RNA–Protein interactions for RNA: ENST00000543585.1

SCNN1A-220, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-220ENST00000543585 PTGER2P43116 358 aa21.25■□□□□ 0.99
SCNN1A-220ENST00000543585 SIK1P57059 783 aa21.25■□□□□ 0.99
SCNN1A-220ENST00000543585 SLC4A9Q96Q91 983 aa21.25■□□□□ 0.99
SCNN1A-220ENST00000543585 RSPH6AQ9H0K4 717 aa21.25■□□□□ 0.99
SCNN1A-220ENST00000543585 LGR6Q9HBX8 967 aa21.25■□□□□ 0.99
SCNN1A-220ENST00000543585 ATF5Q9Y2D1 282 aaPredicted RBP21.25■□□□□ 0.99
SCNN1A-220ENST00000543585 UBR2Q8IWV8 1755 aa21.24■□□□□ 0.99
SCNN1A-220ENST00000543585 ZEB1P37275 1124 aaPredicted RBP21.24■□□□□ 0.99
SCNN1A-220ENST00000543585 ITPK1Q13572 414 aa21.24■□□□□ 0.99
SCNN1A-220ENST00000543585 AMIGO3Q86WK7 504 aa21.24■□□□□ 0.99
SCNN1A-220ENST00000543585 CICQ96RK0 1608 aaPredicted RBP21.24■□□□□ 0.99
SCNN1A-220ENST00000543585 CABP4P57796 275 aa21.23■□□□□ 0.99
SCNN1A-220ENST00000543585 NFATC2IPQ8NCF5 419 aa21.23■□□□□ 0.99
SCNN1A-220ENST00000543585 PHACTR3Q96KR7 559 aa21.23■□□□□ 0.99
SCNN1A-220ENST00000543585 SGIP1Q9BQI5 828 aa21.23■□□□□ 0.99
SCNN1A-220ENST00000543585 TFCP2L1Q9NZI6 479 aa21.23■□□□□ 0.99
SCNN1A-220ENST00000543585 RNMTO43148 476 aaKnown RBP21.22■□□□□ 0.99
SCNN1A-220ENST00000543585 LINC00116Q8NCU8 138 aa21.22■□□□□ 0.99
SCNN1A-220ENST00000543585 PRKAR2BP31323 418 aa21.21■□□□□ 0.99
SCNN1A-220ENST00000543585 SMIM5Q71RC9 77 aa21.21■□□□□ 0.99
SCNN1A-220ENST00000543585 MTFR1LQ9H019 292 aa21.21■□□□□ 0.99
SCNN1A-220ENST00000543585 COL23A1Q86Y22 540 aaPredicted RBP21.2■□□□□ 0.98
SCNN1A-220ENST00000543585 U2AF1L5P0DN76 240 aaPredicted RBP21.19■□□□□ 0.98
SCNN1A-220ENST00000543585 U2AF1Q01081 240 aaKnown RBP eCLIP21.19■□□□□ 0.98
SCNN1A-220ENST00000543585 SLC52A2Q9HAB3 445 aa21.19■□□□□ 0.98
SCNN1A-220ENST00000543585 NUDCQ9Y266 331 aa21.19■□□□□ 0.98
SCNN1A-220ENST00000543585 ATP6V1AP38606 617 aa21.18■□□□□ 0.98
SCNN1A-220ENST00000543585 MAP3K5Q99683 1374 aa21.18■□□□□ 0.98
SCNN1A-220ENST00000543585 KCPQ6ZWJ8 1503 aa21.18■□□□□ 0.98
SCNN1A-220ENST00000543585 C4AP0C0L4 1744 aa21.18■□□□□ 0.98
SCNN1A-220ENST00000543585 RBM42Q9BTD8 480 aaKnown RBP21.17■□□□□ 0.98
SCNN1A-220ENST00000543585 RALBP1Q15311 655 aa21.16■□□□□ 0.98
SCNN1A-220ENST00000543585 IL17REQ8NFR9 667 aa21.16■□□□□ 0.98
SCNN1A-220ENST00000543585 GAS2L2Q8NHY3 880 aa21.16■□□□□ 0.98
SCNN1A-220ENST00000543585 SLC16A10Q8TF71 515 aa21.15■□□□□ 0.98
SCNN1A-220ENST00000543585 PPP1R1BQ9UD71 204 aaPredicted RBP21.15■□□□□ 0.98
SCNN1A-220ENST00000543585 PTCD1O75127 700 aaKnown RBP21.14■□□□□ 0.97
SCNN1A-220ENST00000543585 FCHSD2O94868 740 aa21.14■□□□□ 0.97
SCNN1A-220ENST00000543585 SLC39A6Q13433 755 aa21.14■□□□□ 0.97
SCNN1A-220ENST00000543585 AK7Q96M32 723 aa21.14■□□□□ 0.97
SCNN1A-220ENST00000543585 GNAT3A8MTJ3 354 aa21.13■□□□□ 0.97
SCNN1A-220ENST00000543585 CEMIPQ8WUJ3 1361 aa21.12■□□□□ 0.97
SCNN1A-220ENST00000543585 MYBBP1AQ9BQG0 1328 aaKnown RBP21.11■□□□□ 0.97
SCNN1A-220ENST00000543585 MSH5O43196 834 aa21.11■□□□□ 0.97
SCNN1A-220ENST00000543585 PHF14O94880 888 aa21.11■□□□□ 0.97
SCNN1A-220ENST00000543585 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.1■□□□□ 0.97
SCNN1A-220ENST00000543585 MSL1Q68DK7 614 aa21.1■□□□□ 0.97
SCNN1A-220ENST00000543585 PLEKHF1Q96S99 279 aa21.1■□□□□ 0.97
SCNN1A-220ENST00000543585 CNTNAP4Q9C0A0 1308 aa21.09■□□□□ 0.97
SCNN1A-220ENST00000543585 GNPATO15228 680 aa21.09■□□□□ 0.97
SCNN1A-220ENST00000543585 ARXQ96QS3 562 aa21.09■□□□□ 0.97
SCNN1A-220ENST00000543585 HMGB2P26583 209 aaKnown RBP21.08■□□□□ 0.97
SCNN1A-220ENST00000543585 SSFA2P28290 1259 aa21.08■□□□□ 0.97
SCNN1A-220ENST00000543585 FLAD1Q8NFF5 587 aa21.08■□□□□ 0.97
SCNN1A-220ENST00000543585 FHDC1Q9C0D6 1143 aaPredicted RBP21.08■□□□□ 0.97
SCNN1A-220ENST00000543585 PRKRIP1Q9H875 184 aaPredicted RBP21.08■□□□□ 0.97
SCNN1A-220ENST00000543585 RC3H1Q5TC82 1133 aaKnown RBP21.07■□□□□ 0.96
SCNN1A-220ENST00000543585 KDM3BQ7LBC6 1761 aa21.06■□□□□ 0.96
SCNN1A-220ENST00000543585 MCM10Q7L590 875 aa21.06■□□□□ 0.96
SCNN1A-220ENST00000543585 DNAJC10Q8IXB1 793 aa21.06■□□□□ 0.96
SCNN1A-220ENST00000543585 CRKLP46109 303 aaKnown RBP21.05■□□□□ 0.96
SCNN1A-220ENST00000543585 DCTN1Q14203 1278 aa21.05■□□□□ 0.96
SCNN1A-220ENST00000543585 TEFQ10587 303 aa21.04■□□□□ 0.96
SCNN1A-220ENST00000543585 SYT17Q9BSW7 474 aa21.04■□□□□ 0.96
SCNN1A-220ENST00000543585 ZNF316A6NFI3 1004 aaPredicted RBP21.03■□□□□ 0.96
SCNN1A-220ENST00000543585 KCNQ3O43525 872 aa21.03■□□□□ 0.96
SCNN1A-220ENST00000543585 INTS5Q6P9B9 1019 aaKnown RBP21.03■□□□□ 0.96
SCNN1A-220ENST00000543585 KIF13BQ9NQT8 1826 aa21.02■□□□□ 0.96
SCNN1A-220ENST00000543585 RPS6KA4O75676 772 aa21.02■□□□□ 0.96
SCNN1A-220ENST00000543585 POLD1P28340 1107 aa21.02■□□□□ 0.96
SCNN1A-220ENST00000543585 ZNF496Q96IT1 587 aaPredicted RBP21.02■□□□□ 0.96
SCNN1A-220ENST00000543585 RTCBQ9Y3I0 505 aaKnown RBP21.02■□□□□ 0.96
SCNN1A-220ENST00000543585 CYP19A1P11511 503 aaPredicted RBP21.01■□□□□ 0.95
SCNN1A-220ENST00000543585 ZNF790Q6PG37 636 aa21.01■□□□□ 0.95
SCNN1A-220ENST00000543585 ARHGEF1Q92888 912 aaKnown RBP21.01■□□□□ 0.95
SCNN1A-220ENST00000543585 GOLGB1Q14789 3259 aaKnown RBP21.01■□□□□ 0.95
SCNN1A-220ENST00000543585 UTRNP46939 3433 aa21.01■□□□□ 0.95
SCNN1A-220ENST00000543585 HEG1Q9ULI3 1381 aa20.99■□□□□ 0.95
SCNN1A-220ENST00000543585 HTATSF1O43719 755 aaKnown RBP20.99■□□□□ 0.95
SCNN1A-220ENST00000543585 NFE2L2Q16236 605 aa20.99■□□□□ 0.95
SCNN1A-220ENST00000543585 TRAPPC3LQ5T215 181 aa20.99■□□□□ 0.95
SCNN1A-220ENST00000543585 VSIG10Q8N0Z9 540 aa20.99■□□□□ 0.95
SCNN1A-220ENST00000543585 KIAA1551Q9HCM1 1747 aa20.98■□□□□ 0.95
SCNN1A-220ENST00000543585 CHD4Q14839 1912 aa20.98■□□□□ 0.95
SCNN1A-220ENST00000543585 LAMB4A4D0S4 1761 aa20.98■□□□□ 0.95
SCNN1A-220ENST00000543585 ADRA2BP18089 450 aa20.98■□□□□ 0.95
SCNN1A-220ENST00000543585 TTC5Q8N0Z6 440 aa20.98■□□□□ 0.95
SCNN1A-220ENST00000543585 RTF1Q92541 710 aaKnown RBP20.98■□□□□ 0.95
SCNN1A-220ENST00000543585 CCDC87Q9NVE4 849 aa20.98■□□□□ 0.95
SCNN1A-220ENST00000543585 AFDNP55196 1824 aaKnown RBP20.97■□□□□ 0.95
SCNN1A-220ENST00000543585 BTBD11A6QL63 1104 aa20.97■□□□□ 0.95
SCNN1A-220ENST00000543585 NLGN2Q8NFZ4 835 aa20.97■□□□□ 0.95
SCNN1A-220ENST00000543585 ZBTB1Q9Y2K1 713 aa20.97■□□□□ 0.95
SCNN1A-220ENST00000543585 SOS1Q07889 1333 aaPredicted RBP20.97■□□□□ 0.95
SCNN1A-220ENST00000543585 GYS1P13807 737 aa20.96■□□□□ 0.95
SCNN1A-220ENST00000543585 KLHL34Q8N239 644 aa20.96■□□□□ 0.95
SCNN1A-220ENST00000543585 THUMPD2Q9BTF0 503 aaKnown RBP20.96■□□□□ 0.95
SCNN1A-220ENST00000543585 SRP68Q9UHB9 627 aaKnown RBP20.96■□□□□ 0.95
SCNN1A-220ENST00000543585 N4BP2Q86UW6 1770 aaPredicted RBP20.95■□□□□ 0.94
SCNN1A-220ENST00000543585 MAPK8IP3Q9UPT6 1336 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms