218ENST00000545889 MYO5BQ9ULV0 1848 aa10.35□□□□□ -0.75
CLIP1-218ENST00000545889 ESPNB1AK53 854 aa10.35□□□□□ -0.75
CLIP1-218ENST00000545889 IFT57Q9NWB7 429 aa10.35□□□□□ -0.75
CLIP1-218ENST00000545889 ZNF652Q9Y2D9 606 aa10.35□□□□□ -0.75
CLIP1-218ENST00000545889 RARSP54136 660 aaKnown RBP10.35□□□□□ -0.75
CLIP1-218ENST00000545889 IFNL2Q8IZJ0 200 aa10.35□□□□□ -0.75
CLIP1-218ENST00000545889 CLASRPQ8N2M8 674 aaKnown RBP10.35□□□□□ -0.75
CLIP1-218ENST00000545889 ZNF219Q9P2Y4 722 aaPredicted RBP10.35□□□□□ -0.75
CLIP1-218ENST00000545889 PPLO60437 1756 aa10.35□□□□□ -0.75
CLIP1-218ENST00000545889 SAFBQ15424 915 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLIP1-218ENST00000545889 TSR1Q2NL82 804 aaKnown RBP10.35□□□□□ -0.75
CLIP1-218ENST00000545889 TMOD3Q9NYL9 352 aa10.35□□□□□ -0.75
CLIP1-218ENST00000545889 SKAP1Q86WV1 359 aa10.34□□□□□ -0.75
CLIP1-218ENST00000545889 TPM3P06753 285 aa10.34□□□□□ -0.75
CLIP1-218ENST00000545889 ZCRB1Q8TBF4 217 aaKnown RBP10.34□□□□□ -0.75
CLIP1-218ENST00000545889 CLCN1P35523 988 aa10.34□□□□□ -0.75
CLIP1-218ENST00000545889 SART3Q15020 963 aaKnown RBP10.34□□□□□ -0.75
CLIP1-218ENST00000545889 ATF7IPQ6VMQ6 1270 aa10.33□□□□□ -0.76
CLIP1-218ENST00000545889 KIAA0232Q92628 1395 aa10.33□□□□□ -0.76
CLIP1-218ENST00000545889 NBPF14Q5TI25 921 aa10.33□□□□□ -0.76
CLIP1-218ENST00000545889 ACSBG1Q96GR2 724 aa10.33□□□□□ -0.76
CLIP1-218ENST00000545889 GNAI3P08754 354 aa10.33□□□□□ -0.76
CLIP1-218ENST00000545889 CCDC57Q2TAC2 916 aa10.33□□□□□ -0.76
CLIP1-218ENST00000545889 TSPYL6Q8N831 410 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms