RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 KIF3CO14782 793 aa13.32□□□□□ -0.28
MDH1-216ENST00000544381 EMP3P54852 163 aa13.32□□□□□ -0.28
MDH1-216ENST00000544381 TTC21AQ8NDW8 1320 aa13.32□□□□□ -0.28
MDH1-216ENST00000544381 LMO7Q8WWI1 1683 aa13.31□□□□□ -0.28
MDH1-216ENST00000544381 EZH2Q15910 746 aaKnown RBP13.31□□□□□ -0.28
MDH1-216ENST00000544381 CAMKK2Q96RR4 588 aa13.31□□□□□ -0.28
MDH1-216ENST00000544381 NRKQ7Z2Y5 1582 aa13.3□□□□□ -0.28
MDH1-216ENST00000544381 A0A0G2JS52 829 aa13.3□□□□□ -0.28
MDH1-216ENST00000544381 MYT1Q01538 1121 aa13.3□□□□□ -0.28
MDH1-216ENST00000544381 SPATA31A1Q5TZJ5 1347 aa13.3□□□□□ -0.28
MDH1-216ENST00000544381 KIAA0232Q92628 1395 aa13.29□□□□□ -0.28
MDH1-216ENST00000544381 SSH2Q76I76 1423 aa13.28□□□□□ -0.28
MDH1-216ENST00000544381 HOXB1P14653 301 aaPredicted RBP13.28□□□□□ -0.28
MDH1-216ENST00000544381 CDAN1Q8IWY9 1227 aa13.28□□□□□ -0.28
MDH1-216ENST00000544381 NUDCQ9Y266 331 aa13.28□□□□□ -0.28
MDH1-216ENST00000544381 MAP2P11137 1827 aaKnown RBP13.28□□□□□ -0.28
MDH1-216ENST00000544381 CAMTA1Q9Y6Y1 1673 aa13.27□□□□□ -0.28
MDH1-216ENST00000544381 PEAK1Q9H792 1746 aa13.27□□□□□ -0.28
MDH1-216ENST00000544381 SENP3-EIF4A1A0A087X0R7 540 aa13.27□□□□□ -0.29
MDH1-216ENST00000544381 PPM1GO15355 546 aaPredicted RBP13.27□□□□□ -0.29
MDH1-216ENST00000544381 GTPBP6O43824 516 aaPredicted RBP13.27□□□□□ -0.29
MDH1-216ENST00000544381 ZSWIM6Q9HCJ5 1215 aa13.27□□□□□ -0.29
MDH1-216ENST00000544381 AATKQ6ZMQ8 1374 aa13.27□□□□□ -0.29
MDH1-216ENST00000544381 PARP4Q9UKK3 1724 aaKnown RBP13.26□□□□□ -0.29
MDH1-216ENST00000544381 POLKQ9UBT6 870 aa13.26□□□□□ -0.29
MDH1-216ENST00000544381 SALL2Q9Y467 1007 aaPredicted RBP13.26□□□□□ -0.29
MDH1-216ENST00000544381 GTF3C3Q9Y5Q9 886 aa13.26□□□□□ -0.29
MDH1-216ENST00000544381 SBF2Q86WG5 1849 aa13.26□□□□□ -0.29
MDH1-216ENST00000544381 DIAPH1O60610 1272 aaKnown RBP13.25□□□□□ -0.29
MDH1-216ENST00000544381 TRIM37O94972 964 aa13.25□□□□□ -0.29
MDH1-216ENST00000544381 CHRNA2Q15822 529 aa13.25□□□□□ -0.29
MDH1-216ENST00000544381 CCDC146Q8IYE0 955 aa13.25□□□□□ -0.29
MDH1-216ENST00000544381 OVOS2A0A0J9YW53 1432 aa13.24□□□□□ -0.29
MDH1-216ENST00000544381 OVOS2Q6IE36 1432 aa13.24□□□□□ -0.29
MDH1-216ENST00000544381 USP31Q70CQ4 1352 aa13.24□□□□□ -0.29
MDH1-216ENST00000544381 U2AF1L5P0DN76 240 aaPredicted RBP13.24□□□□□ -0.29
MDH1-216ENST00000544381 FBLN1P23142 703 aa13.24□□□□□ -0.29
MDH1-216ENST00000544381 U2AF1Q01081 240 aaKnown RBP eCLIP13.24□□□□□ -0.29
MDH1-216ENST00000544381 PRDM11Q9NQV5 511 aa13.24□□□□□ -0.29
MDH1-216ENST00000544381 RGPD3A6NKT7 1758 aaPredicted RBP13.24□□□□□ -0.29
MDH1-216ENST00000544381 RGPD4Q7Z3J3 1758 aa13.24□□□□□ -0.29
MDH1-216ENST00000544381 CASZ1Q86V15 1759 aa13.24□□□□□ -0.29
MDH1-216ENST00000544381 FAM205CA6NFA0 338 aa13.23□□□□□ -0.29
MDH1-216ENST00000544381 U2SURPO15042 1029 aaKnown RBP13.23□□□□□ -0.29
MDH1-216ENST00000544381 PDE3BQ13370 1112 aa13.23□□□□□ -0.29
MDH1-216ENST00000544381 ABTB2Q8N961 1025 aa13.23□□□□□ -0.29
MDH1-216ENST00000544381 EMILIN1Q9Y6C2 1016 aa13.23□□□□□ -0.29
MDH1-216ENST00000544381 UTRNP46939 3433 aa13.23□□□□□ -0.29
MDH1-216ENST00000544381 COL3A1P02461 1466 aaPredicted RBP13.23□□□□□ -0.29
MDH1-216ENST00000544381 WNK3Q9BYP7 1800 aa13.22□□□□□ -0.29
MDH1-216ENST00000544381 RRS1Q15050 365 aaKnown RBP13.22□□□□□ -0.29
MDH1-216ENST00000544381 NGEFQ8N5V2 710 aa13.22□□□□□ -0.29
MDH1-216ENST00000544381 RUNDC1Q96C34 613 aa13.22□□□□□ -0.29
MDH1-216ENST00000544381 LRRC37A3O60309 1634 aa13.22□□□□□ -0.29
MDH1-216ENST00000544381 SMG6Q86US8 1419 aaKnown RBP13.22□□□□□ -0.29
MDH1-216ENST00000544381 PIK3C2AO00443 1686 aa13.21□□□□□ -0.29
MDH1-216ENST00000544381 APAF1O14727 1248 aa13.21□□□□□ -0.29
MDH1-216ENST00000544381 FAM196AQ6ZSG2 479 aa13.21□□□□□ -0.29
MDH1-216ENST00000544381 PNNQ9H307 717 aaKnown RBP13.21□□□□□ -0.29
MDH1-216ENST00000544381 USP19O94966 1318 aa13.2□□□□□ -0.3
MDH1-216ENST00000544381 NUTM2GQ5VZR2 741 aa13.2□□□□□ -0.3
MDH1-216ENST00000544381 GPR153Q6NV75 609 aa13.2□□□□□ -0.3
MDH1-216ENST00000544381 BARGINQ6ZT62 677 aa13.2□□□□□ -0.3
MDH1-216ENST00000544381 APBA3O96018 575 aa13.19□□□□□ -0.3
MDH1-216ENST00000544381 ZC3H6P61129 1189 aaKnown RBP13.19□□□□□ -0.3
MDH1-216ENST00000544381 HS3ST6Q96QI5 342 aa13.19□□□□□ -0.3
MDH1-216ENST00000544381 GPHNQ9NQX3 736 aaPredicted RBP13.19□□□□□ -0.3
MDH1-216ENST00000544381 STRN4Q9NRL3 753 aa13.19□□□□□ -0.3
MDH1-216ENST00000544381 COL18A1P39060 1754 aa13.19□□□□□ -0.3
MDH1-216ENST00000544381 CPDO75976 1380 aa13.19□□□□□ -0.3
MDH1-216ENST00000544381 COL5A2P05997 1499 aaPredicted RBP13.18□□□□□ -0.3
MDH1-216ENST00000544381 ARSIQ5FYB1 569 aa13.18□□□□□ -0.3
MDH1-216ENST00000544381 LARP1Q6PKG0 1096 aaKnown RBP13.18□□□□□ -0.3
MDH1-216ENST00000544381 USP54Q70EL1 1684 aa13.18□□□□□ -0.3
MDH1-216ENST00000544381 ERBB3P21860 1342 aa13.18□□□□□ -0.3
MDH1-216ENST00000544381 NEFLP07196 543 aa13.17□□□□□ -0.3
MDH1-216ENST00000544381 NEFMP07197 916 aa13.17□□□□□ -0.3
MDH1-216ENST00000544381 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
MDH1-216ENST00000544381 MAPK8IP3Q9UPT6 1336 aa13.17□□□□□ -0.3
MDH1-216ENST00000544381 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
MDH1-216ENST00000544381 FCHSD2O94868 740 aa13.16□□□□□ -0.3
MDH1-216ENST00000544381 IL13P35225 146 aa13.16□□□□□ -0.3
MDH1-216ENST00000544381 AMPHP49418 695 aa13.16□□□□□ -0.3
MDH1-216ENST00000544381 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
MDH1-216ENST00000544381 TCP11L2Q8N4U5 519 aa13.16□□□□□ -0.3
MDH1-216ENST00000544381 USP35Q9P2H5 1018 aa13.16□□□□□ -0.3
MDH1-216ENST00000544381 MAP3K19Q56UN5 1328 aa13.16□□□□□ -0.3
MDH1-216ENST00000544381 PTF1AQ7RTS3 328 aa13.15□□□□□ -0.3
MDH1-216ENST00000544381 KCNH5Q8NCM2 988 aa13.15□□□□□ -0.3
MDH1-216ENST00000544381 ANO8Q9HCE9 1232 aaPredicted RBP13.15□□□□□ -0.3
MDH1-216ENST00000544381 SLIT3O75094 1523 aa13.15□□□□□ -0.3
MDH1-216ENST00000544381 SLC34A2O95436 690 aa13.14□□□□□ -0.31
MDH1-216ENST00000544381 YY1P25490 414 aa13.14□□□□□ -0.31
MDH1-216ENST00000544381 FOXK1P85037 733 aa13.14□□□□□ -0.31
MDH1-216ENST00000544381 NEUROD2Q15784 382 aa13.14□□□□□ -0.31
MDH1-216ENST00000544381 SUPT16HQ9Y5B9 1047 aaKnown RBP13.14□□□□□ -0.31
MDH1-216ENST00000544381 FLT4P35916 1363 aa13.14□□□□□ -0.31
MDH1-216ENST00000544381 RGPD5Q99666 1765 aa13.14□□□□□ -0.31
MDH1-216ENST00000544381 PLPP6Q8IY26 295 aa13.13□□□□□ -0.31
MDH1-216ENST00000544381 CDCA7LQ96GN5 454 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms