RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
DDX11-227ENST00000544652 LMOD3Q0VAK6 560 aa17.22■□□□□ 0.35
DDX11-227ENST00000544652 IL17REQ8NFR9 667 aa17.22■□□□□ 0.35
DDX11-227ENST00000544652 NEUROD2Q15784 382 aa17.21■□□□□ 0.35
DDX11-227ENST00000544652 MPRIPQ6WCQ1 1025 aa17.21■□□□□ 0.35
DDX11-227ENST00000544652 LGR6Q9HBX8 967 aa17.21■□□□□ 0.35
DDX11-227ENST00000544652 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
DDX11-227ENST00000544652 ERVV-2B6SEH9 535 aa17.2■□□□□ 0.34
DDX11-227ENST00000544652 FAM182BQ5T319 152 aa17.2■□□□□ 0.34
DDX11-227ENST00000544652 FAM196AQ6ZSG2 479 aa17.2■□□□□ 0.34
DDX11-227ENST00000544652 RTF1Q92541 710 aaKnown RBP17.2■□□□□ 0.34
DDX11-227ENST00000544652 ZNF521Q96K83 1311 aa17.19■□□□□ 0.34
DDX11-227ENST00000544652 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
DDX11-227ENST00000544652 DCTN1Q14203 1278 aa17.18■□□□□ 0.34
DDX11-227ENST00000544652 MCM10Q7L590 875 aa17.18■□□□□ 0.34
DDX11-227ENST00000544652 WWC1Q8IX03 1113 aa17.18■□□□□ 0.34
DDX11-227ENST00000544652 TAF1LQ8IZX4 1826 aa17.18■□□□□ 0.34
DDX11-227ENST00000544652 SENP3-EIF4A1A0A087X0R7 540 aa17.16■□□□□ 0.34
DDX11-227ENST00000544652 SLC52A2Q9HAB3 445 aa17.16■□□□□ 0.34
DDX11-227ENST00000544652 HNRNPUQ00839 825 aaKnown RBP eCLIP17.15■□□□□ 0.34
DDX11-227ENST00000544652 THUMPD2Q9BTF0 503 aaKnown RBP17.15■□□□□ 0.34
DDX11-227ENST00000544652 LAMB4A4D0S4 1761 aa17.15■□□□□ 0.34
DDX11-227ENST00000544652 PRIM1P49642 420 aaKnown RBP17.14■□□□□ 0.33
DDX11-227ENST00000544652 CABP4P57796 275 aa17.14■□□□□ 0.33
DDX11-227ENST00000544652 WDR63Q8IWG1 891 aa17.14■□□□□ 0.33
DDX11-227ENST00000544652 NFATC2IPQ8NCF5 419 aa17.14■□□□□ 0.33
DDX11-227ENST00000544652 ACSBG1Q96GR2 724 aa17.14■□□□□ 0.33
DDX11-227ENST00000544652 C5P01031 1676 aa17.13■□□□□ 0.33
DDX11-227ENST00000544652 COL5A3P25940 1745 aaPredicted RBP17.13■□□□□ 0.33
DDX11-227ENST00000544652 TJP1Q07157 1748 aa17.13■□□□□ 0.33
DDX11-227ENST00000544652 KCNQ2O43526 872 aa17.13■□□□□ 0.33
DDX11-227ENST00000544652 CALD1Q05682 793 aaKnown RBP17.13■□□□□ 0.33
DDX11-227ENST00000544652 TEFQ10587 303 aa17.13■□□□□ 0.33
DDX11-227ENST00000544652 BCL11BQ9C0K0 894 aaPredicted RBP17.13■□□□□ 0.33
DDX11-227ENST00000544652 TMOD3Q9NYL9 352 aa17.13■□□□□ 0.33
DDX11-227ENST00000544652 SALL2Q9Y467 1007 aaPredicted RBP17.13■□□□□ 0.33
DDX11-227ENST00000544652 IL16Q14005 1332 aa17.13■□□□□ 0.33
DDX11-227ENST00000544652 KCPQ6ZWJ8 1503 aa17.12■□□□□ 0.33
DDX11-227ENST00000544652 TAF7Q15545 349 aaPredicted RBP17.12■□□□□ 0.33
DDX11-227ENST00000544652 PIGBQ92521 554 aa17.12■□□□□ 0.33
DDX11-227ENST00000544652 BABAM1Q9NWV8 329 aa17.12■□□□□ 0.33
DDX11-227ENST00000544652 RREB1Q92766 1687 aa17.12■□□□□ 0.33
DDX11-227ENST00000544652 ZBED9Q6R2W3 1325 aa17.12■□□□□ 0.33
DDX11-227ENST00000544652 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
DDX11-227ENST00000544652 EP400Q96L91 3159 aa17.11■□□□□ 0.33
DDX11-227ENST00000544652 ZNF853P0CG23 659 aa17.11■□□□□ 0.33
DDX11-227ENST00000544652 PTF1AQ7RTS3 328 aa17.11■□□□□ 0.33
DDX11-227ENST00000544652 TRIM37O94972 964 aa17.1■□□□□ 0.33
DDX11-227ENST00000544652 SYTL4Q96C24 671 aaPredicted RBP17.1■□□□□ 0.33
DDX11-227ENST00000544652 CFAP44Q96MT7 982 aa17.1■□□□□ 0.33
DDX11-227ENST00000544652 CHL1O00533 1208 aa17.09■□□□□ 0.33
DDX11-227ENST00000544652 ILDR2Q71H61 639 aa17.09■□□□□ 0.33
DDX11-227ENST00000544652 IFT57Q9NWB7 429 aa17.09■□□□□ 0.33
DDX11-227ENST00000544652 ZNF219Q9P2Y4 722 aaPredicted RBP17.09■□□□□ 0.33
DDX11-227ENST00000544652 BTBD11A6QL63 1104 aa17.08■□□□□ 0.32
DDX11-227ENST00000544652 GNAI1P63096 354 aa17.08■□□□□ 0.32
DDX11-227ENST00000544652 ATG3Q9NT62 314 aa17.08■□□□□ 0.32
DDX11-227ENST00000544652 GOLGA2Q08379 1002 aa17.07■□□□□ 0.32
DDX11-227ENST00000544652 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
DDX11-227ENST00000544652 ZNF790Q6PG37 636 aa17.06■□□□□ 0.32
DDX11-227ENST00000544652 SPINK5Q9NQ38 1064 aaPredicted RBP17.06■□□□□ 0.32
DDX11-227ENST00000544652 ASAP1Q9ULH1 1129 aa17.06■□□□□ 0.32
DDX11-227ENST00000544652 HEG1Q9ULI3 1381 aa17.05■□□□□ 0.32
DDX11-227ENST00000544652 SLC39A6Q13433 755 aa17.05■□□□□ 0.32
DDX11-227ENST00000544652 CCDC125Q86Z20 511 aa17.05■□□□□ 0.32
DDX11-227ENST00000544652 TRMT2AQ8IZ69 625 aaKnown RBP17.05■□□□□ 0.32
DDX11-227ENST00000544652 SMARCC1Q92922 1105 aaPredicted RBP17.05■□□□□ 0.32
DDX11-227ENST00000544652 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
DDX11-227ENST00000544652 MIS18AQ9NYP9 233 aa17.05■□□□□ 0.32
DDX11-227ENST00000544652 MYH14Q7Z406 1995 aaKnown RBP17.05■□□□□ 0.32
DDX11-227ENST00000544652 PALLDQ8WX93 1383 aa17.04■□□□□ 0.32
DDX11-227ENST00000544652 PLSCR1O15162 318 aa17.04■□□□□ 0.32
DDX11-227ENST00000544652 KCNQ3O43525 872 aa17.04■□□□□ 0.32
DDX11-227ENST00000544652 SLFN5Q08AF3 891 aa17.04■□□□□ 0.32
DDX11-227ENST00000544652 TSPYL4Q9UJ04 414 aa17.04■□□□□ 0.32
DDX11-227ENST00000544652 E9PSI1 815 aa17.03■□□□□ 0.32
DDX11-227ENST00000544652 CDCA7LQ96GN5 454 aa17.03■□□□□ 0.32
DDX11-227ENST00000544652 LAS1LQ9Y4W2 734 aaKnown RBP17.03■□□□□ 0.32
DDX11-227ENST00000544652 QSER1Q2KHR3 1735 aa17.03■□□□□ 0.32
DDX11-227ENST00000544652 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
DDX11-227ENST00000544652 FANCIQ9NVI1 1328 aa17.02■□□□□ 0.32
DDX11-227ENST00000544652 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.32
DDX11-227ENST00000544652 TTC5Q8N0Z6 440 aa17.02■□□□□ 0.32
DDX11-227ENST00000544652 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
DDX11-227ENST00000544652 C4BP0C0L5 1744 aa17.01■□□□□ 0.31
DDX11-227ENST00000544652 UBR3Q6ZT12 1888 aa17.01■□□□□ 0.31
DDX11-227ENST00000544652 APBA3O96018 575 aa17.01■□□□□ 0.31
DDX11-227ENST00000544652 ZNF496Q96IT1 587 aaPredicted RBP17.01■□□□□ 0.31
DDX11-227ENST00000544652 VSIG10Q8N0Z9 540 aa17■□□□□ 0.31
DDX11-227ENST00000544652 UPF1Q92900 1129 aaKnown RBP eCLIP17■□□□□ 0.31
DDX11-227ENST00000544652 TSR2Q969E8 191 aaKnown RBP17■□□□□ 0.31
DDX11-227ENST00000544652 YTHDC1Q96MU7 727 aaKnown RBP17■□□□□ 0.31
DDX11-227ENST00000544652 FMNL2Q96PY5 1086 aa17■□□□□ 0.31
DDX11-227ENST00000544652 LOC102724428A0A0B4J2F2 783 aa16.99■□□□□ 0.31
DDX11-227ENST00000544652 SIK1P57059 783 aa16.99■□□□□ 0.31
DDX11-227ENST00000544652 DUSP27Q5VZP5 1158 aa16.99■□□□□ 0.31
DDX11-227ENST00000544652 SLC4A9Q96Q91 983 aa16.99■□□□□ 0.31
DDX11-227ENST00000544652 SF3B2Q13435 895 aaKnown RBP16.98■□□□□ 0.31
DDX11-227ENST00000544652 SOS1Q07889 1333 aaPredicted RBP16.97■□□□□ 0.31
DDX11-227ENST00000544652 PTCD1O75127 700 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms