RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 MCTP1Q6DN14 999 aa12.34□□□□□ -0.43
TOP3A-208ENST00000542570 LARP1Q6PKG0 1096 aaKnown RBP12.34□□□□□ -0.43
TOP3A-208ENST00000542570 TRIM44Q96DX7 344 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-208ENST00000542570 SEC24BO95487 1268 aa12.33□□□□□ -0.44
TOP3A-208ENST00000542570 ZKSCAN1P17029 563 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-208ENST00000542570 ZRSR1Q15695 479 aaKnown RBP12.33□□□□□ -0.44
TOP3A-208ENST00000542570 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-208ENST00000542570 OTUD7AQ8TE49 926 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-208ENST00000542570 RNMTO43148 476 aaKnown RBP12.33□□□□□ -0.44
TOP3A-208ENST00000542570 DTNBO60941 627 aa12.33□□□□□ -0.44
TOP3A-208ENST00000542570 CCDC24Q8N4L8 307 aa12.33□□□□□ -0.44
TOP3A-208ENST00000542570 TRMT112Q9UI30 125 aaKnown RBP12.33□□□□□ -0.44
TOP3A-208ENST00000542570 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-208ENST00000542570 SNRPA1P09661 255 aaKnown RBP12.32□□□□□ -0.44
TOP3A-208ENST00000542570 IL2RBP14784 551 aa12.32□□□□□ -0.44
TOP3A-208ENST00000542570 RUFY2Q8WXA3 655 aa12.32□□□□□ -0.44
TOP3A-208ENST00000542570 MPHOSPH8Q99549 860 aa12.32□□□□□ -0.44
TOP3A-208ENST00000542570 VPS37CA5D8V6 355 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-208ENST00000542570 STK3Q13188 491 aa12.32□□□□□ -0.44
TOP3A-208ENST00000542570 AXIN2Q9Y2T1 843 aa12.32□□□□□ -0.44
TOP3A-208ENST00000542570 CNTROBQ8N137 903 aa12.32□□□□□ -0.44
TOP3A-208ENST00000542570 ZNF496Q96IT1 587 aaPredicted RBP12.32□□□□□ -0.44
TOP3A-208ENST00000542570 PLEKHF1Q96S99 279 aa12.32□□□□□ -0.44
TOP3A-208ENST00000542570 DDB1Q16531 1140 aa12.31□□□□□ -0.44
TOP3A-208ENST00000542570 GBP4Q96PP9 640 aa12.31□□□□□ -0.44
TOP3A-208ENST00000542570 CEP126Q9P2H0 1117 aa12.31□□□□□ -0.44
TOP3A-208ENST00000542570 IL16Q14005 1332 aa12.31□□□□□ -0.44
TOP3A-208ENST00000542570 IQSEC3Q9UPP2 1182 aaPredicted RBP12.31□□□□□ -0.44
TOP3A-208ENST00000542570 ABCA9Q8IUA7 1624 aa12.31□□□□□ -0.44
TOP3A-208ENST00000542570 CHL1O00533 1208 aa12.31□□□□□ -0.44
TOP3A-208ENST00000542570 PLEKHG1Q9ULL1 1385 aa12.31□□□□□ -0.44
TOP3A-208ENST00000542570 MX1P20591 662 aa12.3□□□□□ -0.44
TOP3A-208ENST00000542570 AAMPQ13685 434 aa12.3□□□□□ -0.44
TOP3A-208ENST00000542570 FAM98CQ17RN3 349 aaKnown RBP12.3□□□□□ -0.44
TOP3A-208ENST00000542570 RRP12Q5JTH9 1297 aaKnown RBP12.3□□□□□ -0.44
TOP3A-208ENST00000542570 NPC1L1Q9UHC9 1359 aa12.3□□□□□ -0.44
TOP3A-208ENST00000542570 USP16Q9Y5T5 823 aa12.3□□□□□ -0.44
TOP3A-208ENST00000542570 ABCF2Q9UG63 623 aa12.3□□□□□ -0.44
TOP3A-208ENST00000542570 SBNO2Q9Y2G9 1366 aa12.3□□□□□ -0.44
TOP3A-208ENST00000542570 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
TOP3A-208ENST00000542570 NFKBIBQ15653 356 aa12.3□□□□□ -0.44
TOP3A-208ENST00000542570 ZBTB40Q9NUA8 1239 aa12.3□□□□□ -0.44
TOP3A-208ENST00000542570 HYPKQ9NX55 129 aa12.3□□□□□ -0.44
TOP3A-208ENST00000542570 DDX49Q9Y6V7 483 aaKnown RBP12.3□□□□□ -0.44
TOP3A-208ENST00000542570 PRIM1P49642 420 aaKnown RBP12.29□□□□□ -0.44
TOP3A-208ENST00000542570 RNF17Q9BXT8 1623 aaKnown RBP12.29□□□□□ -0.44
TOP3A-208ENST00000542570 PLXNC1O60486 1568 aa12.29□□□□□ -0.44
TOP3A-208ENST00000542570 IDH1O75874 414 aaKnown RBP12.29□□□□□ -0.44
TOP3A-208ENST00000542570 ZNF790Q6PG37 636 aa12.29□□□□□ -0.44
TOP3A-208ENST00000542570 HELBQ8NG08 1087 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-208ENST00000542570 IQGAP3Q86VI3 1631 aa12.29□□□□□ -0.44
TOP3A-208ENST00000542570 NBPF7P0C2Y1 421 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-208ENST00000542570 ATP6V1AP38606 617 aa12.29□□□□□ -0.44
TOP3A-208ENST00000542570 LMBR1LQ6UX01 489 aa12.29□□□□□ -0.44
TOP3A-208ENST00000542570 SHROOM2Q13796 1616 aa12.29□□□□□ -0.44
TOP3A-208ENST00000542570 MAP3K5Q99683 1374 aa12.28□□□□□ -0.44
TOP3A-208ENST00000542570 E9PCH4 1651 aa12.28□□□□□ -0.44
TOP3A-208ENST00000542570 METTL24Q5JXM2 366 aa12.28□□□□□ -0.44
TOP3A-208ENST00000542570 TTC39AQ5SRH9 613 aa12.28□□□□□ -0.44
TOP3A-208ENST00000542570 KIAA0232Q92628 1395 aa12.28□□□□□ -0.44
TOP3A-208ENST00000542570 USP19O94966 1318 aa12.28□□□□□ -0.44
TOP3A-208ENST00000542570 ZBTB7BO15156 539 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-208ENST00000542570 FAM184AQ8NB25 1140 aa12.28□□□□□ -0.44
TOP3A-208ENST00000542570 CEP152O94986 1710 aa12.28□□□□□ -0.44
TOP3A-208ENST00000542570 KIF1BPQ96EK5 621 aa12.27□□□□□ -0.44
TOP3A-208ENST00000542570 NDUFB9Q9Y6M9 179 aa12.27□□□□□ -0.45
TOP3A-208ENST00000542570 NLRP1Q9C000 1473 aa12.27□□□□□ -0.45
TOP3A-208ENST00000542570 NPHP4O75161 1426 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-208ENST00000542570 H3BQV1 296 aa12.27□□□□□ -0.45
TOP3A-208ENST00000542570 CHAF1AQ13111 956 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-208ENST00000542570 IFFO2Q5TF58 517 aa12.27□□□□□ -0.45
TOP3A-208ENST00000542570 FAM89AQ96GI7 184 aa12.27□□□□□ -0.45
TOP3A-208ENST00000542570 TET3O43151 1660 aa12.27□□□□□ -0.45
TOP3A-208ENST00000542570 MYOM2P54296 1465 aa12.27□□□□□ -0.45
TOP3A-208ENST00000542570 PTPRCP08575 1304 aa12.27□□□□□ -0.45
TOP3A-208ENST00000542570 PROSER3Q2NL68 480 aa12.26□□□□□ -0.45
TOP3A-208ENST00000542570 SLC4A8Q2Y0W8 1093 aa12.26□□□□□ -0.45
TOP3A-208ENST00000542570 TBC1D9Q6ZT07 1266 aa12.26□□□□□ -0.45
TOP3A-208ENST00000542570 ARHGEF25Q86VW2 580 aa12.26□□□□□ -0.45
TOP3A-208ENST00000542570 SIRT1Q96EB6 747 aa12.26□□□□□ -0.45
TOP3A-208ENST00000542570 TCEANC2Q96MN5 208 aa12.26□□□□□ -0.45
TOP3A-208ENST00000542570 KIF1BO60333 1816 aa12.26□□□□□ -0.45
TOP3A-208ENST00000542570 CFAP74Q9C0B2 1584 aa12.26□□□□□ -0.45
TOP3A-208ENST00000542570 CCDC158Q5M9N0 1113 aa12.26□□□□□ -0.45
TOP3A-208ENST00000542570 LDHAL6AQ6ZMR3 332 aa12.26□□□□□ -0.45
TOP3A-208ENST00000542570 DNAJC10Q8IXB1 793 aa12.26□□□□□ -0.45
TOP3A-208ENST00000542570 PNMA6EA0A0J9YXQ4 647 aa12.25□□□□□ -0.45
TOP3A-208ENST00000542570 ATP2B1P20020 1258 aa12.25□□□□□ -0.45
TOP3A-208ENST00000542570 CEP85Q6P2H3 762 aa12.25□□□□□ -0.45
TOP3A-208ENST00000542570 KSR2Q6VAB6 950 aa12.25□□□□□ -0.45
TOP3A-208ENST00000542570 NFXL1Q6ZNB6 911 aa12.25□□□□□ -0.45
TOP3A-208ENST00000542570 DCAF5Q96JK2 942 aa12.25□□□□□ -0.45
TOP3A-208ENST00000542570 ARHGAP31Q2M1Z3 1444 aa12.25□□□□□ -0.45
TOP3A-208ENST00000542570 DDX46Q7L014 1031 aaKnown RBP12.25□□□□□ -0.45
TOP3A-208ENST00000542570 RHPN1Q8TCX5 695 aa12.25□□□□□ -0.45
TOP3A-208ENST00000542570 GRM8O00222 908 aa12.24□□□□□ -0.45
TOP3A-208ENST00000542570 ZFYVE9O95405 1425 aa12.24□□□□□ -0.45
TOP3A-208ENST00000542570 CEBPZQ03701 1054 aaKnown RBP12.24□□□□□ -0.45
TOP3A-208ENST00000542570 IFIT5Q13325 482 aaKnown RBP12.24□□□□□ -0.45
TOP3A-208ENST00000542570 USP6P35125 1406 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms