RNA–Protein interactions for RNA: ENST00000545067.6

CCDC7-210, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 4,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-210ENST00000545067 PRPF40BQ6NWY9 871 aaKnown RBP10.48□□□□□ -0.73
CCDC7-210ENST00000545067 CCDC83Q8IWF9 413 aa10.48□□□□□ -0.73
CCDC7-210ENST00000545067 BOLA2Q9H3K6 86 aa10.48□□□□□ -0.73
CCDC7-210ENST00000545067 PA2G4Q9UQ80 394 aaKnown RBP10.47□□□□□ -0.73
CCDC7-210ENST00000545067 H3BQV1 296 aa10.47□□□□□ -0.73
CCDC7-210ENST00000545067 DDX58O95786 925 aaKnown RBP10.47□□□□□ -0.73
CCDC7-210ENST00000545067 CCDC173Q0VFZ6 552 aa10.47□□□□□ -0.73
CCDC7-210ENST00000545067 IFFO2Q5TF58 517 aa10.47□□□□□ -0.73
CCDC7-210ENST00000545067 RNF17Q9BXT8 1623 aaKnown RBP10.47□□□□□ -0.73
CCDC7-210ENST00000545067 PHF14O94880 888 aa10.47□□□□□ -0.73
CCDC7-210ENST00000545067 TAF7LQ5H9L4 462 aa10.47□□□□□ -0.73
CCDC7-210ENST00000545067 CCDC85AQ96PX6 553 aaPredicted RBP10.47□□□□□ -0.73
CCDC7-210ENST00000545067 CHMP4AQ9BY43 222 aa10.47□□□□□ -0.73
CCDC7-210ENST00000545067 TNRQ92752 1358 aa10.47□□□□□ -0.73
CCDC7-210ENST00000545067 PRR36Q9H6K5 1346 aa10.46□□□□□ -0.73
CCDC7-210ENST00000545067 HSP90AB4PQ58FF6 505 aa10.46□□□□□ -0.73
CCDC7-210ENST00000545067 PHF8Q9UPP1 1060 aa10.46□□□□□ -0.73
CCDC7-210ENST00000545067 ABCC4O15439 1325 aa10.46□□□□□ -0.73
CCDC7-210ENST00000545067 ZFYVE9O95405 1425 aa10.46□□□□□ -0.73
CCDC7-210ENST00000545067 KCNA6P17658 529 aa10.46□□□□□ -0.73
CCDC7-210ENST00000545067 FAM184AQ8NB25 1140 aa10.46□□□□□ -0.73
CCDC7-210ENST00000545067 DNAAF4Q8WXU2 420 aa10.46□□□□□ -0.73
CCDC7-210ENST00000545067 PRIM1P49642 420 aaKnown RBP10.46□□□□□ -0.74
CCDC7-210ENST00000545067 ZSCAN23Q3MJ62 389 aa10.46□□□□□ -0.74
CCDC7-210ENST00000545067 SPC24Q8NBT2 197 aa10.46□□□□□ -0.74
CCDC7-210ENST00000545067 BICD2Q8TD16 824 aa10.46□□□□□ -0.74
CCDC7-210ENST00000545067 ESYT1Q9BSJ8 1104 aa10.46□□□□□ -0.74
CCDC7-210ENST00000545067 HDAC5Q9UQL6 1122 aa10.46□□□□□ -0.74
CCDC7-210ENST00000545067 SLC39A6Q13433 755 aa10.45□□□□□ -0.74
CCDC7-210ENST00000545067 KLHL40Q2TBA0 621 aa10.45□□□□□ -0.74
CCDC7-210ENST00000545067 MCM2P49736 904 aa10.45□□□□□ -0.74
CCDC7-210ENST00000545067 RHPN1Q8TCX5 695 aa10.45□□□□□ -0.74
CCDC7-210ENST00000545067 KIF1BPQ96EK5 621 aa10.45□□□□□ -0.74
CCDC7-210ENST00000545067 LGR6Q9HBX8 967 aa10.45□□□□□ -0.74
CCDC7-210ENST00000545067 ATP6V1DQ9Y5K8 247 aa10.45□□□□□ -0.74
CCDC7-210ENST00000545067 MBD3O95983 291 aa10.45□□□□□ -0.74
CCDC7-210ENST00000545067 PROSER2Q86WR7 435 aaPredicted RBP10.45□□□□□ -0.74
CCDC7-210ENST00000545067 TSPY26PQ9H489 355 aa10.45□□□□□ -0.74
CCDC7-210ENST00000545067 CWF19L2Q2TBE0 894 aaKnown RBP10.44□□□□□ -0.74
CCDC7-210ENST00000545067 MAP3K2Q9Y2U5 619 aa10.44□□□□□ -0.74
CCDC7-210ENST00000545067 EDC4Q6P2E9 1401 aaKnown RBP10.44□□□□□ -0.74
CCDC7-210ENST00000545067 NECAB1Q8N987 351 aa10.44□□□□□ -0.74
CCDC7-210ENST00000545067 ABCC3O15438 1527 aa10.43□□□□□ -0.74
CCDC7-210ENST00000545067 NBPF7P0C2Y1 421 aaPredicted RBP10.43□□□□□ -0.74
CCDC7-210ENST00000545067 ATP8B2P98198 1209 aa10.43□□□□□ -0.74
CCDC7-210ENST00000545067 PALD1Q9ULE6 856 aa10.43□□□□□ -0.74
CCDC7-210ENST00000545067 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.43□□□□□ -0.74
CCDC7-210ENST00000545067 CYP46A1Q9Y6A2 500 aa10.43□□□□□ -0.74
CCDC7-210ENST00000545067 SHROOM2Q13796 1616 aa10.43□□□□□ -0.74
CCDC7-210ENST00000545067 KCNQ3O43525 872 aa10.43□□□□□ -0.74
CCDC7-210ENST00000545067 CAMK4Q16566 473 aa10.43□□□□□ -0.74
CCDC7-210ENST00000545067 DDX11Q96FC9 970 aa10.43□□□□□ -0.74
CCDC7-210ENST00000545067 PDRG1Q9NUG6 133 aa10.43□□□□□ -0.74
CCDC7-210ENST00000545067 WDR33Q9C0J8 1336 aaKnown RBP10.43□□□□□ -0.74
CCDC7-210ENST00000545067 MLH3Q9UHC1 1453 aa10.43□□□□□ -0.74
CCDC7-210ENST00000545067 LARP1BQ659C4 914 aaKnown RBP10.43□□□□□ -0.74
CCDC7-210ENST00000545067 ZNF853P0CG23 659 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 CHAF1AQ13111 956 aaPredicted RBP10.42□□□□□ -0.74
CCDC7-210ENST00000545067 ZSCAN30Q86W11 494 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 CEP152O94986 1710 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 ATP5J2-PTCD1G3V325 749 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 PTCD1O75127 700 aaKnown RBP10.42□□□□□ -0.74
CCDC7-210ENST00000545067 CHMLP26374 656 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 GNL2Q13823 731 aaKnown RBP10.42□□□□□ -0.74
CCDC7-210ENST00000545067 ZNF830Q96NB3 372 aaPredicted RBP10.42□□□□□ -0.74
CCDC7-210ENST00000545067 RTL1A6NKG5 1358 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 TULP4Q9NRJ4 1543 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 RNF20Q5VTR2 975 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 UNC5CLQ8IV45 518 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 SYTL4Q96C24 671 aaPredicted RBP10.42□□□□□ -0.74
CCDC7-210ENST00000545067 TOMM22Q9NS69 142 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 HOXC9P31274 260 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 IL17REQ8NFR9 667 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 KLHDC4Q8TBB5 520 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 TFIP11Q9UBB9 837 aaKnown RBP10.42□□□□□ -0.74
CCDC7-210ENST00000545067 USP25Q9UHP3 1055 aa10.42□□□□□ -0.74
CCDC7-210ENST00000545067 ISY1Q9ULR0 285 aaKnown RBP10.42□□□□□ -0.74
CCDC7-210ENST00000545067 SF3A1Q15459 793 aaKnown RBP10.41□□□□□ -0.74
CCDC7-210ENST00000545067 CSPP1Q1MSJ5 1256 aa10.41□□□□□ -0.74
CCDC7-210ENST00000545067 PPRC1Q5VV67 1664 aaKnown RBP10.41□□□□□ -0.74
CCDC7-210ENST00000545067 GLRX3O76003 335 aaKnown RBP10.41□□□□□ -0.74
CCDC7-210ENST00000545067 CHRNA2Q15822 529 aa10.41□□□□□ -0.74
CCDC7-210ENST00000545067 ANKLE2Q86XL3 938 aa10.41□□□□□ -0.74
CCDC7-210ENST00000545067 MYD88Q99836 296 aa10.41□□□□□ -0.74
CCDC7-210ENST00000545067 FLT4P35916 1363 aa10.41□□□□□ -0.74
CCDC7-210ENST00000545067 FAM177BA6PVY3 158 aa10.41□□□□□ -0.74
CCDC7-210ENST00000545067 RAB11FIP3O75154 756 aa10.41□□□□□ -0.74
CCDC7-210ENST00000545067 ZNF592Q92610 1267 aa10.41□□□□□ -0.74
CCDC7-210ENST00000545067 CNPY2Q9Y2B0 182 aa10.41□□□□□ -0.74
CCDC7-210ENST00000545067 GLI2P10070 1586 aa10.4□□□□□ -0.74
CCDC7-210ENST00000545067 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.4□□□□□ -0.74
CCDC7-210ENST00000545067 RBSNQ9H1K0 784 aa10.4□□□□□ -0.74
CCDC7-210ENST00000545067 PPP6R1Q9UPN7 881 aa10.4□□□□□ -0.74
CCDC7-210ENST00000545067 IQGAP1P46940 1657 aa10.4□□□□□ -0.74
CCDC7-210ENST00000545067 LAMC1P11047 1609 aa10.4□□□□□ -0.74
CCDC7-210ENST00000545067 ROBO2Q9HCK4 1378 aa10.4□□□□□ -0.74
CCDC7-210ENST00000545067 WASHC4Q2M389 1173 aa10.4□□□□□ -0.74
CCDC7-210ENST00000545067 APPP05067 770 aa10.4□□□□□ -0.75
CCDC7-210ENST00000545067 NCBP3Q53F19 620 aaKnown RBP10.4□□□□□ -0.75
CCDC7-210ENST00000545067 BLOC1S2Q6QNY1 142 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms