RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 MYCBPQ99417 103 aaPredicted RBP8.19□□□□□ -1.1
NECAP1-208ENST00000545807 USP6P35125 1406 aa8.19□□□□□ -1.1
NECAP1-208ENST00000545807 MAP2P11137 1827 aaKnown RBP8.19□□□□□ -1.1
NECAP1-208ENST00000545807 IL13P35225 146 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 CT47A1Q5JQC4 288 aaPredicted RBP8.18□□□□□ -1.1
NECAP1-208ENST00000545807 NCAPGQ9BPX3 1015 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 GZF1Q9H116 711 aaPredicted RBP8.18□□□□□ -1.1
NECAP1-208ENST00000545807 CEP83Q9Y592 693 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 ZNF521Q96K83 1311 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 ZNF335Q9H4Z2 1342 aaPredicted RBP8.18□□□□□ -1.1
NECAP1-208ENST00000545807 EXOSC9Q06265 439 aaKnown RBP8.18□□□□□ -1.1
NECAP1-208ENST00000545807 PIAS4Q8N2W9 510 aaPredicted RBP8.18□□□□□ -1.1
NECAP1-208ENST00000545807 MIS18AQ9NYP9 233 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 KDM2BQ8NHM5 1336 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 DIP2AQ14689 1571 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 EP400NLQ6ZTU2 488 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 NBPF11Q86T75 865 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 GAS2L3Q86XJ1 694 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 PANK1Q8TE04 598 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 INSRP06213 1382 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 TMEM94Q12767 1356 aa8.18□□□□□ -1.1
NECAP1-208ENST00000545807 MFAP1P55081 439 aaKnown RBP8.17□□□□□ -1.1
NECAP1-208ENST00000545807 MCM10Q7L590 875 aa8.17□□□□□ -1.1
NECAP1-208ENST00000545807 PLEKHF1Q96S99 279 aa8.17□□□□□ -1.1
NECAP1-208ENST00000545807 RAI14Q9P0K7 980 aa8.17□□□□□ -1.1
NECAP1-208ENST00000545807 CALCOCO1Q9P1Z2 691 aa8.17□□□□□ -1.1
NECAP1-208ENST00000545807 TRIM35Q9UPQ4 493 aa8.17□□□□□ -1.1
NECAP1-208ENST00000545807 SLFN14P0C7P3 912 aa8.17□□□□□ -1.1
NECAP1-208ENST00000545807 NOP2P46087 812 aaKnown RBP8.17□□□□□ -1.1
NECAP1-208ENST00000545807 KRT28Q7Z3Y7 464 aa8.17□□□□□ -1.1
NECAP1-208ENST00000545807 FEZ2Q9UHY8 353 aaPredicted RBP8.17□□□□□ -1.1
NECAP1-208ENST00000545807 FCHSD2O94868 740 aa8.16□□□□□ -1.1
NECAP1-208ENST00000545807 SEMA3FQ13275 785 aa8.16□□□□□ -1.1
NECAP1-208ENST00000545807 TMEM132AQ24JP5 1023 aa8.16□□□□□ -1.1
NECAP1-208ENST00000545807 FEZ1Q99689 392 aa8.16□□□□□ -1.1
NECAP1-208ENST00000545807 C19orf44Q9H6X5 657 aa8.16□□□□□ -1.1
NECAP1-208ENST00000545807 PTCH1Q13635 1447 aa8.16□□□□□ -1.1
NECAP1-208ENST00000545807 CDC42BPGQ6DT37 1551 aa8.16□□□□□ -1.1
NECAP1-208ENST00000545807 LRRC59Q96AG4 307 aaKnown RBP8.16□□□□□ -1.1
NECAP1-208ENST00000545807 COG6Q9Y2V7 657 aa8.16□□□□□ -1.1
NECAP1-208ENST00000545807 RAD50Q92878 1312 aa8.16□□□□□ -1.1
NECAP1-208ENST00000545807 CCDC172P0C7W6 258 aa8.16□□□□□ -1.1
NECAP1-208ENST00000545807 IBTKQ9P2D0 1353 aaPredicted RBP8.15□□□□□ -1.1
NECAP1-208ENST00000545807 TTC36A6NLP5 189 aa8.15□□□□□ -1.1
NECAP1-208ENST00000545807 DDX11L8A8MPP1 907 aa8.15□□□□□ -1.1
NECAP1-208ENST00000545807 RBM25P49756 843 aaKnown RBP8.15□□□□□ -1.1
NECAP1-208ENST00000545807 MAP2K1Q02750 393 aaPredicted RBP8.15□□□□□ -1.1
NECAP1-208ENST00000545807 CHRNA2Q15822 529 aa8.15□□□□□ -1.1
NECAP1-208ENST00000545807 PRIMPOLQ96LW4 560 aa8.15□□□□□ -1.1
NECAP1-208ENST00000545807 SMC4Q9NTJ3 1288 aa8.15□□□□□ -1.1
NECAP1-208ENST00000545807 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.15□□□□□ -1.11
NECAP1-208ENST00000545807 HMGN5P82970 282 aaKnown RBP8.15□□□□□ -1.11
NECAP1-208ENST00000545807 KRT24Q2M2I5 525 aa8.15□□□□□ -1.11
NECAP1-208ENST00000545807 PDLIM2Q96JY6 352 aa8.15□□□□□ -1.11
NECAP1-208ENST00000545807 EYA1Q99502 592 aa8.15□□□□□ -1.11
NECAP1-208ENST00000545807 ZKSCAN5Q9Y2L8 839 aa8.15□□□□□ -1.11
NECAP1-208ENST00000545807 CTR9Q6PD62 1173 aa8.14□□□□□ -1.11
NECAP1-208ENST00000545807 PSMD1Q99460 953 aa8.14□□□□□ -1.11
NECAP1-208ENST00000545807 SLKQ9H2G2 1235 aaPredicted RBP8.14□□□□□ -1.11
NECAP1-208ENST00000545807 KIF16BQ96L93 1317 aa8.14□□□□□ -1.11
NECAP1-208ENST00000545807 SHPRHQ149N8 1683 aa8.14□□□□□ -1.11
NECAP1-208ENST00000545807 HSP90AB1P08238 724 aaKnown RBP8.14□□□□□ -1.11
NECAP1-208ENST00000545807 NFE2L2Q16236 605 aa8.14□□□□□ -1.11
NECAP1-208ENST00000545807 KIF20BQ96Q89 1820 aa8.14□□□□□ -1.11
NECAP1-208ENST00000545807 PIK3R4Q99570 1358 aa8.14□□□□□ -1.11
NECAP1-208ENST00000545807 KNDC1Q76NI1 1749 aa8.14□□□□□ -1.11
NECAP1-208ENST00000545807 NBPF9Q3BBW0 867 aa8.14□□□□□ -1.11
NECAP1-208ENST00000545807 NECTIN2Q92692 538 aa8.14□□□□□ -1.11
NECAP1-208ENST00000545807 CFAP44Q96MT7 982 aa8.14□□□□□ -1.11
NECAP1-208ENST00000545807 OGFRQ9NZT2 677 aa8.14□□□□□ -1.11
NECAP1-208ENST00000545807 TTC21AQ8NDW8 1320 aa8.13□□□□□ -1.11
NECAP1-208ENST00000545807 ITSN1Q15811 1721 aa8.13□□□□□ -1.11
NECAP1-208ENST00000545807 HOXC9P31274 260 aa8.13□□□□□ -1.11
NECAP1-208ENST00000545807 BRMS1Q9HCU9 246 aa8.13□□□□□ -1.11
NECAP1-208ENST00000545807 USP32Q8NFA0 1604 aa8.13□□□□□ -1.11
NECAP1-208ENST00000545807 ADGRL3Q9HAR2 1447 aa8.13□□□□□ -1.11
NECAP1-208ENST00000545807 OS9Q13438 667 aaPredicted RBP8.13□□□□□ -1.11
NECAP1-208ENST00000545807 WDR63Q8IWG1 891 aa8.13□□□□□ -1.11
NECAP1-208ENST00000545807 TSPYL6Q8N831 410 aa8.13□□□□□ -1.11
NECAP1-208ENST00000545807 PRDM16Q9HAZ2 1276 aa8.13□□□□□ -1.11
NECAP1-208ENST00000545807 GCP02774 474 aa8.12□□□□□ -1.11
NECAP1-208ENST00000545807 NASPP49321 788 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-208ENST00000545807 NBPF10Q6P3W6 841 aaKnown RBP8.12□□□□□ -1.11
NECAP1-208ENST00000545807 CREBRFQ8IUR6 639 aa8.12□□□□□ -1.11
NECAP1-208ENST00000545807 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-208ENST00000545807 RNF217Q8TC41 542 aa8.12□□□□□ -1.11
NECAP1-208ENST00000545807 PNPLA6Q8IY17 1366 aa8.12□□□□□ -1.11
NECAP1-208ENST00000545807 COL3A1P02461 1466 aaPredicted RBP8.12□□□□□ -1.11
NECAP1-208ENST00000545807 CSB-PGBD3P0DP91 1061 aa8.12□□□□□ -1.11
NECAP1-208ENST00000545807 RARSP54136 660 aaKnown RBP8.12□□□□□ -1.11
NECAP1-208ENST00000545807 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
NECAP1-208ENST00000545807 TRMT2AQ8IZ69 625 aaKnown RBP8.12□□□□□ -1.11
NECAP1-208ENST00000545807 ANKRD7Q92527 254 aa8.12□□□□□ -1.11
NECAP1-208ENST00000545807 GOLIM4O00461 696 aa8.12□□□□□ -1.11
NECAP1-208ENST00000545807 PDCL2Q8N4E4 241 aa8.12□□□□□ -1.11
NECAP1-208ENST00000545807 SSH1Q8WYL5 1049 aa8.12□□□□□ -1.11
NECAP1-208ENST00000545807 DONSONQ9NYP3 566 aa8.12□□□□□ -1.11
NECAP1-208ENST00000545807 CHD2O14647 1828 aaKnown RBP8.11□□□□□ -1.11
NECAP1-208ENST00000545807 XRN1Q8IZH2 1706 aaKnown RBP8.11□□□□□ -1.11
NECAP1-208ENST00000545807 OVOS2A0A0J9YW53 1432 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms