RNA–Protein interactions for RNA: ENST00000544342.1

AL590560.1-203, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AL590560.1, Length 408 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL590560.1-203ENST00000544342 LINC00116Q8NCU8 138 aa11.14□□□□□ -0.63
AL590560.1-203ENST00000544342 RTCBQ9Y3I0 505 aaKnown RBP11.14□□□□□ -0.63
AL590560.1-203ENST00000544342 ARFGEF1Q9Y6D6 1849 aa11.14□□□□□ -0.63
AL590560.1-203ENST00000544342 WASHC2AQ641Q2 1341 aa11.13□□□□□ -0.63
AL590560.1-203ENST00000544342 BRCA1P38398 1863 aaKnown RBP11.13□□□□□ -0.63
AL590560.1-203ENST00000544342 TRAPPC3LQ5T215 181 aa11.13□□□□□ -0.63
AL590560.1-203ENST00000544342 CCDC87Q9NVE4 849 aa11.13□□□□□ -0.63
AL590560.1-203ENST00000544342 WWC3Q9ULE0 1092 aa11.13□□□□□ -0.63
AL590560.1-203ENST00000544342 EMILIN1Q9Y6C2 1016 aa11.13□□□□□ -0.63
AL590560.1-203ENST00000544342 PXDNLA1KZ92 1463 aa11.12□□□□□ -0.63
AL590560.1-203ENST00000544342 HSP90AB1P08238 724 aaKnown RBP11.12□□□□□ -0.63
AL590560.1-203ENST00000544342 PHKG2P15735 406 aa11.12□□□□□ -0.63
AL590560.1-203ENST00000544342 AMIGO3Q86WK7 504 aa11.12□□□□□ -0.63
AL590560.1-203ENST00000544342 ASAP1Q9ULH1 1129 aa11.12□□□□□ -0.63
AL590560.1-203ENST00000544342 BCS1LQ9Y276 419 aa11.12□□□□□ -0.63
AL590560.1-203ENST00000544342 C4AP0C0L4 1744 aa11.12□□□□□ -0.63
AL590560.1-203ENST00000544342 COL5A3P25940 1745 aaPredicted RBP11.12□□□□□ -0.63
AL590560.1-203ENST00000544342 KIAA1551Q9HCM1 1747 aa11.12□□□□□ -0.63
AL590560.1-203ENST00000544342 ERVV-2B6SEH9 535 aa11.11□□□□□ -0.63
AL590560.1-203ENST00000544342 RC3H1Q5TC82 1133 aaKnown RBP11.11□□□□□ -0.63
AL590560.1-203ENST00000544342 C16orf71Q8IYS4 520 aaPredicted RBP11.11□□□□□ -0.63
AL590560.1-203ENST00000544342 EYA1Q99502 592 aa11.11□□□□□ -0.63
AL590560.1-203ENST00000544342 C10orf71Q711Q0 1435 aa11.1□□□□□ -0.63
AL590560.1-203ENST00000544342 WDR90Q96KV7 1748 aa11.1□□□□□ -0.63
AL590560.1-203ENST00000544342 RFC4P35249 363 aa11.1□□□□□ -0.63
AL590560.1-203ENST00000544342 ITPK1Q13572 414 aa11.1□□□□□ -0.63
AL590560.1-203ENST00000544342 ARHGAP27Q6ZUM4 889 aa11.1□□□□□ -0.63
AL590560.1-203ENST00000544342 ATG3Q9NT62 314 aa11.1□□□□□ -0.63
AL590560.1-203ENST00000544342 PARP3Q9Y6F1 533 aa11.1□□□□□ -0.63
AL590560.1-203ENST00000544342 CNTNAP4Q9C0A0 1308 aa11.09□□□□□ -0.63
AL590560.1-203ENST00000544342 KDRP35968 1356 aa11.09□□□□□ -0.63
AL590560.1-203ENST00000544342 FCHSD2O94868 740 aa11.09□□□□□ -0.63
AL590560.1-203ENST00000544342 SMIM5Q71RC9 77 aa11.09□□□□□ -0.63
AL590560.1-203ENST00000544342 DCAF5Q96JK2 942 aa11.09□□□□□ -0.63
AL590560.1-203ENST00000544342 RBM42Q9BTD8 480 aaKnown RBP11.09□□□□□ -0.63
AL590560.1-203ENST00000544342 A0A0G2JLW4 131 aa11.08□□□□□ -0.64
AL590560.1-203ENST00000544342 PLEKHO1Q53GL0 409 aaPredicted RBP11.08□□□□□ -0.64
AL590560.1-203ENST00000544342 RBM46Q8TBY0 533 aaKnown RBP11.08□□□□□ -0.64
AL590560.1-203ENST00000544342 CARD14Q9BXL6 1004 aa11.08□□□□□ -0.64
AL590560.1-203ENST00000544342 MYH14Q7Z406 1995 aaKnown RBP11.08□□□□□ -0.64
AL590560.1-203ENST00000544342 KDM2BQ8NHM5 1336 aa11.08□□□□□ -0.64
AL590560.1-203ENST00000544342 TNRC6CQ9HCJ0 1690 aaKnown RBP11.08□□□□□ -0.64
AL590560.1-203ENST00000544342 RPS6KA4O75676 772 aa11.07□□□□□ -0.64
AL590560.1-203ENST00000544342 FSTL1Q12841 308 aa11.07□□□□□ -0.64
AL590560.1-203ENST00000544342 AMOTQ4VCS5 1084 aa11.07□□□□□ -0.64
AL590560.1-203ENST00000544342 ARHGEF1Q92888 912 aaKnown RBP11.07□□□□□ -0.64
AL590560.1-203ENST00000544342 PIM2Q9P1W9 311 aa11.07□□□□□ -0.64
AL590560.1-203ENST00000544342 POLKQ9UBT6 870 aa11.07□□□□□ -0.64
AL590560.1-203ENST00000544342 SBF1O95248 1867 aa11.06□□□□□ -0.64
AL590560.1-203ENST00000544342 GYS1P13807 737 aa11.06□□□□□ -0.64
AL590560.1-203ENST00000544342 DPEP1P16444 411 aa11.06□□□□□ -0.64
AL590560.1-203ENST00000544342 CABP4P57796 275 aa11.06□□□□□ -0.64
AL590560.1-203ENST00000544342 C1orf141Q5JVX7 400 aa11.06□□□□□ -0.64
AL590560.1-203ENST00000544342 PCGF6Q9BYE7 350 aa11.06□□□□□ -0.64
AL590560.1-203ENST00000544342 EIF4A2Q14240 407 aaKnown RBP11.05□□□□□ -0.64
AL590560.1-203ENST00000544342 DALRD3Q5D0E6 543 aaKnown RBP11.05□□□□□ -0.64
AL590560.1-203ENST00000544342 C9orf131Q5VYM1 1079 aa11.05□□□□□ -0.64
AL590560.1-203ENST00000544342 DNAJC5GQ8N7S2 189 aa11.05□□□□□ -0.64
AL590560.1-203ENST00000544342 NMRK2Q9NPI5 230 aa11.05□□□□□ -0.64
AL590560.1-203ENST00000544342 ZNF530Q6P9A1 599 aaPredicted RBP11.04□□□□□ -0.64
AL590560.1-203ENST00000544342 ZC3H4Q9UPT8 1303 aaKnown RBP11.04□□□□□ -0.64
AL590560.1-203ENST00000544342 MTHFSP49914 203 aa11.03□□□□□ -0.64
AL590560.1-203ENST00000544342 KLRG1Q96E93 195 aa11.03□□□□□ -0.64
AL590560.1-203ENST00000544342 TIMELESSQ9UNS1 1208 aa11.03□□□□□ -0.64
AL590560.1-203ENST00000544342 SCN11AQ9UI33 1791 aa11.03□□□□□ -0.64
AL590560.1-203ENST00000544342 ZPR1O75312 459 aa11.02□□□□□ -0.65
AL590560.1-203ENST00000544342 TNNT2P45379 298 aaPredicted RBP11.02□□□□□ -0.65
AL590560.1-203ENST00000544342 CRKLP46109 303 aaKnown RBP11.02□□□□□ -0.65
AL590560.1-203ENST00000544342 SLC4A9Q96Q91 983 aa11.02□□□□□ -0.65
AL590560.1-203ENST00000544342 RNF181Q9P0P0 153 aa11.02□□□□□ -0.65
AL590560.1-203ENST00000544342 USP42Q9H9J4 1324 aaKnown RBP11.02□□□□□ -0.65
AL590560.1-203ENST00000544342 KDM6AO15550 1401 aaPredicted RBP11.01□□□□□ -0.65
AL590560.1-203ENST00000544342 KCPQ6ZWJ8 1503 aa11.01□□□□□ -0.65
AL590560.1-203ENST00000544342 VIRMAQ69YN4 1812 aaKnown RBP11.01□□□□□ -0.65
AL590560.1-203ENST00000544342 PTCD1O75127 700 aaKnown RBP11.01□□□□□ -0.65
AL590560.1-203ENST00000544342 KCNA3P22001 575 aa11.01□□□□□ -0.65
AL590560.1-203ENST00000544342 JMYQ8N9B5 988 aa11.01□□□□□ -0.65
AL590560.1-203ENST00000544342 SMC1BQ8NDV3 1235 aa11.01□□□□□ -0.65
AL590560.1-203ENST00000544342 TJP1Q07157 1748 aa11.01□□□□□ -0.65
AL590560.1-203ENST00000544342 CCDC88AQ3V6T2 1871 aa11□□□□□ -0.65
AL590560.1-203ENST00000544342 PCNTO95613 3336 aa11□□□□□ -0.65
AL590560.1-203ENST00000544342 POLR3GLQ9BT43 218 aa11□□□□□ -0.65
AL590560.1-203ENST00000544342 AFDNP55196 1824 aaKnown RBP11□□□□□ -0.65
AL590560.1-203ENST00000544342 DLEC1Q9Y238 1755 aa10.99□□□□□ -0.65
AL590560.1-203ENST00000544342 FKBP8Q14318 412 aa10.99□□□□□ -0.65
AL590560.1-203ENST00000544342 NFATC2IPQ8NCF5 419 aa10.99□□□□□ -0.65
AL590560.1-203ENST00000544342 TRIM26Q12899 539 aaPredicted RBP10.98□□□□□ -0.65
AL590560.1-203ENST00000544342 RRAGCQ9HB90 399 aa10.98□□□□□ -0.65
AL590560.1-203ENST00000544342 SRP68Q9UHB9 627 aaKnown RBP10.98□□□□□ -0.65
AL590560.1-203ENST00000544342 POLRMTO00411 1230 aaKnown RBP10.97□□□□□ -0.65
AL590560.1-203ENST00000544342 VEGFAP15692 232 aaPredicted RBP10.97□□□□□ -0.65
AL590560.1-203ENST00000544342 LMNB1P20700 586 aa10.97□□□□□ -0.65
AL590560.1-203ENST00000544342 CHRNA5P30532 468 aa10.97□□□□□ -0.65
AL590560.1-203ENST00000544342 DDR1Q08345 913 aa10.97□□□□□ -0.65
AL590560.1-203ENST00000544342 TIAM2Q8IVF5 1701 aa10.97□□□□□ -0.65
AL590560.1-203ENST00000544342 NRXN2Q9P2S2 1712 aa10.97□□□□□ -0.65
AL590560.1-203ENST00000544342 DICER1Q9UPY3 1922 aaKnown RBP10.96□□□□□ -0.65
AL590560.1-203ENST00000544342 ADAMTS7Q9UKP4 1686 aa10.96□□□□□ -0.65
AL590560.1-203ENST00000544342 TM4SF1P30408 202 aa10.96□□□□□ -0.65
AL590560.1-203ENST00000544342 AKAP4Q5JQC9 854 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms