RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 RNMTO43148 476 aaKnown RBP21.7■■□□□ 1.06
CIT-212ENST00000543239 PDGFDQ9GZP0 370 aaPredicted RBP21.7■■□□□ 1.06
CIT-212ENST00000543239 MAP3K5Q99683 1374 aa21.7■■□□□ 1.06
CIT-212ENST00000543239 ZNF316A6NFI3 1004 aaPredicted RBP21.69■■□□□ 1.06
CIT-212ENST00000543239 NFATC2IPQ8NCF5 419 aa21.69■■□□□ 1.06
CIT-212ENST00000543239 SLC52A2Q9HAB3 445 aa21.69■■□□□ 1.06
CIT-212ENST00000543239 TFCP2L1Q9NZI6 479 aa21.69■■□□□ 1.06
CIT-212ENST00000543239 GNAT3A8MTJ3 354 aa21.68■■□□□ 1.06
CIT-212ENST00000543239 PHACTR3Q96KR7 559 aa21.68■■□□□ 1.06
CIT-212ENST00000543239 LGR6Q9HBX8 967 aa21.68■■□□□ 1.06
CIT-212ENST00000543239 C4BP0C0L5 1744 aa21.68■■□□□ 1.06
CIT-212ENST00000543239 VIRMAQ69YN4 1812 aaKnown RBP21.68■■□□□ 1.06
CIT-212ENST00000543239 TUBGCP6Q96RT7 1819 aa21.68■■□□□ 1.06
CIT-212ENST00000543239 PNPLA7Q6ZV29 1317 aa21.67■■□□□ 1.06
CIT-212ENST00000543239 ATP6V1AP38606 617 aa21.66■■□□□ 1.06
CIT-212ENST00000543239 MTFR1LQ9H019 292 aa21.66■■□□□ 1.06
CIT-212ENST00000543239 PRKRIP1Q9H875 184 aaPredicted RBP21.66■■□□□ 1.06
CIT-212ENST00000543239 ZBTB7AO95365 584 aa21.65■■□□□ 1.06
CIT-212ENST00000543239 SLC16A10Q8TF71 515 aa21.65■■□□□ 1.06
CIT-212ENST00000543239 RBM42Q9BTD8 480 aaKnown RBP21.64■■□□□ 1.05
CIT-212ENST00000543239 CICQ96RK0 1608 aaPredicted RBP21.63■■□□□ 1.05
CIT-212ENST00000543239 NEFMP07197 916 aa21.63■■□□□ 1.05
CIT-212ENST00000543239 ITPK1Q13572 414 aa21.63■■□□□ 1.05
CIT-212ENST00000543239 LINC00116Q8NCU8 138 aa21.63■■□□□ 1.05
CIT-212ENST00000543239 FLAD1Q8NFF5 587 aa21.63■■□□□ 1.05
CIT-212ENST00000543239 AK7Q96M32 723 aa21.63■■□□□ 1.05
CIT-212ENST00000543239 CEMIPQ8WUJ3 1361 aa21.62■■□□□ 1.05
CIT-212ENST00000543239 SLC4A9Q96Q91 983 aa21.62■■□□□ 1.05
CIT-212ENST00000543239 PNNQ9H307 717 aaKnown RBP21.62■■□□□ 1.05
CIT-212ENST00000543239 IL17REQ8NFR9 667 aa21.61■■□□□ 1.05
CIT-212ENST00000543239 PTCD1O75127 700 aaKnown RBP21.6■■□□□ 1.05
CIT-212ENST00000543239 PTGER2P43116 358 aa21.6■■□□□ 1.05
CIT-212ENST00000543239 TEFQ10587 303 aa21.6■■□□□ 1.05
CIT-212ENST00000543239 ATF5Q9Y2D1 282 aaPredicted RBP21.6■■□□□ 1.05
CIT-212ENST00000543239 COL5A3P25940 1745 aaPredicted RBP21.6■■□□□ 1.05
CIT-212ENST00000543239 UBR3Q6ZT12 1888 aa21.6■■□□□ 1.05
CIT-212ENST00000543239 PLEKHF1Q96S99 279 aa21.59■■□□□ 1.05
CIT-212ENST00000543239 PPP1R1BQ9UD71 204 aaPredicted RBP21.59■■□□□ 1.05
CIT-212ENST00000543239 SIPA1L3O60292 1781 aaPredicted RBP21.59■■□□□ 1.05
CIT-212ENST00000543239 COL24A1Q17RW2 1714 aa21.58■■□□□ 1.05
CIT-212ENST00000543239 HTATSF1O43719 755 aaKnown RBP21.58■■□□□ 1.05
CIT-212ENST00000543239 SSFA2P28290 1259 aa21.58■■□□□ 1.05
CIT-212ENST00000543239 COL23A1Q86Y22 540 aaPredicted RBP21.58■■□□□ 1.05
CIT-212ENST00000543239 RTF1Q92541 710 aaKnown RBP21.58■■□□□ 1.05
CIT-212ENST00000543239 SGIP1Q9BQI5 828 aa21.58■■□□□ 1.05
CIT-212ENST00000543239 CNTNAP4Q9C0A0 1308 aa21.57■■□□□ 1.04
CIT-212ENST00000543239 KCPQ6ZWJ8 1503 aa21.57■■□□□ 1.04
CIT-212ENST00000543239 RC3H1Q5TC82 1133 aaKnown RBP21.57■■□□□ 1.04
CIT-212ENST00000543239 TJP1Q07157 1748 aa21.57■■□□□ 1.04
CIT-212ENST00000543239 UBR2Q8IWV8 1755 aa21.56■■□□□ 1.04
CIT-212ENST00000543239 GNPATO15228 680 aa21.56■■□□□ 1.04
CIT-212ENST00000543239 SLC39A6Q13433 755 aa21.56■■□□□ 1.04
CIT-212ENST00000543239 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
CIT-212ENST00000543239 MSH5O43196 834 aa21.55■■□□□ 1.04
CIT-212ENST00000543239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.54■■□□□ 1.04
CIT-212ENST00000543239 AMIGO3Q86WK7 504 aa21.54■■□□□ 1.04
CIT-212ENST00000543239 TTC5Q8N0Z6 440 aa21.54■■□□□ 1.04
CIT-212ENST00000543239 VSIG10Q8N0Z9 540 aa21.54■■□□□ 1.04
CIT-212ENST00000543239 NFE2L2Q16236 605 aa21.53■■□□□ 1.04
CIT-212ENST00000543239 PHF14O94880 888 aa21.52■■□□□ 1.04
CIT-212ENST00000543239 POLD1P28340 1107 aa21.52■■□□□ 1.04
CIT-212ENST00000543239 WDR43Q15061 677 aaKnown RBP eCLIP21.52■■□□□ 1.04
CIT-212ENST00000543239 ZNF790Q6PG37 636 aa21.52■■□□□ 1.04
CIT-212ENST00000543239 MCM10Q7L590 875 aa21.52■■□□□ 1.04
CIT-212ENST00000543239 RTCBQ9Y3I0 505 aaKnown RBP21.52■■□□□ 1.04
CIT-212ENST00000543239 DLG5Q8TDM6 1919 aa21.51■■□□□ 1.03
CIT-212ENST00000543239 ADRA2BP18089 450 aa21.51■■□□□ 1.03
CIT-212ENST00000543239 CRKLP46109 303 aaKnown RBP21.51■■□□□ 1.03
CIT-212ENST00000543239 RPS6KA4O75676 772 aa21.5■■□□□ 1.03
CIT-212ENST00000543239 ARXQ96QS3 562 aa21.5■■□□□ 1.03
CIT-212ENST00000543239 BTBD11A6QL63 1104 aa21.49■■□□□ 1.03
CIT-212ENST00000543239 DCTN1Q14203 1278 aa21.49■■□□□ 1.03
CIT-212ENST00000543239 DNAJC10Q8IXB1 793 aa21.49■■□□□ 1.03
CIT-212ENST00000543239 MYH14Q7Z406 1995 aaKnown RBP21.48■■□□□ 1.03
CIT-212ENST00000543239 TRAPPC3LQ5T215 181 aa21.48■■□□□ 1.03
CIT-212ENST00000543239 SMIM5Q71RC9 77 aa21.48■■□□□ 1.03
CIT-212ENST00000543239 ZNF496Q96IT1 587 aaPredicted RBP21.48■■□□□ 1.03
CIT-212ENST00000543239 HEG1Q9ULI3 1381 aa21.48■■□□□ 1.03
CIT-212ENST00000543239 CYP19A1P11511 503 aaPredicted RBP21.47■■□□□ 1.03
CIT-212ENST00000543239 FMNL2Q96PY5 1086 aa21.47■■□□□ 1.03
CIT-212ENST00000543239 CCDC87Q9NVE4 849 aa21.47■■□□□ 1.03
CIT-212ENST00000543239 INTS5Q6P9B9 1019 aaKnown RBP21.46■■□□□ 1.03
CIT-212ENST00000543239 TEX13AQ9BXU3 409 aaPredicted RBP21.46■■□□□ 1.03
CIT-212ENST00000543239 ADAMTS8Q9UP79 889 aa21.46■■□□□ 1.03
CIT-212ENST00000543239 ANP32CO43423 234 aa21.45■■□□□ 1.02
CIT-212ENST00000543239 TAF7Q15545 349 aaPredicted RBP21.45■■□□□ 1.02
CIT-212ENST00000543239 MSL1Q68DK7 614 aa21.45■■□□□ 1.02
CIT-212ENST00000543239 RUNDC1Q96C34 613 aa21.45■■□□□ 1.02
CIT-212ENST00000543239 FHDC1Q9C0D6 1143 aaPredicted RBP21.45■■□□□ 1.02
CIT-212ENST00000543239 ARHGEF1Q92888 912 aaKnown RBP21.44■■□□□ 1.02
CIT-212ENST00000543239 C4AP0C0L4 1744 aa21.43■■□□□ 1.02
CIT-212ENST00000543239 STARD3NLO95772 234 aa21.43■■□□□ 1.02
CIT-212ENST00000543239 RFC4P35249 363 aa21.43■■□□□ 1.02
CIT-212ENST00000543239 TMPOP42166 694 aaKnown RBP21.43■■□□□ 1.02
CIT-212ENST00000543239 RIPK4P57078 832 aa21.43■■□□□ 1.02
CIT-212ENST00000543239 LMOD3Q0VAK6 560 aa21.43■■□□□ 1.02
CIT-212ENST00000543239 PNISRQ8TF01 805 aaKnown RBP21.43■■□□□ 1.02
CIT-212ENST00000543239 SYT17Q9BSW7 474 aa21.43■■□□□ 1.02
CIT-212ENST00000543239 KCNQ3O43525 872 aa21.42■■□□□ 1.02
CIT-212ENST00000543239 CCDC146Q8IYE0 955 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms