RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 MTHFSP49914 203 aa15.14■□□□□ 0.01
COPS7A-217ENST00000543537 FLAD1Q8NFF5 587 aa15.14■□□□□ 0.01
COPS7A-217ENST00000543537 ARXQ96QS3 562 aa15.14■□□□□ 0.01
COPS7A-217ENST00000543537 SYT17Q9BSW7 474 aa15.14■□□□□ 0.01
COPS7A-217ENST00000543537 TMOD3Q9NYL9 352 aa15.14■□□□□ 0.01
COPS7A-217ENST00000543537 LOC102724428A0A0B4J2F2 783 aa15.13■□□□□ 0.01
COPS7A-217ENST00000543537 SIK1P57059 783 aa15.13■□□□□ 0.01
COPS7A-217ENST00000543537 CCDC184Q52MB2 194 aa15.13■□□□□ 0.01
COPS7A-217ENST00000543537 AEBP1Q8IUX7 1158 aa15.13■□□□□ 0.01
COPS7A-217ENST00000543537 UTRNP46939 3433 aa15.13■□□□□ 0.01
COPS7A-217ENST00000543537 KDM6AO15550 1401 aaPredicted RBP15.12■□□□□ 0.01
COPS7A-217ENST00000543537 NEFLP07196 543 aa15.12■□□□□ 0.01
COPS7A-217ENST00000543537 SULT6B1Q6IMI4 303 aa15.12■□□□□ 0.01
COPS7A-217ENST00000543537 COL23A1Q86Y22 540 aaPredicted RBP15.12■□□□□ 0.01
COPS7A-217ENST00000543537 FHDC1Q9C0D6 1143 aaPredicted RBP15.12■□□□□ 0.01
COPS7A-217ENST00000543537 NUDCQ9Y266 331 aa15.12■□□□□ 0.01
COPS7A-217ENST00000543537 ZNF831Q5JPB2 1677 aa15.12■□□□□ 0.01
COPS7A-217ENST00000543537 ERICH6BQ5W0A0 696 aa15.11■□□□□ 0.01
COPS7A-217ENST00000543537 ATG3Q9NT62 314 aa15.11■□□□□ 0.01
COPS7A-217ENST00000543537 ASAP1Q9ULH1 1129 aa15.11■□□□□ 0.01
COPS7A-217ENST00000543537 C4BP0C0L5 1744 aa15.11■□□□□ 0.01
COPS7A-217ENST00000543537 POLD1P28340 1107 aa15.1■□□□□ 0.01
COPS7A-217ENST00000543537 CNGB1Q14028 1251 aaPredicted RBP15.1■□□□□ 0.01
COPS7A-217ENST00000543537 ZNF530Q6P9A1 599 aaPredicted RBP15.1■□□□□ 0.01
COPS7A-217ENST00000543537 COL3A1P02461 1466 aaPredicted RBP15.09■□□□□ 0.01
COPS7A-217ENST00000543537 DCAF8L1A6NGE4 600 aa15.08■□□□□ 0
COPS7A-217ENST00000543537 DIAPH1O60610 1272 aaKnown RBP15.08■□□□□ 0
COPS7A-217ENST00000543537 SSFA2P28290 1259 aa15.08■□□□□ 0
COPS7A-217ENST00000543537 C1orf141Q5JVX7 400 aa15.08■□□□□ 0
COPS7A-217ENST00000543537 UBR3Q6ZT12 1888 aa15.08■□□□□ 0
COPS7A-217ENST00000543537 ITPK1Q13572 414 aa15.07■□□□□ 0
COPS7A-217ENST00000543537 AKAP4Q5JQC9 854 aa15.07■□□□□ 0
COPS7A-217ENST00000543537 LINC00116Q8NCU8 138 aa15.07■□□□□ 0
COPS7A-217ENST00000543537 AK7Q96M32 723 aa15.07■□□□□ 0
COPS7A-217ENST00000543537 GTF3C3Q9Y5Q9 886 aa15.07■□□□□ 0
COPS7A-217ENST00000543537 RC3H1Q5TC82 1133 aaKnown RBP15.06■□□□□ 0
COPS7A-217ENST00000543537 AMIGO3Q86WK7 504 aa15.06■□□□□ 0
COPS7A-217ENST00000543537 SLC4A9Q96Q91 983 aa15.06■□□□□ 0
COPS7A-217ENST00000543537 ATP6V1AP38606 617 aa15.05■□□□□ -0
COPS7A-217ENST00000543537 CABP4P57796 275 aa15.05■□□□□ -0
COPS7A-217ENST00000543537 MRC1P22897 1456 aa15.05■□□□□ -0
COPS7A-217ENST00000543537 CICQ96RK0 1608 aaPredicted RBP15.05■□□□□ -0
COPS7A-217ENST00000543537 ADAMTS7Q9UKP4 1686 aa15.05■□□□□ -0
COPS7A-217ENST00000543537 SCN11AQ9UI33 1791 aa15.04■□□□□ -0
COPS7A-217ENST00000543537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.04■□□□□ -0
COPS7A-217ENST00000543537 CNTNAP4Q9C0A0 1308 aa15.03■□□□□ -0
COPS7A-217ENST00000543537 PELP1Q8IZL8 1130 aaKnown RBP15.03■□□□□ -0
COPS7A-217ENST00000543537 ADAMTS8Q9UP79 889 aa15.03■□□□□ -0
COPS7A-217ENST00000543537 NEFMP07197 916 aa15.02■□□□□ -0
COPS7A-217ENST00000543537 HMOX1P09601 288 aa15.02■□□□□ -0
COPS7A-217ENST00000543537 ADRA2BP18089 450 aa15.02■□□□□ -0
COPS7A-217ENST00000543537 NFATC2IPQ8NCF5 419 aa15.02■□□□□ -0
COPS7A-217ENST00000543537 COL5A3P25940 1745 aaPredicted RBP15.02□□□□□ -0.01
COPS7A-217ENST00000543537 MSH5O43196 834 aa15.01□□□□□ -0.01
COPS7A-217ENST00000543537 YY1P25490 414 aa15.01□□□□□ -0.01
COPS7A-217ENST00000543537 MTHFSDQ2M296 383 aaKnown RBP15.01□□□□□ -0.01
COPS7A-217ENST00000543537 SLC52A2Q9HAB3 445 aa15.01□□□□□ -0.01
COPS7A-217ENST00000543537 CD2APQ9Y5K6 639 aa15.01□□□□□ -0.01
COPS7A-217ENST00000543537 GOLGB1Q14789 3259 aaKnown RBP15□□□□□ -0.01
COPS7A-217ENST00000543537 GNPATO15228 680 aa15□□□□□ -0.01
COPS7A-217ENST00000543537 RNMTO43148 476 aaKnown RBP15□□□□□ -0.01
COPS7A-217ENST00000543537 RPS6KA4O75676 772 aa14.99□□□□□ -0.01
COPS7A-217ENST00000543537 MSL1Q68DK7 614 aa14.99□□□□□ -0.01
COPS7A-217ENST00000543537 RUNDC1Q96C34 613 aa14.99□□□□□ -0.01
COPS7A-217ENST00000543537 RBM42Q9BTD8 480 aaKnown RBP14.99□□□□□ -0.01
COPS7A-217ENST00000543537 LGR6Q9HBX8 967 aa14.99□□□□□ -0.01
COPS7A-217ENST00000543537 RTCBQ9Y3I0 505 aaKnown RBP14.99□□□□□ -0.01
COPS7A-217ENST00000543537 PHF14O94880 888 aa14.98□□□□□ -0.01
COPS7A-217ENST00000543537 MYH14Q7Z406 1995 aaKnown RBP14.97□□□□□ -0.01
COPS7A-217ENST00000543537 CCDC27Q2M243 656 aa14.97□□□□□ -0.01
COPS7A-217ENST00000543537 TRAPPC3LQ5T215 181 aa14.97□□□□□ -0.01
COPS7A-217ENST00000543537 SMIM5Q71RC9 77 aa14.97□□□□□ -0.01
COPS7A-217ENST00000543537 NLGN2Q8NFZ4 835 aa14.97□□□□□ -0.01
COPS7A-217ENST00000543537 GAS2L2Q8NHY3 880 aa14.97□□□□□ -0.01
COPS7A-217ENST00000543537 PTCD1O75127 700 aaKnown RBP14.96□□□□□ -0.01
COPS7A-217ENST00000543537 FCHSD2O94868 740 aa14.96□□□□□ -0.01
COPS7A-217ENST00000543537 VSIG10Q8N0Z9 540 aa14.96□□□□□ -0.01
COPS7A-217ENST00000543537 TJP1Q07157 1748 aa14.95□□□□□ -0.02
COPS7A-217ENST00000543537 U2SURPO15042 1029 aaKnown RBP14.95□□□□□ -0.02
COPS7A-217ENST00000543537 GOLGA2Q08379 1002 aa14.95□□□□□ -0.02
COPS7A-217ENST00000543537 NLGN1Q8N2Q7 840 aa14.95□□□□□ -0.02
COPS7A-217ENST00000543537 ARHGEF1Q92888 912 aaKnown RBP14.95□□□□□ -0.02
COPS7A-217ENST00000543537 RSPH6AQ9H0K4 717 aa14.95□□□□□ -0.02
COPS7A-217ENST00000543537 CHD4Q14839 1912 aa14.95□□□□□ -0.02
COPS7A-217ENST00000543537 KCPQ6ZWJ8 1503 aa14.95□□□□□ -0.02
COPS7A-217ENST00000543537 CEMIPQ8WUJ3 1361 aa14.95□□□□□ -0.02
COPS7A-217ENST00000543537 CRKLP46109 303 aaKnown RBP14.94□□□□□ -0.02
COPS7A-217ENST00000543537 GPR162Q16538 588 aa14.94□□□□□ -0.02
COPS7A-217ENST00000543537 VIRMAQ69YN4 1812 aaKnown RBP14.94□□□□□ -0.02
COPS7A-217ENST00000543537 GNAT3A8MTJ3 354 aa14.93□□□□□ -0.02
COPS7A-217ENST00000543537 GYS1P13807 737 aa14.93□□□□□ -0.02
COPS7A-217ENST00000543537 INTS5Q6P9B9 1019 aaKnown RBP14.93□□□□□ -0.02
COPS7A-217ENST00000543537 WDR63Q8IWG1 891 aa14.93□□□□□ -0.02
COPS7A-217ENST00000543537 IL17REQ8NFR9 667 aa14.93□□□□□ -0.02
COPS7A-217ENST00000543537 UBR2Q8IWV8 1755 aa14.93□□□□□ -0.02
COPS7A-217ENST00000543537 E9PSI1 815 aa14.92□□□□□ -0.02
COPS7A-217ENST00000543537 GRIN3BO60391 1043 aa14.92□□□□□ -0.02
COPS7A-217ENST00000543537 U2AF1L5P0DN76 240 aaPredicted RBP14.92□□□□□ -0.02
COPS7A-217ENST00000543537 U2AF1Q01081 240 aaKnown RBP eCLIP14.92□□□□□ -0.02
COPS7A-217ENST00000543537 KLHL34Q8N239 644 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms