RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 USHBP1Q8N6Y0 703 aa13.53□□□□□ -0.24
GABRB3-205ENST00000545868 NBPF4Q96M43 638 aa13.53□□□□□ -0.24
GABRB3-205ENST00000545868 ARXQ96QS3 562 aa13.53□□□□□ -0.24
GABRB3-205ENST00000545868 GGNBP2Q9H3C7 697 aa13.53□□□□□ -0.24
GABRB3-205ENST00000545868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.52□□□□□ -0.25
GABRB3-205ENST00000545868 AMPHP49418 695 aa13.52□□□□□ -0.25
GABRB3-205ENST00000545868 PRIM1P49642 420 aaKnown RBP13.52□□□□□ -0.25
GABRB3-205ENST00000545868 ZFP91Q96JP5 570 aaPredicted RBP13.52□□□□□ -0.25
GABRB3-205ENST00000545868 C4BP0C0L5 1744 aa13.52□□□□□ -0.25
GABRB3-205ENST00000545868 VIRMAQ69YN4 1812 aaKnown RBP13.52□□□□□ -0.25
GABRB3-205ENST00000545868 SLC27A3Q5K4L6 730 aa13.51□□□□□ -0.25
GABRB3-205ENST00000545868 ZCRB1Q8TBF4 217 aaKnown RBP13.51□□□□□ -0.25
GABRB3-205ENST00000545868 NCAPD2Q15021 1401 aa13.5□□□□□ -0.25
GABRB3-205ENST00000545868 ZNF784Q8NCA9 323 aaPredicted RBP13.5□□□□□ -0.25
GABRB3-205ENST00000545868 SYTL4Q96C24 671 aaPredicted RBP13.5□□□□□ -0.25
GABRB3-205ENST00000545868 INSRP06213 1382 aa13.48□□□□□ -0.25
GABRB3-205ENST00000545868 TMF1P82094 1093 aa13.48□□□□□ -0.25
GABRB3-205ENST00000545868 HSP90AB2PQ58FF8 381 aa13.48□□□□□ -0.25
GABRB3-205ENST00000545868 TSHZ2Q9NRE2 1034 aa13.48□□□□□ -0.25
GABRB3-205ENST00000545868 NSD3Q9BZ95 1437 aa13.47□□□□□ -0.25
GABRB3-205ENST00000545868 FLT4P35916 1363 aa13.47□□□□□ -0.25
GABRB3-205ENST00000545868 CEP350Q5VT06 3117 aa13.47□□□□□ -0.25
GABRB3-205ENST00000545868 SLC16A10Q8TF71 515 aa13.47□□□□□ -0.25
GABRB3-205ENST00000545868 CARD14Q9BXL6 1004 aa13.47□□□□□ -0.25
GABRB3-205ENST00000545868 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
GABRB3-205ENST00000545868 ZNF467Q7Z7K2 595 aaPredicted RBP13.46□□□□□ -0.25
GABRB3-205ENST00000545868 NLGN2Q8NFZ4 835 aa13.46□□□□□ -0.25
GABRB3-205ENST00000545868 TFCP2L1Q9NZI6 479 aa13.46□□□□□ -0.25
GABRB3-205ENST00000545868 CCNL1Q9UK58 526 aaPredicted RBP13.46□□□□□ -0.25
GABRB3-205ENST00000545868 STK24Q9Y6E0 443 aa13.46□□□□□ -0.25
GABRB3-205ENST00000545868 KIF24Q5T7B8 1368 aa13.45□□□□□ -0.26
GABRB3-205ENST00000545868 CGNL1Q0VF96 1302 aa13.45□□□□□ -0.26
GABRB3-205ENST00000545868 COL5A3P25940 1745 aaPredicted RBP13.45□□□□□ -0.26
GABRB3-205ENST00000545868 CYP27B1O15528 508 aa13.45□□□□□ -0.26
GABRB3-205ENST00000545868 EMILIN1Q9Y6C2 1016 aa13.45□□□□□ -0.26
GABRB3-205ENST00000545868 MYH14Q7Z406 1995 aaKnown RBP13.45□□□□□ -0.26
GABRB3-205ENST00000545868 KIAA1551Q9HCM1 1747 aa13.44□□□□□ -0.26
GABRB3-205ENST00000545868 KIF13BQ9NQT8 1826 aa13.44□□□□□ -0.26
GABRB3-205ENST00000545868 COL23A1Q86Y22 540 aaPredicted RBP13.44□□□□□ -0.26
GABRB3-205ENST00000545868 PCDH11XQ9BZA7 1347 aa13.43□□□□□ -0.26
GABRB3-205ENST00000545868 PCDH11YQ9BZA8 1340 aa13.43□□□□□ -0.26
GABRB3-205ENST00000545868 GTPBP6O43824 516 aaPredicted RBP13.43□□□□□ -0.26
GABRB3-205ENST00000545868 AMIGO3Q86WK7 504 aa13.43□□□□□ -0.26
GABRB3-205ENST00000545868 RAPGEF4Q8WZA2 1011 aa13.43□□□□□ -0.26
GABRB3-205ENST00000545868 BRCA1P38398 1863 aaKnown RBP13.42□□□□□ -0.26
GABRB3-205ENST00000545868 TATP17735 454 aaPredicted RBP13.42□□□□□ -0.26
GABRB3-205ENST00000545868 POLD1P28340 1107 aa13.42□□□□□ -0.26
GABRB3-205ENST00000545868 PCDHB8Q9UN66 801 aa13.42□□□□□ -0.26
GABRB3-205ENST00000545868 PCDHB13Q9Y5F0 798 aa13.42□□□□□ -0.26
GABRB3-205ENST00000545868 ZNF831Q5JPB2 1677 aa13.42□□□□□ -0.26
GABRB3-205ENST00000545868 N4BP2Q86UW6 1770 aaPredicted RBP13.42□□□□□ -0.26
GABRB3-205ENST00000545868 PALLDQ8WX93 1383 aa13.42□□□□□ -0.26
GABRB3-205ENST00000545868 C4AP0C0L4 1744 aa13.42□□□□□ -0.26
GABRB3-205ENST00000545868 TRIM26Q12899 539 aaPredicted RBP13.41□□□□□ -0.26
GABRB3-205ENST00000545868 MSL1Q68DK7 614 aa13.41□□□□□ -0.26
GABRB3-205ENST00000545868 YBX3P16989 372 aaKnown RBP eCLIP13.4□□□□□ -0.26
GABRB3-205ENST00000545868 GPR162Q16538 588 aa13.4□□□□□ -0.26
GABRB3-205ENST00000545868 POTEHQ6S545 545 aa13.4□□□□□ -0.26
GABRB3-205ENST00000545868 SCN11AQ9UI33 1791 aa13.4□□□□□ -0.26
GABRB3-205ENST00000545868 MPRIPQ6WCQ1 1025 aa13.39□□□□□ -0.27
GABRB3-205ENST00000545868 SMIM5Q71RC9 77 aa13.39□□□□□ -0.27
GABRB3-205ENST00000545868 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
GABRB3-205ENST00000545868 PDAP1Q13442 181 aaKnown RBP13.38□□□□□ -0.27
GABRB3-205ENST00000545868 CDCA8Q53HL2 280 aa13.38□□□□□ -0.27
GABRB3-205ENST00000545868 WASHC2AQ641Q2 1341 aa13.38□□□□□ -0.27
GABRB3-205ENST00000545868 PELP1Q8IZL8 1130 aaKnown RBP13.37□□□□□ -0.27
GABRB3-205ENST00000545868 PIGBQ92521 554 aa13.37□□□□□ -0.27
GABRB3-205ENST00000545868 EYA1Q99502 592 aa13.37□□□□□ -0.27
GABRB3-205ENST00000545868 POLKQ9UBT6 870 aa13.36□□□□□ -0.27
GABRB3-205ENST00000545868 TJP1Q07157 1748 aa13.36□□□□□ -0.27
GABRB3-205ENST00000545868 PPM1GO15355 546 aaPredicted RBP13.35□□□□□ -0.27
GABRB3-205ENST00000545868 LINC00116Q8NCU8 138 aa13.35□□□□□ -0.27
GABRB3-205ENST00000545868 KIF12Q96FN5 646 aa13.35□□□□□ -0.27
GABRB3-205ENST00000545868 CICQ96RK0 1608 aaPredicted RBP13.35□□□□□ -0.27
GABRB3-205ENST00000545868 C1QTNF8P60827 252 aa13.34□□□□□ -0.27
GABRB3-205ENST00000545868 ARFGEF1Q9Y6D6 1849 aa13.34□□□□□ -0.27
GABRB3-205ENST00000545868 KDRP35968 1356 aa13.33□□□□□ -0.27
GABRB3-205ENST00000545868 MAP3K13O43283 966 aa13.33□□□□□ -0.28
GABRB3-205ENST00000545868 EIF4A2Q14240 407 aaKnown RBP13.33□□□□□ -0.28
GABRB3-205ENST00000545868 IFNL1Q8IU54 200 aa13.33□□□□□ -0.28
GABRB3-205ENST00000545868 ADAMTS7Q9UKP4 1686 aa13.33□□□□□ -0.28
GABRB3-205ENST00000545868 LOC102724428A0A0B4J2F2 783 aa13.32□□□□□ -0.28
GABRB3-205ENST00000545868 PHF14O94880 888 aa13.32□□□□□ -0.28
GABRB3-205ENST00000545868 PHKG2P15735 406 aa13.32□□□□□ -0.28
GABRB3-205ENST00000545868 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
GABRB3-205ENST00000545868 PSEN1P49768 467 aa13.32□□□□□ -0.28
GABRB3-205ENST00000545868 SIK1P57059 783 aa13.32□□□□□ -0.28
GABRB3-205ENST00000545868 ITPK1Q13572 414 aa13.32□□□□□ -0.28
GABRB3-205ENST00000545868 SMARCC1Q92922 1105 aaPredicted RBP13.32□□□□□ -0.28
GABRB3-205ENST00000545868 ASAP1Q9ULH1 1129 aa13.32□□□□□ -0.28
GABRB3-205ENST00000545868 KDM6AO15550 1401 aaPredicted RBP13.31□□□□□ -0.28
GABRB3-205ENST00000545868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.31□□□□□ -0.28
GABRB3-205ENST00000545868 FLAD1Q8NFF5 587 aa13.31□□□□□ -0.28
GABRB3-205ENST00000545868 AK7Q96M32 723 aa13.31□□□□□ -0.28
GABRB3-205ENST00000545868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.31□□□□□ -0.28
GABRB3-205ENST00000545868 SPG7Q9UQ90 795 aa13.31□□□□□ -0.28
GABRB3-205ENST00000545868 CD2APQ9Y5K6 639 aa13.31□□□□□ -0.28
GABRB3-205ENST00000545868 IGSF1Q8N6C5 1336 aa13.31□□□□□ -0.28
GABRB3-205ENST00000545868 SBF1O95248 1867 aa13.31□□□□□ -0.28
GABRB3-205ENST00000545868 ADCY9O60503 1353 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms