RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-223ENST00000542838 PDCL3Q9H2J4 239 aa15.74■□□□□ 0.11
DDX11-223ENST00000542838 PALD1Q9ULE6 856 aa15.74■□□□□ 0.11
DDX11-223ENST00000542838 PPP6R1Q9UPN7 881 aa15.74■□□□□ 0.11
DDX11-223ENST00000542838 TRIM6-TRIM34B2RNG4 842 aa15.73■□□□□ 0.11
DDX11-223ENST00000542838 SOX12O15370 315 aa15.73■□□□□ 0.11
DDX11-223ENST00000542838 FOXO3O43524 673 aa15.73■□□□□ 0.11
DDX11-223ENST00000542838 CUL4AQ13619 759 aa15.73■□□□□ 0.11
DDX11-223ENST00000542838 ANO2Q9NQ90 1003 aa15.73■□□□□ 0.11
DDX11-223ENST00000542838 ZKSCAN5Q9Y2L8 839 aa15.73■□□□□ 0.11
DDX11-223ENST00000542838 MX1P20591 662 aa15.73■□□□□ 0.11
DDX11-223ENST00000542838 RNF214Q8ND24 703 aa15.73■□□□□ 0.11
DDX11-223ENST00000542838 SALL3Q9BXA9 1300 aa15.72■□□□□ 0.11
DDX11-223ENST00000542838 SIRT1Q96EB6 747 aa15.72■□□□□ 0.11
DDX11-223ENST00000542838 CHMLP26374 656 aa15.71■□□□□ 0.11
DDX11-223ENST00000542838 STK31Q9BXU1 1019 aa15.71■□□□□ 0.11
DDX11-223ENST00000542838 CCDC39Q9UFE4 941 aa15.71■□□□□ 0.11
DDX11-223ENST00000542838 PEAK1Q9H792 1746 aa15.71■□□□□ 0.11
DDX11-223ENST00000542838 ACEP12821 1306 aa15.71■□□□□ 0.11
DDX11-223ENST00000542838 NUTM2FA1L443 756 aa15.71■□□□□ 0.11
DDX11-223ENST00000542838 MTHFSDQ2M296 383 aaKnown RBP15.71■□□□□ 0.11
DDX11-223ENST00000542838 OVOS2A0A0J9YW53 1432 aa15.71■□□□□ 0.11
DDX11-223ENST00000542838 OVOS2Q6IE36 1432 aa15.71■□□□□ 0.11
DDX11-223ENST00000542838 ANAPC15P60006 121 aa15.71■□□□□ 0.1
DDX11-223ENST00000542838 INTS4Q96HW7 963 aaKnown RBP15.71■□□□□ 0.1
DDX11-223ENST00000542838 RGPD1P0DJD0 1748 aa15.7■□□□□ 0.1
DDX11-223ENST00000542838 TUBGCP6Q96RT7 1819 aa15.7■□□□□ 0.1
DDX11-223ENST00000542838 PNMA6EA0A0J9YXQ4 647 aa15.7■□□□□ 0.1
DDX11-223ENST00000542838 GNAI3P08754 354 aa15.7■□□□□ 0.1
DDX11-223ENST00000542838 RBM10P98175 930 aaKnown RBP15.7■□□□□ 0.1
DDX11-223ENST00000542838 TECPR2O15040 1411 aa15.7■□□□□ 0.1
DDX11-223ENST00000542838 MAP3K19Q56UN5 1328 aa15.7■□□□□ 0.1
DDX11-223ENST00000542838 MCM5P33992 734 aa15.69■□□□□ 0.1
DDX11-223ENST00000542838 TSPY26PQ9H489 355 aa15.69■□□□□ 0.1
DDX11-223ENST00000542838 ATP8B2P98198 1209 aa15.69■□□□□ 0.1
DDX11-223ENST00000542838 FKBP5Q13451 457 aaPredicted RBP15.69■□□□□ 0.1
DDX11-223ENST00000542838 FOXD4L6Q3SYB3 417 aaPredicted RBP15.69■□□□□ 0.1
DDX11-223ENST00000542838 FOXD4L3Q6VB84 417 aaPredicted RBP15.69■□□□□ 0.1
DDX11-223ENST00000542838 SYAP1Q96A49 352 aaPredicted RBP15.69■□□□□ 0.1
DDX11-223ENST00000542838 ZMYND15Q9H091 742 aa15.69■□□□□ 0.1
DDX11-223ENST00000542838 CSPP1Q1MSJ5 1256 aa15.69■□□□□ 0.1
DDX11-223ENST00000542838 UPF3BQ9BZI7 483 aaKnown RBP15.69■□□□□ 0.1
DDX11-223ENST00000542838 RIMS1Q86UR5 1692 aaKnown RBP15.68■□□□□ 0.1
DDX11-223ENST00000542838 AGLP35573 1532 aa15.68■□□□□ 0.1
DDX11-223ENST00000542838 FLIIQ13045 1269 aa15.68■□□□□ 0.1
DDX11-223ENST00000542838 ARHGEF10O15013 1369 aa15.68■□□□□ 0.1
DDX11-223ENST00000542838 SSH2Q76I76 1423 aa15.67■□□□□ 0.1
DDX11-223ENST00000542838 NECTIN2Q92692 538 aa15.67■□□□□ 0.1
DDX11-223ENST00000542838 HDGFP51858 240 aaKnown RBP15.67■□□□□ 0.1
DDX11-223ENST00000542838 UNC5CLQ8IV45 518 aa15.67■□□□□ 0.1
DDX11-223ENST00000542838 SRCIN1Q9C0H9 1055 aa15.67■□□□□ 0.1
DDX11-223ENST00000542838 GDPD2Q9HCC8 539 aa15.67■□□□□ 0.1
DDX11-223ENST00000542838 UQCRHLA0A096LP55 91 aa15.66■□□□□ 0.1
DDX11-223ENST00000542838 PTMAP06454 111 aaKnown RBP15.66■□□□□ 0.1
DDX11-223ENST00000542838 UQCRHP07919 91 aa15.66■□□□□ 0.1
DDX11-223ENST00000542838 STAP2Q9UGK3 403 aa15.66■□□□□ 0.1
DDX11-223ENST00000542838 CCDC30Q5VVM6 783 aa15.66■□□□□ 0.1
DDX11-223ENST00000542838 FAM13BQ9NYF5 915 aa15.66■□□□□ 0.1
DDX11-223ENST00000542838 LRRFIP2Q9Y608 721 aaKnown RBP15.66■□□□□ 0.1
DDX11-223ENST00000542838 NALCNQ8IZF0 1738 aa15.66■□□□□ 0.1
DDX11-223ENST00000542838 ROBO2Q9HCK4 1378 aa15.66■□□□□ 0.1
DDX11-223ENST00000542838 USP6P35125 1406 aa15.66■□□□□ 0.1
DDX11-223ENST00000542838 GADD45BO75293 160 aaPredicted RBP15.66■□□□□ 0.1
DDX11-223ENST00000542838 PLEKHG3A1L390 1219 aa15.65■□□□□ 0.1
DDX11-223ENST00000542838 USP31Q70CQ4 1352 aa15.65■□□□□ 0.1
DDX11-223ENST00000542838 USP48Q86UV5 1035 aa15.65■□□□□ 0.1
DDX11-223ENST00000542838 WDR33Q9C0J8 1336 aaKnown RBP15.64■□□□□ 0.09
DDX11-223ENST00000542838 PHF14O94880 888 aa15.64■□□□□ 0.09
DDX11-223ENST00000542838 PKNOX2Q96KN3 472 aa15.64■□□□□ 0.09
DDX11-223ENST00000542838 IL1RAPL2Q9NP60 686 aa15.64■□□□□ 0.09
DDX11-223ENST00000542838 TCHHQ07283 1943 aa15.64■□□□□ 0.09
DDX11-223ENST00000542838 FAM69CQ0P6D2 419 aa15.64■□□□□ 0.09
DDX11-223ENST00000542838 IL17RAQ96F46 866 aa15.64■□□□□ 0.09
DDX11-223ENST00000542838 XRN1Q8IZH2 1706 aaKnown RBP15.63■□□□□ 0.09
DDX11-223ENST00000542838 FMN2Q9NZ56 1722 aa15.63■□□□□ 0.09
DDX11-223ENST00000542838 IL25Q9H293 177 aa15.63■□□□□ 0.09
DDX11-223ENST00000542838 TOPAZ1Q8N9V7 1692 aa15.63■□□□□ 0.09
DDX11-223ENST00000542838 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.63■□□□□ 0.09
DDX11-223ENST00000542838 HSPA4P34932 840 aa15.62■□□□□ 0.09
DDX11-223ENST00000542838 NUTM1Q86Y26 1132 aa15.62■□□□□ 0.09
DDX11-223ENST00000542838 EYA1Q99502 592 aa15.62■□□□□ 0.09
DDX11-223ENST00000542838 ESF1Q9H501 851 aaKnown RBP15.62■□□□□ 0.09
DDX11-223ENST00000542838 FAM208AQ9UK61 1670 aaKnown RBP15.62■□□□□ 0.09
DDX11-223ENST00000542838 TSPOAP1O95153 1857 aa15.62■□□□□ 0.09
DDX11-223ENST00000542838 AOX1Q06278 1338 aa15.62■□□□□ 0.09
DDX11-223ENST00000542838 MAP4K4O95819 1239 aaPredicted RBP15.62■□□□□ 0.09
DDX11-223ENST00000542838 FLT4P35916 1363 aa15.62■□□□□ 0.09
DDX11-223ENST00000542838 UBTFL1P0CB47 393 aaPredicted RBP15.62■□□□□ 0.09
DDX11-223ENST00000542838 AMPHP49418 695 aa15.62■□□□□ 0.09
DDX11-223ENST00000542838 SASS6Q6UVJ0 657 aa15.61■□□□□ 0.09
DDX11-223ENST00000542838 MAP7D2Q96T17 732 aa15.61■□□□□ 0.09
DDX11-223ENST00000542838 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.61■□□□□ 0.09
DDX11-223ENST00000542838 SBNO1A3KN83 1393 aa15.61■□□□□ 0.09
DDX11-223ENST00000542838 KDRP35968 1356 aa15.61■□□□□ 0.09
DDX11-223ENST00000542838 EPB41L2O43491 1005 aaKnown RBP15.61■□□□□ 0.09
DDX11-223ENST00000542838 USP44Q9H0E7 712 aa15.61■□□□□ 0.09
DDX11-223ENST00000542838 KIAA2012Q0VF49 1180 aa15.6■□□□□ 0.09
DDX11-223ENST00000542838 CEP170BQ9Y4F5 1589 aaPredicted RBP15.6■□□□□ 0.09
DDX11-223ENST00000542838 TPRNQ4KMQ1 711 aa15.6■□□□□ 0.09
DDX11-223ENST00000542838 SOS1Q07889 1333 aaPredicted RBP15.6■□□□□ 0.09
DDX11-223ENST00000542838 IGSF1Q8N6C5 1336 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms