RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDH4-201ENST00000543233 LRRC7Q96NW7 1537 aa13.68□□□□□ -0.22
CDH4-201ENST00000543233 TMEM2Q9UHN6 1383 aa13.68□□□□□ -0.22
CDH4-201ENST00000543233 PRIM1P49642 420 aaKnown RBP13.68□□□□□ -0.22
CDH4-201ENST00000543233 EIF4A2Q14240 407 aaKnown RBP13.68□□□□□ -0.22
CDH4-201ENST00000543233 HOMEZQ8IX15 550 aa13.68□□□□□ -0.22
CDH4-201ENST00000543233 OGFRQ9NZT2 677 aa13.68□□□□□ -0.22
CDH4-201ENST00000543233 CPS1P31327 1500 aa13.68□□□□□ -0.22
CDH4-201ENST00000543233 GNAI1P63096 354 aa13.67□□□□□ -0.22
CDH4-201ENST00000543233 TMED8Q6PL24 325 aaPredicted RBP13.67□□□□□ -0.22
CDH4-201ENST00000543233 TTC21BQ7Z4L5 1316 aa13.67□□□□□ -0.22
CDH4-201ENST00000543233 FOXO3O43524 673 aa13.67□□□□□ -0.22
CDH4-201ENST00000543233 CT47B1P0C2W7 299 aaPredicted RBP13.67□□□□□ -0.22
CDH4-201ENST00000543233 SSFA2P28290 1259 aa13.67□□□□□ -0.22
CDH4-201ENST00000543233 ANKRD45Q5TZF3 282 aa13.67□□□□□ -0.22
CDH4-201ENST00000543233 TSPYL1Q9H0U9 437 aa13.67□□□□□ -0.22
CDH4-201ENST00000543233 EDC4Q6P2E9 1401 aaKnown RBP13.67□□□□□ -0.22
CDH4-201ENST00000543233 ZSCAN23Q3MJ62 389 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 MCTP1Q6DN14 999 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDH4-201ENST00000543233 PDLIM2Q96JY6 352 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 IL16Q14005 1332 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 GTF2A1P52655 376 aaPredicted RBP13.66□□□□□ -0.22
CDH4-201ENST00000543233 KLHL40Q2TBA0 621 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 ZBTB40Q9NUA8 1239 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 MMP14P50281 582 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 GPATCH11Q8N954 259 aa13.66□□□□□ -0.22
CDH4-201ENST00000543233 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
CDH4-201ENST00000543233 SLFN14P0C7P3 912 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 LMOD3Q0VAK6 560 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 AXDND1Q5T1B0 1012 aaPredicted RBP13.65□□□□□ -0.22
CDH4-201ENST00000543233 BANK1Q8NDB2 785 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 FEZ1Q99689 392 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 SPATA31D1Q6ZQQ2 1576 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 NECTIN2Q92692 538 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 RSPH14Q9UHP6 348 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 FAM135BQ49AJ0 1406 aa13.65□□□□□ -0.22
CDH4-201ENST00000543233 AGLP35573 1532 aa13.64□□□□□ -0.23
CDH4-201ENST00000543233 RBM25P49756 843 aaKnown RBP13.64□□□□□ -0.23
CDH4-201ENST00000543233 TOMM22Q9NS69 142 aa13.64□□□□□ -0.23
CDH4-201ENST00000543233 GEMIN8Q9NWZ8 242 aaKnown RBP13.64□□□□□ -0.23
CDH4-201ENST00000543233 AMPHP49418 695 aa13.64□□□□□ -0.23
CDH4-201ENST00000543233 NOLC1Q14978 699 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDH4-201ENST00000543233 RAB3GAP1Q15042 981 aa13.64□□□□□ -0.23
CDH4-201ENST00000543233 MRPL50Q8N5N7 158 aaKnown RBP13.64□□□□□ -0.23
CDH4-201ENST00000543233 CPSF1Q10570 1443 aaKnown RBP13.64□□□□□ -0.23
CDH4-201ENST00000543233 ATP7BP35670 1465 aa13.64□□□□□ -0.23
CDH4-201ENST00000543233 ADGRB2O60241 1585 aa13.64□□□□□ -0.23
CDH4-201ENST00000543233 RBM27Q9P2N5 1060 aaKnown RBP13.64□□□□□ -0.23
CDH4-201ENST00000543233 MAP2P11137 1827 aaKnown RBP13.63□□□□□ -0.23
CDH4-201ENST00000543233 VIRMAQ69YN4 1812 aaKnown RBP13.63□□□□□ -0.23
CDH4-201ENST00000543233 IFT57Q9NWB7 429 aa13.63□□□□□ -0.23
CDH4-201ENST00000543233 NLRP6P59044 892 aa13.62□□□□□ -0.23
CDH4-201ENST00000543233 CFAP44Q96MT7 982 aa13.62□□□□□ -0.23
CDH4-201ENST00000543233 FEZ2Q9UHY8 353 aaPredicted RBP13.62□□□□□ -0.23
CDH4-201ENST00000543233 MED14O60244 1454 aa13.62□□□□□ -0.23
CDH4-201ENST00000543233 ALDH1L2Q3SY69 923 aa13.62□□□□□ -0.23
CDH4-201ENST00000543233 RIOK3O14730 519 aaKnown RBP13.62□□□□□ -0.23
CDH4-201ENST00000543233 TNNT1P13805 278 aa13.62□□□□□ -0.23
CDH4-201ENST00000543233 GTF2F1P35269 517 aaKnown RBP eCLIP13.62□□□□□ -0.23
CDH4-201ENST00000543233 SLC4A10Q6U841 1118 aa13.61□□□□□ -0.23
CDH4-201ENST00000543233 ZNF445P59923 1031 aa13.61□□□□□ -0.23
CDH4-201ENST00000543233 HDAC1Q13547 482 aaPredicted RBP13.61□□□□□ -0.23
CDH4-201ENST00000543233 TERF2Q15554 542 aa13.61□□□□□ -0.23
CDH4-201ENST00000543233 YY1AP1Q9H869 796 aa13.61□□□□□ -0.23
CDH4-201ENST00000543233 SYCE3A1L190 88 aa13.6□□□□□ -0.23
CDH4-201ENST00000543233 HSP90B1P14625 803 aaKnown RBP13.6□□□□□ -0.23
CDH4-201ENST00000543233 TTC12Q9H892 705 aaPredicted RBP13.6□□□□□ -0.23
CDH4-201ENST00000543233 DIAPH3Q9NSV4 1193 aa13.6□□□□□ -0.23
CDH4-201ENST00000543233 CIZ1Q9ULV3 898 aaPredicted RBP13.6□□□□□ -0.23
CDH4-201ENST00000543233 MAP3K19Q56UN5 1328 aa13.6□□□□□ -0.23
CDH4-201ENST00000543233 ZBTB7BO15156 539 aaPredicted RBP13.6□□□□□ -0.23
CDH4-201ENST00000543233 TULP2O00295 520 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 PLCB2Q00722 1185 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 ADAMTS13Q76LX8 1427 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 BAG4O95429 457 aaKnown RBP13.59□□□□□ -0.23
CDH4-201ENST00000543233 KCNA6P17658 529 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 CHD1LQ86WJ1 897 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 SMC5Q8IY18 1101 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 USHBP1Q8N6Y0 703 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 EFCC1Q9HA90 598 aa13.59□□□□□ -0.23
CDH4-201ENST00000543233 DLC1Q96QB1 1528 aa13.58□□□□□ -0.23
CDH4-201ENST00000543233 LMOD2Q6P5Q4 547 aa13.58□□□□□ -0.24
CDH4-201ENST00000543233 RTF1Q92541 710 aaKnown RBP13.58□□□□□ -0.24
CDH4-201ENST00000543233 NRXN3Q9Y4C0 1643 aa13.58□□□□□ -0.24
CDH4-201ENST00000543233 PIBF1Q8WXW3 757 aa13.58□□□□□ -0.24
CDH4-201ENST00000543233 KIF20BQ96Q89 1820 aa13.58□□□□□ -0.24
CDH4-201ENST00000543233 F6X3S4 739 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 ZNF853P0CG23 659 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 MTHFSDQ2M296 383 aaKnown RBP13.57□□□□□ -0.24
CDH4-201ENST00000543233 MYCBPQ99417 103 aaPredicted RBP13.57□□□□□ -0.24
CDH4-201ENST00000543233 PTPRUQ92729 1446 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 IBTKQ9P2D0 1353 aaPredicted RBP13.57□□□□□ -0.24
CDH4-201ENST00000543233 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 SIRT2Q8IXJ6 389 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 ABTB2Q8N961 1025 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 TSPYL4Q9UJ04 414 aa13.57□□□□□ -0.24
CDH4-201ENST00000543233 RAD51AP2Q09MP3 1159 aa13.56□□□□□ -0.24
CDH4-201ENST00000543233 AATKQ6ZMQ8 1374 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms