RNA–Protein interactions for RNA: ENST00000541819.6

GABRB3-204, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 5,934 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-204ENST00000541819 DZIP1Q86YF9 867 aaKnown RBP12.5□□□□□ -0.41
GABRB3-204ENST00000541819 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
GABRB3-204ENST00000541819 TOP2AP11388 1531 aaKnown RBP12.5□□□□□ -0.41
GABRB3-204ENST00000541819 SLF2Q8IX21 1173 aa12.5□□□□□ -0.41
GABRB3-204ENST00000541819 ZSCAN12O43309 604 aa12.5□□□□□ -0.41
GABRB3-204ENST00000541819 IFIT1P09914 478 aaKnown RBP12.5□□□□□ -0.41
GABRB3-204ENST00000541819 FERP16591 822 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 TSR2Q969E8 191 aaKnown RBP12.49□□□□□ -0.41
GABRB3-204ENST00000541819 ANKIB1Q9P2G1 1089 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 MROH2BQ7Z745 1585 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 TMCO3Q6UWJ1 677 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 FILIP1Q7Z7B0 1213 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 FERMT1Q9BQL6 677 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 SSX2IPQ9Y2D8 614 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 CCDC196A0A1B0GTZ2 297 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 TSNARE1Q96NA8 513 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 CASQ1P31415 396 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 KIF5CO60282 957 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 UBE4AQ14139 1066 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 UBXN4Q92575 508 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 TAOK3Q9H2K8 898 aa12.49□□□□□ -0.41
GABRB3-204ENST00000541819 BAG4O95429 457 aaKnown RBP12.48□□□□□ -0.41
GABRB3-204ENST00000541819 MAP3K11Q16584 847 aa12.48□□□□□ -0.41
GABRB3-204ENST00000541819 CTCFLQ8NI51 663 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-204ENST00000541819 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-204ENST00000541819 MACROD2A1Z1Q3 448 aa12.48□□□□□ -0.41
GABRB3-204ENST00000541819 CETN1Q12798 172 aa12.48□□□□□ -0.41
GABRB3-204ENST00000541819 ZNF444Q8N0Y2 327 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-204ENST00000541819 UQCRHLA0A096LP55 91 aa12.48□□□□□ -0.41
GABRB3-204ENST00000541819 MINDY4BA8MYZ0 360 aa12.48□□□□□ -0.41
GABRB3-204ENST00000541819 KIF2AO00139 706 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-204ENST00000541819 UQCRHP07919 91 aa12.48□□□□□ -0.41
GABRB3-204ENST00000541819 BCAR3O75815 825 aa12.48□□□□□ -0.41
GABRB3-204ENST00000541819 LIG1P18858 919 aa12.48□□□□□ -0.41
GABRB3-204ENST00000541819 CHD1LQ86WJ1 897 aa12.48□□□□□ -0.41
GABRB3-204ENST00000541819 CCDC85AQ96PX6 553 aaPredicted RBP12.48□□□□□ -0.41
GABRB3-204ENST00000541819 RTEL1-TNFRSF6BF6WH68 1400 aa12.47□□□□□ -0.41
GABRB3-204ENST00000541819 USO1O60763 962 aaKnown RBP12.47□□□□□ -0.41
GABRB3-204ENST00000541819 CASTP20810 708 aaKnown RBP12.47□□□□□ -0.41
GABRB3-204ENST00000541819 DDX23Q9BUQ8 820 aaKnown RBP12.47□□□□□ -0.41
GABRB3-204ENST00000541819 ANKRD50Q9ULJ7 1429 aa12.47□□□□□ -0.41
GABRB3-204ENST00000541819 DDX11Q96FC9 970 aa12.47□□□□□ -0.41
GABRB3-204ENST00000541819 PSMD1Q99460 953 aa12.47□□□□□ -0.41
GABRB3-204ENST00000541819 MPHOSPH6Q99547 160 aaKnown RBP12.47□□□□□ -0.41
GABRB3-204ENST00000541819 ANKLE2Q86XL3 938 aa12.47□□□□□ -0.41
GABRB3-204ENST00000541819 FANCD2Q9BXW9 1451 aa12.47□□□□□ -0.41
GABRB3-204ENST00000541819 CFAP70Q5T0N1 1121 aa12.47□□□□□ -0.41
GABRB3-204ENST00000541819 RPGRQ92834 1020 aaKnown RBP12.46□□□□□ -0.41
GABRB3-204ENST00000541819 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.46□□□□□ -0.41
GABRB3-204ENST00000541819 NAPBQ9H115 298 aa12.46□□□□□ -0.41
GABRB3-204ENST00000541819 TMOD3Q9NYL9 352 aa12.46□□□□□ -0.41
GABRB3-204ENST00000541819 MPNDQ8N594 471 aa12.46□□□□□ -0.41
GABRB3-204ENST00000541819 GRPEL1Q9HAV7 217 aa12.46□□□□□ -0.41
GABRB3-204ENST00000541819 STXBP4Q6ZWJ1 553 aa12.46□□□□□ -0.42
GABRB3-204ENST00000541819 WDR63Q8IWG1 891 aa12.46□□□□□ -0.42
GABRB3-204ENST00000541819 LRRC45Q96CN5 670 aa12.46□□□□□ -0.42
GABRB3-204ENST00000541819 TTC21AQ8NDW8 1320 aa12.46□□□□□ -0.42
GABRB3-204ENST00000541819 SLC5A1P13866 664 aa12.46□□□□□ -0.42
GABRB3-204ENST00000541819 PAFAH1B1P43034 410 aa12.45□□□□□ -0.42
GABRB3-204ENST00000541819 SFPQP23246 707 aaKnown RBP eCLIP12.45□□□□□ -0.42
GABRB3-204ENST00000541819 MAP3K12Q12852 859 aa12.45□□□□□ -0.42
GABRB3-204ENST00000541819 MICALCLQ6ZW33 695 aa12.45□□□□□ -0.42
GABRB3-204ENST00000541819 CABP1Q9NZU7 370 aa12.45□□□□□ -0.42
GABRB3-204ENST00000541819 A0A087WZG4 1122 aa12.45□□□□□ -0.42
GABRB3-204ENST00000541819 TDRD12Q587J7 1177 aaKnown RBP12.45□□□□□ -0.42
GABRB3-204ENST00000541819 KLHL10Q6JEL2 608 aa12.45□□□□□ -0.42
GABRB3-204ENST00000541819 ATF7IPQ6VMQ6 1270 aa12.45□□□□□ -0.42
GABRB3-204ENST00000541819 IQCA1Q86XH1 822 aa12.45□□□□□ -0.42
GABRB3-204ENST00000541819 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
GABRB3-204ENST00000541819 ANO10Q9NW15 660 aa12.45□□□□□ -0.42
GABRB3-204ENST00000541819 MVPQ14764 893 aaKnown RBP12.45□□□□□ -0.42
GABRB3-204ENST00000541819 SPATA24Q86W54 205 aa12.45□□□□□ -0.42
GABRB3-204ENST00000541819 BCCIPQ9P287 314 aaKnown RBP eCLIP12.45□□□□□ -0.42
GABRB3-204ENST00000541819 CCDC83Q8IWF9 413 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 CCDC194A0A1B0GVG4 234 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 YEATS4O95619 227 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 MRPS9P82933 396 aaKnown RBP12.44□□□□□ -0.42
GABRB3-204ENST00000541819 ALS2CR12Q96Q35 445 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 CA8P35219 290 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 SSRP1Q08945 709 aaKnown RBP12.44□□□□□ -0.42
GABRB3-204ENST00000541819 NUP88Q99567 741 aaPredicted RBP12.44□□□□□ -0.42
GABRB3-204ENST00000541819 RNF41Q9H4P4 317 aaPredicted RBP12.44□□□□□ -0.42
GABRB3-204ENST00000541819 GNAT3A8MTJ3 354 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 PDCL2Q8N4E4 241 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 SLC12A7Q9Y666 1083 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 ANKRD30BQ9BXX2 1392 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 ERICH4A6NGS2 130 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 RANBP6O60518 1105 aaKnown RBP12.44□□□□□ -0.42
GABRB3-204ENST00000541819 RAB11FIP3O75154 756 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 TOP1P11387 765 aaKnown RBP12.44□□□□□ -0.42
GABRB3-204ENST00000541819 LMAN1P49257 510 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 KIF4BQ2VIQ3 1234 aa12.44□□□□□ -0.42
GABRB3-204ENST00000541819 NAA15Q9BXJ9 866 aaKnown RBP12.44□□□□□ -0.42
GABRB3-204ENST00000541819 NLRP5P59047 1200 aa12.43□□□□□ -0.42
GABRB3-204ENST00000541819 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
GABRB3-204ENST00000541819 CCDC12Q8WUD4 166 aaPredicted RBP12.43□□□□□ -0.42
GABRB3-204ENST00000541819 FSD2A1L4K1 749 aa12.43□□□□□ -0.42
GABRB3-204ENST00000541819 TNNT1P13805 278 aa12.43□□□□□ -0.42
GABRB3-204ENST00000541819 CAMK4Q16566 473 aa12.43□□□□□ -0.42
GABRB3-204ENST00000541819 RPAP2Q8IXW5 612 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms