RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 PLEKHG3A1L390 1219 aa10.4□□□□□ -0.74
CIT-215ENST00000544800 PHF14O94880 888 aa10.4□□□□□ -0.74
CIT-215ENST00000544800 ITGBL1O95965 494 aaPredicted RBP10.4□□□□□ -0.74
CIT-215ENST00000544800 ECE1P42892 770 aa10.4□□□□□ -0.74
CIT-215ENST00000544800 MNX1P50219 401 aaPredicted RBP10.4□□□□□ -0.74
CIT-215ENST00000544800 RGL3Q3MIN7 710 aa10.4□□□□□ -0.74
CIT-215ENST00000544800 ARHGEF25Q86VW2 580 aa10.4□□□□□ -0.74
CIT-215ENST00000544800 DDX54Q8TDD1 881 aaKnown RBP10.4□□□□□ -0.74
CIT-215ENST00000544800 GPR101Q96P66 508 aaPredicted RBP10.4□□□□□ -0.74
CIT-215ENST00000544800 CCDC87Q9NVE4 849 aa10.4□□□□□ -0.74
CIT-215ENST00000544800 LY75O60449 1722 aa10.4□□□□□ -0.74
CIT-215ENST00000544800 KIAA1551Q9HCM1 1747 aa10.39□□□□□ -0.75
CIT-215ENST00000544800 SSFA2P28290 1259 aa10.39□□□□□ -0.75
CIT-215ENST00000544800 CFAP70Q5T0N1 1121 aa10.39□□□□□ -0.75
CIT-215ENST00000544800 AMIGO3Q86WK7 504 aa10.39□□□□□ -0.75
CIT-215ENST00000544800 LDHDQ86WU2 507 aa10.39□□□□□ -0.75
CIT-215ENST00000544800 NSD3Q9BZ95 1437 aa10.39□□□□□ -0.75
CIT-215ENST00000544800 NSD2O96028 1365 aa10.39□□□□□ -0.75
CIT-215ENST00000544800 USP54Q70EL1 1684 aa10.38□□□□□ -0.75
CIT-215ENST00000544800 KIF13BQ9NQT8 1826 aa10.38□□□□□ -0.75
CIT-215ENST00000544800 FXR2P51116 673 aaKnown RBP eCLIP10.38□□□□□ -0.75
CIT-215ENST00000544800 CAPNS2Q96L46 248 aa10.38□□□□□ -0.75
CIT-215ENST00000544800 ABT1Q9ULW3 272 aaKnown RBP10.38□□□□□ -0.75
CIT-215ENST00000544800 CCDC61Q9Y6R9 512 aa10.38□□□□□ -0.75
CIT-215ENST00000544800 CPSF1Q10570 1443 aaKnown RBP10.38□□□□□ -0.75
CIT-215ENST00000544800 SBF1O95248 1867 aa10.38□□□□□ -0.75
CIT-215ENST00000544800 QRICH2Q9H0J4 1663 aa10.38□□□□□ -0.75
CIT-215ENST00000544800 ARFGEF1Q9Y6D6 1849 aa10.37□□□□□ -0.75
CIT-215ENST00000544800 MAP2K2P36507 400 aa10.37□□□□□ -0.75
CIT-215ENST00000544800 RASSF7Q02833 373 aa10.37□□□□□ -0.75
CIT-215ENST00000544800 SP7Q8TDD2 431 aaPredicted RBP10.37□□□□□ -0.75
CIT-215ENST00000544800 NLRP2Q9NX02 1062 aa10.37□□□□□ -0.75
CIT-215ENST00000544800 ITSN1Q15811 1721 aa10.36□□□□□ -0.75
CIT-215ENST00000544800 CASP8AP2Q9UKL3 1982 aa10.36□□□□□ -0.75
CIT-215ENST00000544800 NLGN1Q8N2Q7 840 aa10.36□□□□□ -0.75
CIT-215ENST00000544800 MPNDQ8N594 471 aa10.36□□□□□ -0.75
CIT-215ENST00000544800 TRAK1Q9UPV9 953 aa10.36□□□□□ -0.75
CIT-215ENST00000544800 HAX1O00165 279 aa10.35□□□□□ -0.75
CIT-215ENST00000544800 KCNH5Q8NCM2 988 aa10.35□□□□□ -0.75
CIT-215ENST00000544800 CLEC11AQ9Y240 323 aa10.35□□□□□ -0.75
CIT-215ENST00000544800 SLIT3O75094 1523 aa10.34□□□□□ -0.75
CIT-215ENST00000544800 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
CIT-215ENST00000544800 ZNF692Q9BU19 519 aaPredicted RBP10.34□□□□□ -0.75
CIT-215ENST00000544800 SZT2Q5T011 3432 aa10.34□□□□□ -0.75
CIT-215ENST00000544800 IQCA1LA6NCM1 817 aa10.33□□□□□ -0.76
CIT-215ENST00000544800 TMF1P82094 1093 aa10.33□□□□□ -0.76
CIT-215ENST00000544800 ADAMTS7Q9UKP4 1686 aa10.33□□□□□ -0.76
CIT-215ENST00000544800 BRCA1P38398 1863 aaKnown RBP10.33□□□□□ -0.76
CIT-215ENST00000544800 GRM1Q13255 1194 aa10.32□□□□□ -0.76
CIT-215ENST00000544800 CYP4F22Q6NT55 531 aa10.32□□□□□ -0.76
CIT-215ENST00000544800 CDK19Q9BWU1 502 aa10.32□□□□□ -0.76
CIT-215ENST00000544800 PARP3Q9Y6F1 533 aa10.32□□□□□ -0.76
CIT-215ENST00000544800 C5P01031 1676 aa10.31□□□□□ -0.76
CIT-215ENST00000544800 THSD7BQ9C0I4 1608 aa10.3□□□□□ -0.76
CIT-215ENST00000544800 BRPF1P55201 1214 aaPredicted RBP10.3□□□□□ -0.76
CIT-215ENST00000544800 TAF1DQ9H5J8 278 aaPredicted RBP10.3□□□□□ -0.76
CIT-215ENST00000544800 LTBP1Q14766 1721 aa10.3□□□□□ -0.76
CIT-215ENST00000544800 PALLDQ8WX93 1383 aa10.29□□□□□ -0.76
CIT-215ENST00000544800 AOC2O75106 756 aa10.29□□□□□ -0.76
CIT-215ENST00000544800 DDNO94850 711 aaPredicted RBP10.29□□□□□ -0.76
CIT-215ENST00000544800 CNTROBQ8N137 903 aa10.29□□□□□ -0.76
CIT-215ENST00000544800 SSUH2Q9Y2M2 353 aa10.29□□□□□ -0.76
CIT-215ENST00000544800 C4BP0C0L5 1744 aa10.28□□□□□ -0.76
CIT-215ENST00000544800 CHRNA5P30532 468 aa10.28□□□□□ -0.76
CIT-215ENST00000544800 COLQQ9Y215 455 aaPredicted RBP10.28□□□□□ -0.76
CIT-215ENST00000544800 MEGF6O75095 1541 aa10.28□□□□□ -0.76
CIT-215ENST00000544800 RGPD5Q99666 1765 aa10.27□□□□□ -0.77
CIT-215ENST00000544800 SOX12O15370 315 aa10.27□□□□□ -0.77
CIT-215ENST00000544800 NBPF1Q3BBV0 1214 aa10.27□□□□□ -0.77
CIT-215ENST00000544800 ERFEQ4G0M1 354 aa10.27□□□□□ -0.77
CIT-215ENST00000544800 EAPPQ56P03 285 aaPredicted RBP10.27□□□□□ -0.77
CIT-215ENST00000544800 SPDYE1Q8NFV5 336 aaPredicted RBP10.27□□□□□ -0.77
CIT-215ENST00000544800 SMARCC1Q92922 1105 aaPredicted RBP10.27□□□□□ -0.77
CIT-215ENST00000544800 DDX21Q9NR30 783 aaKnown RBP eCLIP10.27□□□□□ -0.77
CIT-215ENST00000544800 TRIOBPQ9H2D6 2365 aa10.27□□□□□ -0.77
CIT-215ENST00000544800 COL6A3P12111 3177 aa10.27□□□□□ -0.77
CIT-215ENST00000544800 UBR3Q6ZT12 1888 aa10.26□□□□□ -0.77
CIT-215ENST00000544800 GNPATO15228 680 aa10.26□□□□□ -0.77
CIT-215ENST00000544800 L3MBTL3Q96JM7 780 aaPredicted RBP10.26□□□□□ -0.77
CIT-215ENST00000544800 TOGARAM1Q9Y4F4 1720 aa10.26□□□□□ -0.77
CIT-215ENST00000544800 NFKBIEO00221 500 aa10.25□□□□□ -0.77
CIT-215ENST00000544800 PRKAR2AP13861 404 aaKnown RBP10.25□□□□□ -0.77
CIT-215ENST00000544800 EVX2Q03828 476 aa10.25□□□□□ -0.77
CIT-215ENST00000544800 TRAPPC3LQ5T215 181 aa10.25□□□□□ -0.77
CIT-215ENST00000544800 MAP1SQ66K74 1059 aaPredicted RBP10.25□□□□□ -0.77
CIT-215ENST00000544800 HPS5Q9UPZ3 1129 aa10.25□□□□□ -0.77
CIT-215ENST00000544800 TAF1LQ8IZX4 1826 aa10.25□□□□□ -0.77
CIT-215ENST00000544800 CTU1Q7Z7A3 348 aaKnown RBP10.24□□□□□ -0.77
CIT-215ENST00000544800 PNMA8AQ86V59 439 aaPredicted RBP10.24□□□□□ -0.77
CIT-215ENST00000544800 ZCRB1Q8TBF4 217 aaKnown RBP10.24□□□□□ -0.77
CIT-215ENST00000544800 ANKRD24Q8TF21 1146 aa10.24□□□□□ -0.77
CIT-215ENST00000544800 TLL2Q9Y6L7 1015 aa10.24□□□□□ -0.77
CIT-215ENST00000544800 GYS1P13807 737 aa10.23□□□□□ -0.77
CIT-215ENST00000544800 CIAPIN1Q6FI81 312 aa10.23□□□□□ -0.77
CIT-215ENST00000544800 LINC00116Q8NCU8 138 aa10.23□□□□□ -0.77
CIT-215ENST00000544800 COL25A1Q9BXS0 654 aaPredicted RBP10.23□□□□□ -0.77
CIT-215ENST00000544800 DOT1LQ8TEK3 1739 aa10.23□□□□□ -0.77
CIT-215ENST00000544800 C4AP0C0L4 1744 aa10.22□□□□□ -0.77
CIT-215ENST00000544800 TIAM2Q8IVF5 1701 aa10.22□□□□□ -0.77
CIT-215ENST00000544800 PRDM6Q9NQX0 595 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms