RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 TMX1Q9H3N1 280 aa23.34■■□□□ 1.33
BPTF-208ENST00000544778 MRPS9P82933 396 aaKnown RBP23.34■■□□□ 1.33
BPTF-208ENST00000544778 IL1RAPL2Q9NP60 686 aa23.34■■□□□ 1.33
BPTF-208ENST00000544778 LUZP1Q86V48 1076 aa23.34■■□□□ 1.33
BPTF-208ENST00000544778 SMC1AQ14683 1233 aaKnown RBP23.34■■□□□ 1.33
BPTF-208ENST00000544778 MAPK8IP2Q13387 824 aaPredicted RBP23.33■■□□□ 1.33
BPTF-208ENST00000544778 CDCA7LQ96GN5 454 aa23.33■■□□□ 1.33
BPTF-208ENST00000544778 VPS36Q86VN1 386 aa23.33■■□□□ 1.33
BPTF-208ENST00000544778 SERPINA10Q9UK55 444 aa23.33■■□□□ 1.32
BPTF-208ENST00000544778 ZNF444Q8N0Y2 327 aaPredicted RBP23.32■■□□□ 1.32
BPTF-208ENST00000544778 KAT6BQ8WYB5 2073 aa23.32■■□□□ 1.32
BPTF-208ENST00000544778 GCOM1H8Y6P7 765 aaPredicted RBP23.32■■□□□ 1.32
BPTF-208ENST00000544778 MYZAPP0CAP1 466 aa23.32■■□□□ 1.32
BPTF-208ENST00000544778 PUF60Q9UHX1 559 aaKnown RBP23.32■■□□□ 1.32
BPTF-208ENST00000544778 WIZO95785 1651 aa23.31■■□□□ 1.32
BPTF-208ENST00000544778 SHTN1A0MZ66 631 aa23.31■■□□□ 1.32
BPTF-208ENST00000544778 CCDC82Q8N4S0 544 aa23.31■■□□□ 1.32
BPTF-208ENST00000544778 KRT32Q14532 448 aa23.31■■□□□ 1.32
BPTF-208ENST00000544778 NUTM1Q86Y26 1132 aa23.31■■□□□ 1.32
BPTF-208ENST00000544778 SSX2IPQ9Y2D8 614 aa23.3■■□□□ 1.32
BPTF-208ENST00000544778 RANBP6O60518 1105 aaKnown RBP23.3■■□□□ 1.32
BPTF-208ENST00000544778 ZNF354CQ86Y25 554 aa23.3■■□□□ 1.32
BPTF-208ENST00000544778 LMAN1P49257 510 aa23.3■■□□□ 1.32
BPTF-208ENST00000544778 SPTY2D1Q68D10 685 aaPredicted RBP23.3■■□□□ 1.32
BPTF-208ENST00000544778 RPGRQ92834 1020 aaKnown RBP23.3■■□□□ 1.32
BPTF-208ENST00000544778 EHMT1Q9H9B1 1298 aa23.3■■□□□ 1.32
BPTF-208ENST00000544778 FYCO1Q9BQS8 1478 aa23.29■■□□□ 1.32
BPTF-208ENST00000544778 TMEM266Q2M3C6 531 aa23.29■■□□□ 1.32
BPTF-208ENST00000544778 ZSCAN31Q96LW9 406 aaPredicted RBP23.28■■□□□ 1.32
BPTF-208ENST00000544778 FERP16591 822 aa23.28■■□□□ 1.32
BPTF-208ENST00000544778 RRS1Q15050 365 aaKnown RBP23.28■■□□□ 1.32
BPTF-208ENST00000544778 GIGYF2Q6Y7W6 1299 aaKnown RBP23.28■■□□□ 1.32
BPTF-208ENST00000544778 KIF5CO60282 957 aa23.27■■□□□ 1.32
BPTF-208ENST00000544778 CHD1LQ86WJ1 897 aa23.27■■□□□ 1.32
BPTF-208ENST00000544778 NUP88Q99567 741 aaPredicted RBP23.27■■□□□ 1.32
BPTF-208ENST00000544778 PTCD1O75127 700 aaKnown RBP23.27■■□□□ 1.32
BPTF-208ENST00000544778 FGFR1OPO95684 399 aaKnown RBP23.27■■□□□ 1.32
BPTF-208ENST00000544778 TDRD12Q587J7 1177 aaKnown RBP23.27■■□□□ 1.32
BPTF-208ENST00000544778 UBXN4Q92575 508 aa23.27■■□□□ 1.32
BPTF-208ENST00000544778 NAPBQ9H115 298 aa23.27■■□□□ 1.32
BPTF-208ENST00000544778 PPP6R1Q9UPN7 881 aa23.27■■□□□ 1.32
BPTF-208ENST00000544778 ZC3H6P61129 1189 aaKnown RBP23.27■■□□□ 1.32
BPTF-208ENST00000544778 SLC4A8Q2Y0W8 1093 aa23.27■■□□□ 1.32
BPTF-208ENST00000544778 CABP1Q9NZU7 370 aa23.27■■□□□ 1.32
BPTF-208ENST00000544778 GUCY1B3Q02153 619 aa23.27■■□□□ 1.32
BPTF-208ENST00000544778 GRM1Q13255 1194 aa23.27■■□□□ 1.32
BPTF-208ENST00000544778 BRPF3Q9ULD4 1205 aa23.27■■□□□ 1.32
BPTF-208ENST00000544778 CCDC7Q96M83 1385 aa23.27■■□□□ 1.32
BPTF-208ENST00000544778 CFAP70Q5T0N1 1121 aa23.26■■□□□ 1.31
BPTF-208ENST00000544778 ANKRD18BA2A2Z9 1011 aa23.26■■□□□ 1.31
BPTF-208ENST00000544778 PPP2R1AP30153 589 aa23.26■■□□□ 1.31
BPTF-208ENST00000544778 SAMM50Q9Y512 469 aa23.26■■□□□ 1.31
BPTF-208ENST00000544778 MAP3K11Q16584 847 aa23.26■■□□□ 1.31
BPTF-208ENST00000544778 RNF187Q5TA31 235 aaPredicted RBP23.26■■□□□ 1.31
BPTF-208ENST00000544778 AKAP2Q9Y2D5 859 aa23.26■■□□□ 1.31
BPTF-208ENST00000544778 GRPEL1Q9HAV7 217 aa23.25■■□□□ 1.31
BPTF-208ENST00000544778 PRPF4BQ13523 1007 aaKnown RBP23.25■■□□□ 1.31
BPTF-208ENST00000544778 MAP9Q49MG5 647 aa23.25■■□□□ 1.31
BPTF-208ENST00000544778 TSNARE1Q96NA8 513 aa23.25■■□□□ 1.31
BPTF-208ENST00000544778 RAB34Q9BZG1 259 aa23.25■■□□□ 1.31
BPTF-208ENST00000544778 U3KPZ7 1027 aaPredicted RBP23.25■■□□□ 1.31
BPTF-208ENST00000544778 TMCO5BA8MYB1 307 aa23.25■■□□□ 1.31
BPTF-208ENST00000544778 FEZ1Q99689 392 aa23.25■■□□□ 1.31
BPTF-208ENST00000544778 ARL1P40616 181 aaPredicted RBP23.25■■□□□ 1.31
BPTF-208ENST00000544778 TMOD3Q9NYL9 352 aa23.25■■□□□ 1.31
BPTF-208ENST00000544778 THEMISQ8N1K5 641 aaPredicted RBP23.24■■□□□ 1.31
BPTF-208ENST00000544778 SYCP3Q8IZU3 236 aa23.24■■□□□ 1.31
BPTF-208ENST00000544778 VTI1AQ96AJ9 217 aa23.24■■□□□ 1.31
BPTF-208ENST00000544778 PRKCSHP14314 528 aaPredicted RBP23.24■■□□□ 1.31
BPTF-208ENST00000544778 NLRP5P59047 1200 aa23.23■■□□□ 1.31
BPTF-208ENST00000544778 MAP3K9P80192 1104 aa23.23■■□□□ 1.31
BPTF-208ENST00000544778 CCDC83Q8IWF9 413 aa23.23■■□□□ 1.31
BPTF-208ENST00000544778 MIS18AQ9NYP9 233 aa23.23■■□□□ 1.31
BPTF-208ENST00000544778 IFIT1P09914 478 aaKnown RBP23.23■■□□□ 1.31
BPTF-208ENST00000544778 MMRN2Q9H8L6 949 aa23.23■■□□□ 1.31
BPTF-208ENST00000544778 CTCFLQ8NI51 663 aaPredicted RBP23.23■■□□□ 1.31
BPTF-208ENST00000544778 BAG4O95429 457 aaKnown RBP23.23■■□□□ 1.31
BPTF-208ENST00000544778 KIF4BQ2VIQ3 1234 aa23.23■■□□□ 1.31
BPTF-208ENST00000544778 MYOM3Q5VTT5 1437 aa23.23■■□□□ 1.31
BPTF-208ENST00000544778 CPLX3Q8WVH0 158 aa23.22■■□□□ 1.31
BPTF-208ENST00000544778 SPECC1Q5M775 1068 aa23.22■■□□□ 1.31
BPTF-208ENST00000544778 ZNF692Q9BU19 519 aaPredicted RBP23.22■■□□□ 1.31
BPTF-208ENST00000544778 VAT1LQ9HCJ6 419 aa23.22■■□□□ 1.31
BPTF-208ENST00000544778 ZNF644Q9H582 1327 aaPredicted RBP23.22■■□□□ 1.31
BPTF-208ENST00000544778 PRC1O43663 620 aa23.22■■□□□ 1.31
BPTF-208ENST00000544778 SSRP1Q08945 709 aaKnown RBP23.22■■□□□ 1.31
BPTF-208ENST00000544778 GBP3Q9H0R5 595 aa23.22■■□□□ 1.31
BPTF-208ENST00000544778 TAOK3Q9H2K8 898 aa23.22■■□□□ 1.31
BPTF-208ENST00000544778 SLC12A7Q9Y666 1083 aa23.21■■□□□ 1.31
BPTF-208ENST00000544778 TCERG1LQ5VWI1 586 aa23.21■■□□□ 1.31
BPTF-208ENST00000544778 MYD88Q99836 296 aa23.21■■□□□ 1.31
BPTF-208ENST00000544778 RAD54L2Q9Y4B4 1467 aa23.21■■□□□ 1.31
BPTF-208ENST00000544778 BICD1Q96G01 975 aa23.21■■□□□ 1.31
BPTF-208ENST00000544778 HLTFQ14527 1009 aaKnown RBP eCLIP23.2■■□□□ 1.311e-6■■□□□ 13.8
BPTF-208ENST00000544778 BOLA2Q9H3K6 86 aa23.2■■□□□ 1.31
BPTF-208ENST00000544778 BRD4O60885 1362 aaPredicted RBP23.2■■□□□ 1.31
BPTF-208ENST00000544778 FERMT1Q9BQL6 677 aa23.2■■□□□ 1.3
BPTF-208ENST00000544778 USO1O60763 962 aaKnown RBP23.2■■□□□ 1.3
BPTF-208ENST00000544778 TOP1P11387 765 aaKnown RBP23.2■■□□□ 1.3
BPTF-208ENST00000544778 IQCA1Q86XH1 822 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms