RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ABL1P00519 1130 aa6.34□□□□□ -1.39
SCFD1-207ENST00000544052 SMCPP49901 116 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-207ENST00000544052 CCDC125Q86Z20 511 aa6.34□□□□□ -1.39
SCFD1-207ENST00000544052 ZNF784Q8NCA9 323 aaPredicted RBP6.34□□□□□ -1.39
SCFD1-207ENST00000544052 ZNF358Q9NW07 568 aa6.34□□□□□ -1.39
SCFD1-207ENST00000544052 SEPT3Q9UH03 358 aa6.34□□□□□ -1.39
SCFD1-207ENST00000544052 SIAH2O43255 324 aa6.34□□□□□ -1.4
SCFD1-207ENST00000544052 SCNN1DP51172 638 aa6.34□□□□□ -1.4
SCFD1-207ENST00000544052 FKBP5Q13451 457 aaPredicted RBP6.34□□□□□ -1.4
SCFD1-207ENST00000544052 CC2D2BQ6DHV5 1058 aa6.34□□□□□ -1.4
SCFD1-207ENST00000544052 WEE1P30291 646 aa6.33□□□□□ -1.4
SCFD1-207ENST00000544052 ZNF211Q13398 564 aaPredicted RBP6.33□□□□□ -1.4
SCFD1-207ENST00000544052 TREML4Q6UXN2 200 aa6.33□□□□□ -1.4
SCFD1-207ENST00000544052 SNIP1Q8TAD8 396 aaKnown RBP6.33□□□□□ -1.4
SCFD1-207ENST00000544052 ESF1Q9H501 851 aaKnown RBP6.33□□□□□ -1.4
SCFD1-207ENST00000544052 DACH1Q9UI36 760 aa6.33□□□□□ -1.4
SCFD1-207ENST00000544052 NISCHQ9Y2I1 1504 aa6.32□□□□□ -1.4
SCFD1-207ENST00000544052 NR3C2P08235 984 aa6.32□□□□□ -1.4
SCFD1-207ENST00000544052 MTMR3Q13615 1198 aa6.32□□□□□ -1.4
SCFD1-207ENST00000544052 TNS4Q8IZW8 715 aa6.32□□□□□ -1.4
SCFD1-207ENST00000544052 BIN2Q9UBW5 565 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-207ENST00000544052 LILRA1O75019 489 aa6.32□□□□□ -1.4
SCFD1-207ENST00000544052 GDF10P55107 478 aa6.32□□□□□ -1.4
SCFD1-207ENST00000544052 NOM1Q5C9Z4 860 aaKnown RBP6.32□□□□□ -1.4
SCFD1-207ENST00000544052 PPP1R26Q5T8A7 1209 aaPredicted RBP6.32□□□□□ -1.4
SCFD1-207ENST00000544052 MRGPRX2Q96LB1 330 aa6.32□□□□□ -1.4
SCFD1-207ENST00000544052 ETNK1Q9HBU6 452 aa6.32□□□□□ -1.4
SCFD1-207ENST00000544052 GMPR2Q9P2T1 348 aaKnown RBP6.32□□□□□ -1.4
SCFD1-207ENST00000544052 SERTAD1Q9UHV2 236 aa6.32□□□□□ -1.4
SCFD1-207ENST00000544052 C11orf95C9JLR9 678 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-207ENST00000544052 M0R2N6 131 aa6.31□□□□□ -1.4
SCFD1-207ENST00000544052 ADH1CP00326 375 aa6.31□□□□□ -1.4
SCFD1-207ENST00000544052 SMPD1P17405 629 aa6.31□□□□□ -1.4
SCFD1-207ENST00000544052 ADD1P35611 737 aaKnown RBP6.31□□□□□ -1.4
SCFD1-207ENST00000544052 NAA30Q147X3 362 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-207ENST00000544052 CCDC116Q8IYX3 515 aa6.31□□□□□ -1.4
SCFD1-207ENST00000544052 GTF3C2Q8WUA4 911 aaPredicted RBP6.31□□□□□ -1.4
SCFD1-207ENST00000544052 H3BRB1 525 aa6.3□□□□□ -1.4
SCFD1-207ENST00000544052 DNAJC14Q6Y2X3 702 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-207ENST00000544052 TUT1Q9H6E5 874 aaKnown RBP6.3□□□□□ -1.4
SCFD1-207ENST00000544052 RAB6BQ9NRW1 208 aa6.3□□□□□ -1.4
SCFD1-207ENST00000544052 DHX9Q08211 1270 aaKnown RBP6.3□□□□□ -1.4
SCFD1-207ENST00000544052 SCG3Q8WXD2 468 aaKnown RBP6.3□□□□□ -1.4
SCFD1-207ENST00000544052 TSPAN10Q9H1Z9 355 aaPredicted RBP6.3□□□□□ -1.4
SCFD1-207ENST00000544052 C21orf2O43822 256 aa6.29□□□□□ -1.4
SCFD1-207ENST00000544052 INHAP05111 366 aa6.29□□□□□ -1.4
SCFD1-207ENST00000544052 TBCELQ5QJ74 424 aa6.29□□□□□ -1.4
SCFD1-207ENST00000544052 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-207ENST00000544052 MPNDQ8N594 471 aa6.29□□□□□ -1.4
SCFD1-207ENST00000544052 CHMP7Q8WUX9 453 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-207ENST00000544052 DNMT3AQ9Y6K1 912 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-207ENST00000544052 EPHA4P54764 986 aa6.29□□□□□ -1.4
SCFD1-207ENST00000544052 ICMTO60725 284 aa6.28□□□□□ -1.4
SCFD1-207ENST00000544052 MARSP56192 900 aaKnown RBP6.28□□□□□ -1.4
SCFD1-207ENST00000544052 NR5A1Q13285 461 aa6.28□□□□□ -1.4
SCFD1-207ENST00000544052 ECM1Q16610 540 aa6.28□□□□□ -1.4
SCFD1-207ENST00000544052 AMOTL2Q9Y2J4 779 aa6.28□□□□□ -1.4
SCFD1-207ENST00000544052 ATAD2Q6PL18 1390 aa6.28□□□□□ -1.4
SCFD1-207ENST00000544052 J3QL48 77 aa6.27□□□□□ -1.41
SCFD1-207ENST00000544052 WASLO00401 505 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-207ENST00000544052 BACH1O14867 736 aa6.27□□□□□ -1.41
SCFD1-207ENST00000544052 GLYCTKQ8IVS8 523 aa6.27□□□□□ -1.41
SCFD1-207ENST00000544052 ARHGEF10LQ9HCE6 1279 aa6.27□□□□□ -1.41
SCFD1-207ENST00000544052 ATP13A2Q9NQ11 1180 aa6.27□□□□□ -1.41
SCFD1-207ENST00000544052 A0A1W2PRU2 124 aa6.27□□□□□ -1.41
SCFD1-207ENST00000544052 WFS1O76024 890 aa6.27□□□□□ -1.41
SCFD1-207ENST00000544052 ALDH1A1P00352 501 aa6.27□□□□□ -1.41
SCFD1-207ENST00000544052 IGFBP4P22692 258 aa6.27□□□□□ -1.41
SCFD1-207ENST00000544052 EGFL7Q9UHF1 273 aa6.27□□□□□ -1.41
SCFD1-207ENST00000544052 GNRH1P01148 92 aa6.26□□□□□ -1.41
SCFD1-207ENST00000544052 CYP2U1Q7Z449 544 aa6.26□□□□□ -1.41
SCFD1-207ENST00000544052 SENP2Q9HC62 589 aa6.26□□□□□ -1.41
SCFD1-207ENST00000544052 PTCD1O75127 700 aaKnown RBP6.26□□□□□ -1.41
SCFD1-207ENST00000544052 FKBP4Q02790 459 aaKnown RBP eCLIP6.26□□□□□ -1.41
SCFD1-207ENST00000544052 CBLBQ13191 982 aa6.26□□□□□ -1.41
SCFD1-207ENST00000544052 KDF1Q8NAX2 398 aaPredicted RBP6.26□□□□□ -1.41
SCFD1-207ENST00000544052 SLC4A9Q96Q91 983 aa6.26□□□□□ -1.41
SCFD1-207ENST00000544052 SAP130Q9H0E3 1048 aa6.26□□□□□ -1.41
SCFD1-207ENST00000544052 USP3Q9Y6I4 520 aa6.26□□□□□ -1.41
SCFD1-207ENST00000544052 UNCXA6NJT0 531 aa6.25□□□□□ -1.41
SCFD1-207ENST00000544052 FOXO3O43524 673 aa6.25□□□□□ -1.41
SCFD1-207ENST00000544052 IL2RAP01589 272 aa6.25□□□□□ -1.41
SCFD1-207ENST00000544052 ARHGAP4P98171 946 aa6.25□□□□□ -1.41
SCFD1-207ENST00000544052 NNTQ13423 1086 aa6.25□□□□□ -1.41
SCFD1-207ENST00000544052 HPS1Q92902 700 aa6.25□□□□□ -1.41
SCFD1-207ENST00000544052 SCHIP1Q9P0W5 487 aaPredicted RBP6.25□□□□□ -1.41
SCFD1-207ENST00000544052 EMILIN1Q9Y6C2 1016 aa6.25□□□□□ -1.41
SCFD1-207ENST00000544052 ANKRD33BA6NCL7 494 aa6.24□□□□□ -1.41
SCFD1-207ENST00000544052 A6NJY4 79 aa6.24□□□□□ -1.41
SCFD1-207ENST00000544052 E9PSI1 815 aa6.24□□□□□ -1.41
SCFD1-207ENST00000544052 SMTNP53814 917 aa6.24□□□□□ -1.41
SCFD1-207ENST00000544052 SLC9A9Q8IVB4 645 aa6.24□□□□□ -1.41
SCFD1-207ENST00000544052 CNKSR1Q969H4 720 aa6.24□□□□□ -1.41
SCFD1-207ENST00000544052 TRIM47Q96LD4 638 aa6.24□□□□□ -1.41
SCFD1-207ENST00000544052 PGPEP1Q9NXJ5 209 aa6.24□□□□□ -1.41
SCFD1-207ENST00000544052 PPP1R12BO60237 982 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-207ENST00000544052 FOXK2Q01167 660 aa6.24□□□□□ -1.41
SCFD1-207ENST00000544052 NFX1Q12986 1120 aaKnown RBP6.24□□□□□ -1.41
SCFD1-207ENST00000544052 ITPKCQ96DU7 683 aa6.24□□□□□ -1.41
SCFD1-207ENST00000544052 ESCO1Q5FWF5 840 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms