RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 ZHX1Q9UKY1 873 aaPredicted RBP15.17■□□□□ 0.02
SMCR5-201ENST00000543475 A0A0U1RQG5 324 aaPredicted RBP15.16■□□□□ 0.02
SMCR5-201ENST00000543475 UPF3BQ9BZI7 483 aaKnown RBP15.16■□□□□ 0.02
SMCR5-201ENST00000543475 ATP7BP35670 1465 aa15.16■□□□□ 0.02
SMCR5-201ENST00000543475 GTF2F1P35269 517 aaKnown RBP eCLIP15.16■□□□□ 0.02
SMCR5-201ENST00000543475 DMTNQ08495 405 aa15.16■□□□□ 0.02
SMCR5-201ENST00000543475 TPRNQ4KMQ1 711 aa15.16■□□□□ 0.02
SMCR5-201ENST00000543475 CCDC183Q5T5S1 534 aa15.16■□□□□ 0.02
SMCR5-201ENST00000543475 NME9Q86XW9 330 aa15.16■□□□□ 0.02
SMCR5-201ENST00000543475 ZNF710Q8N1W2 664 aa15.16■□□□□ 0.02
SMCR5-201ENST00000543475 C17orf53Q8N3J3 647 aaPredicted RBP15.16■□□□□ 0.02
SMCR5-201ENST00000543475 RILPL2Q969X0 211 aa15.16■□□□□ 0.02
SMCR5-201ENST00000543475 KIF3AQ9Y496 699 aa15.16■□□□□ 0.02
SMCR5-201ENST00000543475 TRIM6-TRIM34B2RNG4 842 aa15.15■□□□□ 0.02
SMCR5-201ENST00000543475 RRS1Q15050 365 aaKnown RBP15.15■□□□□ 0.02
SMCR5-201ENST00000543475 SLC4A10Q6U841 1118 aa15.15■□□□□ 0.02
SMCR5-201ENST00000543475 EXOC6BQ9Y2D4 811 aa15.15■□□□□ 0.02
SMCR5-201ENST00000543475 SLC4A2P04920 1241 aa15.15■□□□□ 0.02
SMCR5-201ENST00000543475 UTP14CQ5TAP6 766 aaKnown RBP15.15■□□□□ 0.02
SMCR5-201ENST00000543475 HCLS1P14317 486 aaPredicted RBP15.14■□□□□ 0.01
SMCR5-201ENST00000543475 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
SMCR5-201ENST00000543475 CHL1O00533 1208 aa15.13■□□□□ 0.01
SMCR5-201ENST00000543475 LETM1O95202 739 aaPredicted RBP15.13■□□□□ 0.01
SMCR5-201ENST00000543475 ZSCAN20P17040 1043 aaPredicted RBP15.13■□□□□ 0.01
SMCR5-201ENST00000543475 CHMLP26374 656 aa15.13■□□□□ 0.01
SMCR5-201ENST00000543475 BCL11BQ9C0K0 894 aaPredicted RBP15.13■□□□□ 0.01
SMCR5-201ENST00000543475 MX1P20591 662 aa15.13■□□□□ 0.01
SMCR5-201ENST00000543475 CBX1P83916 185 aa15.13■□□□□ 0.01
SMCR5-201ENST00000543475 PLCB2Q00722 1185 aa15.13■□□□□ 0.01
SMCR5-201ENST00000543475 FKBP5Q13451 457 aaPredicted RBP15.13■□□□□ 0.01
SMCR5-201ENST00000543475 LRRCC1Q9C099 1032 aa15.13■□□□□ 0.01
SMCR5-201ENST00000543475 SRCIN1Q9C0H9 1055 aa15.13■□□□□ 0.01
SMCR5-201ENST00000543475 FAM177BA6PVY3 158 aa15.12■□□□□ 0.01
SMCR5-201ENST00000543475 MCM10Q7L590 875 aa15.12■□□□□ 0.01
SMCR5-201ENST00000543475 COG3Q96JB2 828 aa15.12■□□□□ 0.01
SMCR5-201ENST00000543475 SPTLC3Q9NUV7 552 aa15.12■□□□□ 0.01
SMCR5-201ENST00000543475 KIAA0232Q92628 1395 aa15.12■□□□□ 0.01
SMCR5-201ENST00000543475 PPP4R3BQ5MIZ7 849 aa15.12■□□□□ 0.01
SMCR5-201ENST00000543475 WAPLQ7Z5K2 1190 aa15.12■□□□□ 0.01
SMCR5-201ENST00000543475 AATKQ6ZMQ8 1374 aa15.12■□□□□ 0.01
SMCR5-201ENST00000543475 EDC4Q6P2E9 1401 aaKnown RBP15.12■□□□□ 0.01
SMCR5-201ENST00000543475 TMEM87AQ8NBN3 555 aa15.12■□□□□ 0.01
SMCR5-201ENST00000543475 CNPY2Q9Y2B0 182 aa15.12■□□□□ 0.01
SMCR5-201ENST00000543475 SSH2Q76I76 1423 aa15.11■□□□□ 0.01
SMCR5-201ENST00000543475 F6X3S4 739 aa15.11■□□□□ 0.01
SMCR5-201ENST00000543475 GNAI2P04899 355 aa15.11■□□□□ 0.01
SMCR5-201ENST00000543475 CCT4P50991 539 aaKnown RBP15.11■□□□□ 0.01
SMCR5-201ENST00000543475 ALKQ9UM73 1620 aa15.11■□□□□ 0.01
SMCR5-201ENST00000543475 KDM4AO75164 1064 aa15.11■□□□□ 0.01
SMCR5-201ENST00000543475 TMEM131LA2VDJ0 1609 aa15.1■□□□□ 0.01
SMCR5-201ENST00000543475 SULT6B1Q6IMI4 303 aa15.1■□□□□ 0.01
SMCR5-201ENST00000543475 AEBP1Q8IUX7 1158 aa15.1■□□□□ 0.01
SMCR5-201ENST00000543475 SALL3Q9BXA9 1300 aa15.1■□□□□ 0.01
SMCR5-201ENST00000543475 TUBGCP6Q96RT7 1819 aa15.1■□□□□ 0.01
SMCR5-201ENST00000543475 UBE2HP62256 183 aa15.1■□□□□ 0.01
SMCR5-201ENST00000543475 CHAF1AQ13111 956 aaPredicted RBP15.1■□□□□ 0.01
SMCR5-201ENST00000543475 BCL2L12Q9HB09 334 aa15.1■□□□□ 0.01
SMCR5-201ENST00000543475 RPAP1Q9BWH6 1393 aaPredicted RBP15.09■□□□□ 0.01
SMCR5-201ENST00000543475 ZSCAN22P10073 491 aaPredicted RBP15.08■□□□□ 0.01
SMCR5-201ENST00000543475 G2E3Q7L622 706 aa15.08■□□□□ 0.01
SMCR5-201ENST00000543475 DIAPH3Q9NSV4 1193 aa15.08■□□□□ 0.01
SMCR5-201ENST00000543475 ATP2B3Q16720 1220 aa15.08■□□□□ 0
SMCR5-201ENST00000543475 PDCL2Q8N4E4 241 aa15.08■□□□□ 0
SMCR5-201ENST00000543475 IL17RAQ96F46 866 aa15.08■□□□□ 0
SMCR5-201ENST00000543475 FIBPO43427 364 aa15.07■□□□□ 0
SMCR5-201ENST00000543475 GTPBP4Q9BZE4 634 aaKnown RBP15.07■□□□□ 0
SMCR5-201ENST00000543475 STAG3Q9UJ98 1225 aa15.07■□□□□ 0
SMCR5-201ENST00000543475 HSPA4P34932 840 aa15.07■□□□□ 0
SMCR5-201ENST00000543475 UNC5CLQ8IV45 518 aa15.07■□□□□ 0
SMCR5-201ENST00000543475 KIAA1524Q8TCG1 905 aa15.07■□□□□ 0
SMCR5-201ENST00000543475 MIS18AQ9NYP9 233 aa15.07■□□□□ 0
SMCR5-201ENST00000543475 ATP6V1DQ9Y5K8 247 aa15.07■□□□□ 0
SMCR5-201ENST00000543475 STX6O43752 255 aa15.06■□□□□ 0
SMCR5-201ENST00000543475 RAPGEF3O95398 923 aa15.06■□□□□ 0
SMCR5-201ENST00000543475 GIMAP6Q6P9H5 292 aa15.06■□□□□ 0
SMCR5-201ENST00000543475 TPM3P06753 285 aa15.06■□□□□ 0
SMCR5-201ENST00000543475 PNMA6EA0A0J9YXQ4 647 aa15.05■□□□□ 0
SMCR5-201ENST00000543475 SYT1P21579 422 aa15.05■□□□□ 0
SMCR5-201ENST00000543475 STAP2Q9UGK3 403 aa15.05■□□□□ 0
SMCR5-201ENST00000543475 PREX1Q8TCU6 1659 aa15.05■□□□□ -0
SMCR5-201ENST00000543475 GOLGA6L6A8MZA4 724 aa15.05■□□□□ -0
SMCR5-201ENST00000543475 RIOK3O14730 519 aaKnown RBP15.05■□□□□ -0
SMCR5-201ENST00000543475 EIF4A2Q14240 407 aaKnown RBP15.05■□□□□ -0
SMCR5-201ENST00000543475 SPC24Q8NBT2 197 aa15.05■□□□□ -0
SMCR5-201ENST00000543475 PYCARDQ9ULZ3 195 aa15.05■□□□□ -0
SMCR5-201ENST00000543475 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.05■□□□□ -0
SMCR5-201ENST00000543475 SPDYE4A6NLX3 237 aa15.04■□□□□ -0
SMCR5-201ENST00000543475 F13A1P00488 732 aa15.04■□□□□ -0
SMCR5-201ENST00000543475 GNAI3P08754 354 aa15.04■□□□□ -0
SMCR5-201ENST00000543475 IL25Q9H293 177 aa15.04■□□□□ -0
SMCR5-201ENST00000543475 SMC3Q9UQE7 1217 aa15.04■□□□□ -0
SMCR5-201ENST00000543475 EPB41L2O43491 1005 aaKnown RBP15.04■□□□□ -0
SMCR5-201ENST00000543475 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
SMCR5-201ENST00000543475 ATP8B2P98198 1209 aa15.04■□□□□ -0
SMCR5-201ENST00000543475 KCNF1Q9H3M0 494 aa15.04■□□□□ -0
SMCR5-201ENST00000543475 WASLO00401 505 aaPredicted RBP15.03■□□□□ -0
SMCR5-201ENST00000543475 LARP6Q9BRS8 491 aaKnown RBP15.03■□□□□ -0
SMCR5-201ENST00000543475 FUCA2Q9BTY2 467 aa15.03■□□□□ -0
SMCR5-201ENST00000543475 TSPYL4Q9UJ04 414 aa15.03■□□□□ -0
SMCR5-201ENST00000543475 STK31Q9BXU1 1019 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms