RNA–Protein interactions for RNA: ENST00000543601.5

FGD5-206, Transcript of FYVE, RhoGEF and PH domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene FGD5, Length 5,768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD5-206ENST00000543601 RAPGEF3O95398 923 aa17.34■□□□□ 0.37
FGD5-206ENST00000543601 IFIT1P09914 478 aaKnown RBP17.34■□□□□ 0.37
FGD5-206ENST00000543601 DDX11Q96FC9 970 aa17.34■□□□□ 0.37
FGD5-206ENST00000543601 POTEJP0CG39 1038 aa17.34■□□□□ 0.37
FGD5-206ENST00000543601 EXOC6BQ9Y2D4 811 aa17.34■□□□□ 0.37
FGD5-206ENST00000543601 TRIM21P19474 475 aaKnown RBP17.33■□□□□ 0.37
FGD5-206ENST00000543601 ALDH1L2Q3SY69 923 aa17.33■□□□□ 0.37
FGD5-206ENST00000543601 MCM4P33991 863 aa17.33■□□□□ 0.36
FGD5-206ENST00000543601 GBP2P32456 591 aaPredicted RBP17.33■□□□□ 0.36
FGD5-206ENST00000543601 RBM10P98175 930 aaKnown RBP17.33■□□□□ 0.36
FGD5-206ENST00000543601 CENPHQ9H3R5 247 aa17.32■□□□□ 0.36
FGD5-206ENST00000543601 TIAM1Q13009 1591 aa17.32■□□□□ 0.36
FGD5-206ENST00000543601 NEBLO76041 1014 aa17.32■□□□□ 0.36
FGD5-206ENST00000543601 POLR3DP05423 398 aaPredicted RBP17.32■□□□□ 0.36
FGD5-206ENST00000543601 EZRP15311 586 aaKnown RBP17.32■□□□□ 0.36
FGD5-206ENST00000543601 POLA1P09884 1462 aaPredicted RBP17.32■□□□□ 0.36
FGD5-206ENST00000543601 AMOTQ4VCS5 1084 aa17.32■□□□□ 0.36
FGD5-206ENST00000543601 TAX1BP1Q86VP1 789 aa17.32■□□□□ 0.36
FGD5-206ENST00000543601 SNAPC4Q5SXM2 1469 aa17.32■□□□□ 0.36
FGD5-206ENST00000543601 CCDC148Q8NFR7 591 aa17.32■□□□□ 0.36
FGD5-206ENST00000543601 ABCC11Q96J66 1382 aa17.32■□□□□ 0.36
FGD5-206ENST00000543601 CCDC141Q6ZP82 1450 aa17.32■□□□□ 0.36
FGD5-206ENST00000543601 MPNDQ8N594 471 aa17.32■□□□□ 0.36
FGD5-206ENST00000543601 CCDC196A0A1B0GTZ2 297 aa17.31■□□□□ 0.36
FGD5-206ENST00000543601 PRPF40BQ6NWY9 871 aaKnown RBP17.31■□□□□ 0.36
FGD5-206ENST00000543601 MCM10Q7L590 875 aa17.31■□□□□ 0.36
FGD5-206ENST00000543601 MYD88Q99836 296 aa17.31■□□□□ 0.36
FGD5-206ENST00000543601 MIS18AQ9NYP9 233 aa17.31■□□□□ 0.36
FGD5-206ENST00000543601 PIP4K2BP78356 416 aa17.31■□□□□ 0.36
FGD5-206ENST00000543601 FILIP1Q7Z7B0 1213 aa17.31■□□□□ 0.36
FGD5-206ENST00000543601 LRRFIP2Q9Y608 721 aaKnown RBP17.31■□□□□ 0.36
FGD5-206ENST00000543601 ZPR1O75312 459 aa17.31■□□□□ 0.36
FGD5-206ENST00000543601 TAF7Q15545 349 aaPredicted RBP17.31■□□□□ 0.36
FGD5-206ENST00000543601 CFAP100Q494V2 611 aa17.31■□□□□ 0.36
FGD5-206ENST00000543601 ARHGAP29Q52LW3 1261 aa17.31■□□□□ 0.36
FGD5-206ENST00000543601 DNAI2Q9GZS0 605 aa17.31■□□□□ 0.36
FGD5-206ENST00000543601 PHAXQ9H814 394 aaKnown RBP17.31■□□□□ 0.36
FGD5-206ENST00000543601 CCDC83Q8IWF9 413 aa17.3■□□□□ 0.36
FGD5-206ENST00000543601 MKNK2Q9HBH9 465 aa17.3■□□□□ 0.36
FGD5-206ENST00000543601 CRACR2BQ8N4Y2 399 aaPredicted RBP17.3■□□□□ 0.36
FGD5-206ENST00000543601 TSG101Q99816 390 aa17.3■□□□□ 0.36
FGD5-206ENST00000543601 HMGB1P09429 215 aaKnown RBP17.3■□□□□ 0.36
FGD5-206ENST00000543601 FAM193AP78312 1265 aa17.3■□□□□ 0.36
FGD5-206ENST00000543601 SH2B1Q9NRF2 756 aaPredicted RBP17.29■□□□□ 0.36
FGD5-206ENST00000543601 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
FGD5-206ENST00000543601 NAPBQ9H115 298 aa17.29■□□□□ 0.36
FGD5-206ENST00000543601 UQCRHLA0A096LP55 91 aa17.29■□□□□ 0.36
FGD5-206ENST00000543601 UQCRHP07919 91 aa17.29■□□□□ 0.36
FGD5-206ENST00000543601 CETN2P41208 172 aa17.29■□□□□ 0.36
FGD5-206ENST00000543601 HSP90AB3PQ58FF7 597 aa17.29■□□□□ 0.36
FGD5-206ENST00000543601 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
FGD5-206ENST00000543601 MINDY4BA8MYZ0 360 aa17.29■□□□□ 0.36
FGD5-206ENST00000543601 EPRSP07814 1512 aaKnown RBP17.29■□□□□ 0.36
FGD5-206ENST00000543601 MAP3K12Q12852 859 aa17.28■□□□□ 0.36
FGD5-206ENST00000543601 SSR1P43307 286 aaKnown RBP17.28■□□□□ 0.36
FGD5-206ENST00000543601 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.28■□□□□ 0.36
FGD5-206ENST00000543601 FKBP15Q5T1M5 1219 aa17.28■□□□□ 0.36
FGD5-206ENST00000543601 SLC5A1P13866 664 aa17.28■□□□□ 0.36
FGD5-206ENST00000543601 SPA17Q15506 151 aa17.28■□□□□ 0.36
FGD5-206ENST00000543601 ANO10Q9NW15 660 aa17.28■□□□□ 0.36
FGD5-206ENST00000543601 CAMK4Q16566 473 aa17.27■□□□□ 0.36
FGD5-206ENST00000543601 DZIP1Q86YF9 867 aaKnown RBP17.27■□□□□ 0.36
FGD5-206ENST00000543601 BOLA2Q9H3K6 86 aa17.27■□□□□ 0.36
FGD5-206ENST00000543601 IFIT5Q13325 482 aaKnown RBP17.27■□□□□ 0.36
FGD5-206ENST00000543601 PPP4R3AQ6IN85 833 aa17.27■□□□□ 0.36
FGD5-206ENST00000543601 CTCFLQ8NI51 663 aaPredicted RBP17.27■□□□□ 0.36
FGD5-206ENST00000543601 SCAND2PQ9GZW5 306 aaPredicted RBP17.27■□□□□ 0.36
FGD5-206ENST00000543601 KIF2AO00139 706 aaPredicted RBP17.27■□□□□ 0.36
FGD5-206ENST00000543601 SMARCA5O60264 1052 aaPredicted RBP17.27■□□□□ 0.36
FGD5-206ENST00000543601 PTCD1O75127 700 aaKnown RBP17.27■□□□□ 0.36
FGD5-206ENST00000543601 PLCD4Q9BRC7 762 aa17.26■□□□□ 0.35
FGD5-206ENST00000543601 ANKIB1Q9P2G1 1089 aa17.26■□□□□ 0.35
FGD5-206ENST00000543601 SYCE3A1L190 88 aa17.26■□□□□ 0.35
FGD5-206ENST00000543601 ZSCAN12O43309 604 aa17.26■□□□□ 0.35
FGD5-206ENST00000543601 THUMPD2Q9BTF0 503 aaKnown RBP17.26■□□□□ 0.35
FGD5-206ENST00000543601 C8orf76Q96K31 380 aa17.26■□□□□ 0.35
FGD5-206ENST00000543601 CCDC102AQ96A19 550 aa17.26■□□□□ 0.35
FGD5-206ENST00000543601 RAB34Q9BZG1 259 aa17.26■□□□□ 0.35
FGD5-206ENST00000543601 GBP3Q9H0R5 595 aa17.26■□□□□ 0.35
FGD5-206ENST00000543601 TOPBP1Q92547 1522 aa17.26■□□□□ 0.35
FGD5-206ENST00000543601 CCDC183Q5T5S1 534 aa17.25■□□□□ 0.35
FGD5-206ENST00000543601 FERMT3Q86UX7 667 aa17.25■□□□□ 0.35
FGD5-206ENST00000543601 RNF41Q9H4P4 317 aaPredicted RBP17.25■□□□□ 0.35
FGD5-206ENST00000543601 FGFR1OPO95684 399 aaKnown RBP17.25■□□□□ 0.35
FGD5-206ENST00000543601 SLF2Q8IX21 1173 aa17.25■□□□□ 0.35
FGD5-206ENST00000543601 ZNF444Q8N0Y2 327 aaPredicted RBP17.25■□□□□ 0.35
FGD5-206ENST00000543601 HYPKQ9NX55 129 aa17.25■□□□□ 0.35
FGD5-206ENST00000543601 SLC12A7Q9Y666 1083 aa17.25■□□□□ 0.35
FGD5-206ENST00000543601 SFPQP23246 707 aaKnown RBP eCLIP17.25■□□□□ 0.35
FGD5-206ENST00000543601 TMEM266Q2M3C6 531 aa17.25■□□□□ 0.35
FGD5-206ENST00000543601 CUL5Q93034 780 aa17.25■□□□□ 0.35
FGD5-206ENST00000543601 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
FGD5-206ENST00000543601 IQCA1Q86XH1 822 aa17.24■□□□□ 0.35
FGD5-206ENST00000543601 NKTRP30414 1462 aaKnown RBP17.24■□□□□ 0.35
FGD5-206ENST00000543601 WAPLQ7Z5K2 1190 aa17.24■□□□□ 0.35
FGD5-206ENST00000543601 DNAAF4Q8WXU2 420 aa17.24■□□□□ 0.35
FGD5-206ENST00000543601 UBXN4Q92575 508 aa17.24■□□□□ 0.35
FGD5-206ENST00000543601 ANKRD18BA2A2Z9 1011 aa17.24■□□□□ 0.35
FGD5-206ENST00000543601 ZNF213O14771 459 aa17.24■□□□□ 0.35
FGD5-206ENST00000543601 SSRP1Q08945 709 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms