RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
CLPB-211ENST00000542555 MORN1Q5T089 497 aa12.19□□□□□ -0.46
CLPB-211ENST00000542555 GMPR2Q9P2T1 348 aaKnown RBP12.19□□□□□ -0.46
CLPB-211ENST00000542555 MST1RQ04912 1400 aa12.19□□□□□ -0.46
CLPB-211ENST00000542555 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
CLPB-211ENST00000542555 SEMA3EO15041 775 aa12.18□□□□□ -0.46
CLPB-211ENST00000542555 FUT2Q10981 343 aa12.18□□□□□ -0.46
CLPB-211ENST00000542555 SF3B2Q13435 895 aaKnown RBP12.18□□□□□ -0.46
CLPB-211ENST00000542555 LCE2AQ5TA79 106 aaPredicted RBP12.18□□□□□ -0.46
CLPB-211ENST00000542555 DAXXQ9UER7 740 aaPredicted RBP12.18□□□□□ -0.46
CLPB-211ENST00000542555 LOC105371045A0A1W2PR82 267 aa12.17□□□□□ -0.46
CLPB-211ENST00000542555 DDX17Q92841 729 aaKnown RBP12.17□□□□□ -0.46
CLPB-211ENST00000542555 NHSL1Q5SYE7 1610 aa12.17□□□□□ -0.46
CLPB-211ENST00000542555 PTCH1Q13635 1447 aa12.16□□□□□ -0.46
CLPB-211ENST00000542555 PTPRUQ92729 1446 aa12.16□□□□□ -0.46
CLPB-211ENST00000542555 ADGRL3Q9HAR2 1447 aa12.15□□□□□ -0.46
CLPB-211ENST00000542555 THAP11Q96EK4 314 aa12.15□□□□□ -0.46
CLPB-211ENST00000542555 RTN4Q9NQC3 1192 aaKnown RBP12.15□□□□□ -0.46
CLPB-211ENST00000542555 FNBP4Q8N3X1 1017 aaPredicted RBP12.14□□□□□ -0.47
CLPB-211ENST00000542555 SLC27A5Q9Y2P5 690 aa12.14□□□□□ -0.47
CLPB-211ENST00000542555 NUP155O75694 1391 aa12.14□□□□□ -0.47
CLPB-211ENST00000542555 UNC13BO14795 1591 aa12.13□□□□□ -0.47
CLPB-211ENST00000542555 SMCPP49901 116 aaPredicted RBP12.13□□□□□ -0.47
CLPB-211ENST00000542555 SULF1Q8IWU6 871 aa12.13□□□□□ -0.47
CLPB-211ENST00000542555 FAM160A2Q8N612 972 aaPredicted RBP12.13□□□□□ -0.47
CLPB-211ENST00000542555 SOS2Q07890 1332 aaPredicted RBP12.11□□□□□ -0.47
CLPB-211ENST00000542555 C1orf167Q5SNV9 1468 aa12.11□□□□□ -0.47
CLPB-211ENST00000542555 METP08581 1390 aa12.11□□□□□ -0.47
CLPB-211ENST00000542555 GNPATO15228 680 aa12.11□□□□□ -0.47
CLPB-211ENST00000542555 SMYD5Q6GMV2 418 aa12.11□□□□□ -0.47
CLPB-211ENST00000542555 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
CLPB-211ENST00000542555 ORAI2Q96SN7 254 aa12.11□□□□□ -0.47
CLPB-211ENST00000542555 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
CLPB-211ENST00000542555 XRN1Q8IZH2 1706 aaKnown RBP12.11□□□□□ -0.47
CLPB-211ENST00000542555 ATRNO75882 1429 aa12.11□□□□□ -0.47
CLPB-211ENST00000542555 NPHP3Q7Z494 1330 aa12.11□□□□□ -0.47
CLPB-211ENST00000542555 E9PCH4 1651 aa12.1□□□□□ -0.47
CLPB-211ENST00000542555 SETBP1Q9Y6X0 1596 aa12.1□□□□□ -0.47
CLPB-211ENST00000542555 INSM1Q01101 510 aaPredicted RBP12.1□□□□□ -0.47
CLPB-211ENST00000542555 GRIPAP1Q4V328 841 aa12.1□□□□□ -0.47
CLPB-211ENST00000542555 PRDM9Q9NQV7 894 aa12.1□□□□□ -0.47
CLPB-211ENST00000542555 LRPPRCP42704 1394 aaKnown RBP12.09□□□□□ -0.47
CLPB-211ENST00000542555 FECHP22830 423 aa12.09□□□□□ -0.47
CLPB-211ENST00000542555 GCGRP47871 477 aa12.09□□□□□ -0.47
CLPB-211ENST00000542555 HAP1P54257 671 aaPredicted RBP12.09□□□□□ -0.47
CLPB-211ENST00000542555 ESCO1Q5FWF5 840 aa12.09□□□□□ -0.47
CLPB-211ENST00000542555 STK17AQ9UEE5 414 aa12.09□□□□□ -0.47
CLPB-211ENST00000542555 RBM26Q5T8P6 1007 aaKnown RBP12.08□□□□□ -0.48
CLPB-211ENST00000542555 BLMP54132 1417 aaPredicted RBP12.08□□□□□ -0.48
CLPB-211ENST00000542555 IQGAP3Q86VI3 1631 aa12.08□□□□□ -0.48
CLPB-211ENST00000542555 ROCK1Q13464 1354 aa12.07□□□□□ -0.48
CLPB-211ENST00000542555 BRICD5Q6PL45 260 aa12.07□□□□□ -0.48
CLPB-211ENST00000542555 SNIP1Q8TAD8 396 aaKnown RBP12.07□□□□□ -0.48
CLPB-211ENST00000542555 WNT7AO00755 349 aa12.06□□□□□ -0.48
CLPB-211ENST00000542555 ITGAEP38570 1179 aa12.06□□□□□ -0.48
CLPB-211ENST00000542555 NFX1Q12986 1120 aaKnown RBP12.06□□□□□ -0.48
CLPB-211ENST00000542555 NLRP7Q8WX94 980 aa12.06□□□□□ -0.48
CLPB-211ENST00000542555 CCDC9Q9Y3X0 531 aaKnown RBP12.06□□□□□ -0.48
CLPB-211ENST00000542555 MSS51Q4VC12 460 aa12.05□□□□□ -0.48
CLPB-211ENST00000542555 UNC5CLQ8IV45 518 aa12.05□□□□□ -0.48
CLPB-211ENST00000542555 NALCNQ8IZF0 1738 aa12.05□□□□□ -0.48
CLPB-211ENST00000542555 NRXN3Q9Y4C0 1643 aa12.04□□□□□ -0.48
CLPB-211ENST00000542555 FOXO3O43524 673 aa12.04□□□□□ -0.48
CLPB-211ENST00000542555 BAG6P46379 1132 aa12.04□□□□□ -0.48
CLPB-211ENST00000542555 SENP2Q9HC62 589 aa12.04□□□□□ -0.48
CLPB-211ENST00000542555 ATP13A2Q9NQ11 1180 aa12.04□□□□□ -0.48
CLPB-211ENST00000542555 HFM1A2PYH4 1435 aa12.03□□□□□ -0.48
CLPB-211ENST00000542555 WIPF1O43516 503 aa12.03□□□□□ -0.48
CLPB-211ENST00000542555 TRIM32Q13049 653 aa12.03□□□□□ -0.48
CLPB-211ENST00000542555 Q3C1V9 767 aa12.03□□□□□ -0.48
CLPB-211ENST00000542555 RNF19BQ6ZMZ0 732 aa12.03□□□□□ -0.48
CLPB-211ENST00000542555 LAMC1P11047 1609 aa12.03□□□□□ -0.48
CLPB-211ENST00000542555 BCL9LQ86UU0 1499 aa12.02□□□□□ -0.48
CLPB-211ENST00000542555 COL22A1Q8NFW1 1626 aaPredicted RBP12.02□□□□□ -0.49
CLPB-211ENST00000542555 SMPD1P17405 629 aa12.02□□□□□ -0.49
CLPB-211ENST00000542555 DEFB132Q7Z7B7 95 aa12.02□□□□□ -0.49
CLPB-211ENST00000542555 SPHKAPQ2M3C7 1700 aa12.01□□□□□ -0.49
CLPB-211ENST00000542555 XPCQ01831 940 aaPredicted RBP12.01□□□□□ -0.49
CLPB-211ENST00000542555 SEPT12Q8IYM1 358 aa12.01□□□□□ -0.49
CLPB-211ENST00000542555 MRGPRX2Q96LB1 330 aa12.01□□□□□ -0.49
CLPB-211ENST00000542555 ROBO2Q9HCK4 1378 aa12.01□□□□□ -0.49
CLPB-211ENST00000542555 MYOM2P54296 1465 aa12.01□□□□□ -0.49
CLPB-211ENST00000542555 PSME1Q06323 249 aa12□□□□□ -0.49
CLPB-211ENST00000542555 KRT27Q7Z3Y8 459 aa12□□□□□ -0.49
CLPB-211ENST00000542555 REPIN1Q9BWE0 567 aaKnown RBP12□□□□□ -0.49
CLPB-211ENST00000542555 RPGRIP1LQ68CZ1 1315 aa12□□□□□ -0.49
CLPB-211ENST00000542555 TESPA1A2RU30 521 aaPredicted RBP11.99□□□□□ -0.49
CLPB-211ENST00000542555 SNRPBP14678 240 aaKnown RBP11.99□□□□□ -0.49
CLPB-211ENST00000542555 RALGAPBQ86X10 1494 aa11.99□□□□□ -0.49
CLPB-211ENST00000542555 NEXMIFQ5QGS0 1516 aa11.99□□□□□ -0.49
CLPB-211ENST00000542555 J3QL48 77 aa11.98□□□□□ -0.49
CLPB-211ENST00000542555 TERTO14746 1132 aaKnown RBP11.98□□□□□ -0.49
CLPB-211ENST00000542555 TRIM47Q96LD4 638 aa11.98□□□□□ -0.49
CLPB-211ENST00000542555 VPS72Q15906 364 aa11.97□□□□□ -0.49
CLPB-211ENST00000542555 KIFC2Q96AC6 838 aa11.97□□□□□ -0.49
CLPB-211ENST00000542555 KIF1BO60333 1816 aa11.97□□□□□ -0.49
CLPB-211ENST00000542555 MARF1Q9Y4F3 1742 aaKnown RBP11.97□□□□□ -0.49
CLPB-211ENST00000542555 SPATA31A3Q5VYP0 1347 aa11.96□□□□□ -0.49
CLPB-211ENST00000542555 KRT28Q7Z3Y7 464 aa11.96□□□□□ -0.49
CLPB-211ENST00000542555 STK26Q9P289 416 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms