RNA–Protein interactions for RNA: ENST00000545040.1

CABP4-206, Transcript of calcium binding protein 4, humanhuman

TSL 1 (best)

Gene CABP4, Length 914 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CABP4-206ENST00000545040 DCTN1Q14203 1278 aa18.89■□□□□ 0.61
CABP4-206ENST00000545040 RUNDC1Q96C34 613 aa18.89■□□□□ 0.61
CABP4-206ENST00000545040 ANO8Q9HCE9 1232 aaPredicted RBP18.89■□□□□ 0.61
CABP4-206ENST00000545040 LOC102724428A0A0B4J2F2 783 aa18.88■□□□□ 0.61
CABP4-206ENST00000545040 SIK1P57059 783 aa18.88■□□□□ 0.61
CABP4-206ENST00000545040 RGPD3A6NKT7 1758 aaPredicted RBP18.87■□□□□ 0.61
CABP4-206ENST00000545040 HTATSF1O43719 755 aaKnown RBP18.87■□□□□ 0.61
CABP4-206ENST00000545040 PTCD1O75127 700 aaKnown RBP18.87■□□□□ 0.61
CABP4-206ENST00000545040 ITGB4P16144 1822 aa18.87■□□□□ 0.61
CABP4-206ENST00000545040 ATP6V1AP38606 617 aa18.87■□□□□ 0.61
CABP4-206ENST00000545040 RIPK4P57078 832 aa18.87■□□□□ 0.61
CABP4-206ENST00000545040 SLC39A6Q13433 755 aa18.87■□□□□ 0.61
CABP4-206ENST00000545040 NEUROD2Q15784 382 aa18.87■□□□□ 0.61
CABP4-206ENST00000545040 RGPD4Q7Z3J3 1758 aa18.87■□□□□ 0.61
CABP4-206ENST00000545040 RREB1Q92766 1687 aa18.87■□□□□ 0.61
CABP4-206ENST00000545040 RRP7AQ9Y3A4 280 aaKnown RBP18.87■□□□□ 0.61
CABP4-206ENST00000545040 SLC15A2Q16348 729 aa18.86■□□□□ 0.61
CABP4-206ENST00000545040 NUP188Q5SRE5 1749 aa18.86■□□□□ 0.61
CABP4-206ENST00000545040 TMPOP42166 694 aaKnown RBP18.85■□□□□ 0.61
CABP4-206ENST00000545040 DIEXFQ68CQ4 756 aaKnown RBP18.85■□□□□ 0.61
CABP4-206ENST00000545040 PNISRQ8TF01 805 aaKnown RBP18.85■□□□□ 0.61
CABP4-206ENST00000545040 ZNF827Q17R98 1081 aa18.84■□□□□ 0.61
CABP4-206ENST00000545040 TTC5Q8N0Z6 440 aa18.84■□□□□ 0.61
CABP4-206ENST00000545040 CEMIPQ8WUJ3 1361 aa18.83■□□□□ 0.61
CABP4-206ENST00000545040 BTBD11A6QL63 1104 aa18.83■□□□□ 0.6
CABP4-206ENST00000545040 HMGB2P26583 209 aaKnown RBP18.83■□□□□ 0.6
CABP4-206ENST00000545040 TFCP2L1Q9NZI6 479 aa18.83■□□□□ 0.6
CABP4-206ENST00000545040 SCN11AQ9UI33 1791 aa18.83■□□□□ 0.6
CABP4-206ENST00000545040 ITPK1Q13572 414 aa18.82■□□□□ 0.6
CABP4-206ENST00000545040 FAM9BQ8IZU0 186 aa18.82■□□□□ 0.6
CABP4-206ENST00000545040 AKT1S1Q96B36 256 aa18.82■□□□□ 0.6
CABP4-206ENST00000545040 THUMPD2Q9BTF0 503 aaKnown RBP18.82■□□□□ 0.6
CABP4-206ENST00000545040 MRC1P22897 1456 aa18.82■□□□□ 0.6
CABP4-206ENST00000545040 APAF1O14727 1248 aa18.81■□□□□ 0.6
CABP4-206ENST00000545040 LMOD3Q0VAK6 560 aa18.81■□□□□ 0.6
CABP4-206ENST00000545040 LINC00116Q8NCU8 138 aa18.81■□□□□ 0.6
CABP4-206ENST00000545040 SLC4A9Q96Q91 983 aa18.81■□□□□ 0.6
CABP4-206ENST00000545040 TAF7Q15545 349 aaPredicted RBP18.8■□□□□ 0.6
CABP4-206ENST00000545040 AK7Q96M32 723 aa18.8■□□□□ 0.6
CABP4-206ENST00000545040 LY75O60449 1722 aa18.8■□□□□ 0.6
CABP4-206ENST00000545040 ADAMTS7Q9UKP4 1686 aa18.79■□□□□ 0.6
CABP4-206ENST00000545040 SENP3-EIF4A1A0A087X0R7 540 aa18.79■□□□□ 0.6
CABP4-206ENST00000545040 ZNF790Q6PG37 636 aa18.79■□□□□ 0.6
CABP4-206ENST00000545040 MIS18AQ9NYP9 233 aa18.79■□□□□ 0.6
CABP4-206ENST00000545040 KCNQ3O43525 872 aa18.78■□□□□ 0.6
CABP4-206ENST00000545040 MSH5O43196 834 aa18.77■□□□□ 0.6
CABP4-206ENST00000545040 PDGFDQ9GZP0 370 aaPredicted RBP18.77■□□□□ 0.6
CABP4-206ENST00000545040 PAPPAQ13219 1627 aa18.76■□□□□ 0.59
CABP4-206ENST00000545040 DNAJC10Q8IXB1 793 aa18.76■□□□□ 0.59
CABP4-206ENST00000545040 ZNF496Q96IT1 587 aaPredicted RBP18.76■□□□□ 0.59
CABP4-206ENST00000545040 FMNL2Q96PY5 1086 aa18.76■□□□□ 0.59
CABP4-206ENST00000545040 GNPATO15228 680 aa18.75■□□□□ 0.59
CABP4-206ENST00000545040 PHF14O94880 888 aa18.75■□□□□ 0.59
CABP4-206ENST00000545040 TRIM35Q9UPQ4 493 aa18.75■□□□□ 0.59
CABP4-206ENST00000545040 LAS1LQ9Y4W2 734 aaKnown RBP18.75■□□□□ 0.59
CABP4-206ENST00000545040 ZBTB7AO95365 584 aa18.74■□□□□ 0.59
CABP4-206ENST00000545040 SMIM5Q71RC9 77 aa18.74■□□□□ 0.59
CABP4-206ENST00000545040 PNPLA7Q6ZV29 1317 aa18.74■□□□□ 0.59
CABP4-206ENST00000545040 CCER2I3L3R5 266 aa18.73■□□□□ 0.59
CABP4-206ENST00000545040 VSIG10Q8N0Z9 540 aa18.73■□□□□ 0.59
CABP4-206ENST00000545040 MIER1Q8N108 512 aa18.73■□□□□ 0.59
CABP4-206ENST00000545040 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
CABP4-206ENST00000545040 HEG1Q9ULI3 1381 aa18.72■□□□□ 0.59
CABP4-206ENST00000545040 RC3H1Q5TC82 1133 aaKnown RBP18.72■□□□□ 0.59
CABP4-206ENST00000545040 COL23A1Q86Y22 540 aaPredicted RBP18.72■□□□□ 0.59
CABP4-206ENST00000545040 SALL2Q9Y467 1007 aaPredicted RBP18.72■□□□□ 0.59
CABP4-206ENST00000545040 KCPQ6ZWJ8 1503 aa18.72■□□□□ 0.59
CABP4-206ENST00000545040 C5P01031 1676 aa18.72■□□□□ 0.59
CABP4-206ENST00000545040 VIRMAQ69YN4 1812 aaKnown RBP18.72■□□□□ 0.59
CABP4-206ENST00000545040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.71■□□□□ 0.59
CABP4-206ENST00000545040 CRKLP46109 303 aaKnown RBP18.71■□□□□ 0.59
CABP4-206ENST00000545040 FLAD1Q8NFF5 587 aa18.71■□□□□ 0.59
CABP4-206ENST00000545040 ATF5Q9Y2D1 282 aaPredicted RBP18.71■□□□□ 0.59
CABP4-206ENST00000545040 RTCBQ9Y3I0 505 aaKnown RBP18.71■□□□□ 0.59
CABP4-206ENST00000545040 CNTNAP4Q9C0A0 1308 aa18.71■□□□□ 0.59
CABP4-206ENST00000545040 DLG5Q8TDM6 1919 aa18.7■□□□□ 0.58
CABP4-206ENST00000545040 STARD3NLO95772 234 aa18.7■□□□□ 0.58
CABP4-206ENST00000545040 C4BP0C0L5 1744 aa18.7■□□□□ 0.58
CABP4-206ENST00000545040 CYP19A1P11511 503 aaPredicted RBP18.7■□□□□ 0.58
CABP4-206ENST00000545040 AMIGO3Q86WK7 504 aa18.7■□□□□ 0.58
CABP4-206ENST00000545040 TEX13AQ9BXU3 409 aaPredicted RBP18.7■□□□□ 0.58
CABP4-206ENST00000545040 SSFA2P28290 1259 aa18.69■□□□□ 0.58
CABP4-206ENST00000545040 TRAPPC3LQ5T215 181 aa18.69■□□□□ 0.58
CABP4-206ENST00000545040 SPON1Q9HCB6 807 aa18.69■□□□□ 0.58
CABP4-206ENST00000545040 CCDC87Q9NVE4 849 aa18.69■□□□□ 0.58
CABP4-206ENST00000545040 RPS6KA4O75676 772 aa18.68■□□□□ 0.58
CABP4-206ENST00000545040 SNRPA1P09661 255 aaKnown RBP18.68■□□□□ 0.58
CABP4-206ENST00000545040 INTS5Q6P9B9 1019 aaKnown RBP18.68■□□□□ 0.58
CABP4-206ENST00000545040 MTFR1LQ9H019 292 aa18.68■□□□□ 0.58
CABP4-206ENST00000545040 SIPA1L3O60292 1781 aaPredicted RBP18.68■□□□□ 0.58
CABP4-206ENST00000545040 PRAMEF22A3QJZ6 481 aa18.67■□□□□ 0.58
CABP4-206ENST00000545040 CANXP27824 592 aaKnown RBP18.67■□□□□ 0.58
CABP4-206ENST00000545040 EIF4A1P60842 406 aaKnown RBP18.67■□□□□ 0.58
CABP4-206ENST00000545040 CALD1Q05682 793 aaKnown RBP18.67■□□□□ 0.58
CABP4-206ENST00000545040 SLC16A10Q8TF71 515 aa18.67■□□□□ 0.58
CABP4-206ENST00000545040 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
CABP4-206ENST00000545040 ZBTB1Q9Y2K1 713 aa18.66■□□□□ 0.58
CABP4-206ENST00000545040 USP16Q9Y5T5 823 aa18.66■□□□□ 0.58
CABP4-206ENST00000545040 TAF1LQ8IZX4 1826 aa18.65■□□□□ 0.58
CABP4-206ENST00000545040 A1BGP04217 495 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms