RNA–Protein interactions for RNA: ENST00000541806.5

CLDN2-203, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 3,150 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-203ENST00000541806 PIK3C2AO00443 1686 aa10.69□□□□□ -0.7
CLDN2-203ENST00000541806 ANKARQ7Z5J8 1434 aa10.69□□□□□ -0.7
CLDN2-203ENST00000541806 HSP90AB1P08238 724 aaKnown RBP10.69□□□□□ -0.7
CLDN2-203ENST00000541806 TEFQ10587 303 aa10.69□□□□□ -0.7
CLDN2-203ENST00000541806 PAXIP1Q6ZW49 1069 aaPredicted RBP10.69□□□□□ -0.7
CLDN2-203ENST00000541806 CDC45O75419 566 aa10.68□□□□□ -0.7
CLDN2-203ENST00000541806 GCP02774 474 aa10.68□□□□□ -0.7
CLDN2-203ENST00000541806 CCT4P50991 539 aaKnown RBP10.68□□□□□ -0.7
CLDN2-203ENST00000541806 RRP9O43818 475 aaKnown RBP10.68□□□□□ -0.7
CLDN2-203ENST00000541806 HMMRO75330 724 aa10.67□□□□□ -0.7
CLDN2-203ENST00000541806 GNAI2P04899 355 aa10.67□□□□□ -0.7
CLDN2-203ENST00000541806 ANTXR1Q9H6X2 564 aa10.67□□□□□ -0.7
CLDN2-203ENST00000541806 BRPF3Q9ULD4 1205 aa10.67□□□□□ -0.7
CLDN2-203ENST00000541806 VIRMAQ69YN4 1812 aaKnown RBP10.67□□□□□ -0.7
CLDN2-203ENST00000541806 LRRFIP2Q9Y608 721 aaKnown RBP10.67□□□□□ -0.7
CLDN2-203ENST00000541806 TTC22Q5TAA0 569 aa10.67□□□□□ -0.7
CLDN2-203ENST00000541806 KRT28Q7Z3Y7 464 aa10.67□□□□□ -0.7
CLDN2-203ENST00000541806 NAP1L5Q96NT1 182 aaPredicted RBP10.67□□□□□ -0.7
CLDN2-203ENST00000541806 GZF1Q9H116 711 aaPredicted RBP10.67□□□□□ -0.7
CLDN2-203ENST00000541806 PNMA6EA0A0J9YXQ4 647 aa10.66□□□□□ -0.7
CLDN2-203ENST00000541806 HTATSF1O43719 755 aaKnown RBP10.66□□□□□ -0.7
CLDN2-203ENST00000541806 KCNH5Q8NCM2 988 aa10.66□□□□□ -0.7
CLDN2-203ENST00000541806 ANKRD24Q8TF21 1146 aa10.66□□□□□ -0.7
CLDN2-203ENST00000541806 ATP10DQ9P241 1426 aa10.66□□□□□ -0.7
CLDN2-203ENST00000541806 BTBD11A6QL63 1104 aa10.66□□□□□ -0.7
CLDN2-203ENST00000541806 CD2BP2O95400 341 aaKnown RBP10.66□□□□□ -0.7
CLDN2-203ENST00000541806 SDSP20132 328 aa10.66□□□□□ -0.7
CLDN2-203ENST00000541806 XRN1Q8IZH2 1706 aaKnown RBP10.66□□□□□ -0.7
CLDN2-203ENST00000541806 C1orf141Q5JVX7 400 aa10.65□□□□□ -0.7
CLDN2-203ENST00000541806 CABLES1Q8TDN4 633 aa10.65□□□□□ -0.7
CLDN2-203ENST00000541806 CHPF2Q9P2E5 772 aa10.65□□□□□ -0.7
CLDN2-203ENST00000541806 AXIN2Q9Y2T1 843 aa10.65□□□□□ -0.7
CLDN2-203ENST00000541806 NALCNQ8IZF0 1738 aa10.65□□□□□ -0.7
CLDN2-203ENST00000541806 IL1RAPL2Q9NP60 686 aa10.65□□□□□ -0.7
CLDN2-203ENST00000541806 NPHP4O75161 1426 aaPredicted RBP10.65□□□□□ -0.71
CLDN2-203ENST00000541806 RBM25P49756 843 aaKnown RBP10.65□□□□□ -0.71
CLDN2-203ENST00000541806 RGPD1P0DJD0 1748 aa10.64□□□□□ -0.71
CLDN2-203ENST00000541806 KIF24Q5T7B8 1368 aa10.64□□□□□ -0.71
CLDN2-203ENST00000541806 UBTFL1P0CB47 393 aaPredicted RBP10.64□□□□□ -0.71
CLDN2-203ENST00000541806 PLEKHO1Q53GL0 409 aaPredicted RBP10.64□□□□□ -0.71
CLDN2-203ENST00000541806 TRIM6-TRIM34B2RNG4 842 aa10.64□□□□□ -0.71
CLDN2-203ENST00000541806 RILPL2Q969X0 211 aa10.64□□□□□ -0.71
CLDN2-203ENST00000541806 NLRP2Q9NX02 1062 aa10.64□□□□□ -0.71
CLDN2-203ENST00000541806 PRAMEF22A3QJZ6 481 aa10.63□□□□□ -0.71
CLDN2-203ENST00000541806 GNAI3P08754 354 aa10.63□□□□□ -0.71
CLDN2-203ENST00000541806 CSB-PGBD3P0DP91 1061 aa10.63□□□□□ -0.71
CLDN2-203ENST00000541806 BRD2P25440 801 aaKnown RBP10.63□□□□□ -0.71
CLDN2-203ENST00000541806 CHMP5Q9NZZ3 219 aa10.63□□□□□ -0.71
CLDN2-203ENST00000541806 ADGRL3Q9HAR2 1447 aa10.63□□□□□ -0.71
CLDN2-203ENST00000541806 PI4KAP2A4QPH2 592 aa10.63□□□□□ -0.71
CLDN2-203ENST00000541806 FAM43AQ8N2R8 423 aa10.63□□□□□ -0.71
CLDN2-203ENST00000541806 PI4KAP1Q8N8J0 262 aa10.63□□□□□ -0.71
CLDN2-203ENST00000541806 KIF2CQ99661 725 aa10.63□□□□□ -0.71
CLDN2-203ENST00000541806 NAP1L2Q9ULW6 460 aaPredicted RBP10.63□□□□□ -0.71
CLDN2-203ENST00000541806 EIF4A1P60842 406 aaKnown RBP10.63□□□□□ -0.71
CLDN2-203ENST00000541806 AIMP1Q12904 312 aaKnown RBP10.63□□□□□ -0.71
CLDN2-203ENST00000541806 CASC1Q6TDU7 716 aa10.63□□□□□ -0.71
CLDN2-203ENST00000541806 ARHGEF25Q86VW2 580 aa10.63□□□□□ -0.71
CLDN2-203ENST00000541806 MAP4K4O95819 1239 aaPredicted RBP10.62□□□□□ -0.71
CLDN2-203ENST00000541806 ATF3P18847 181 aa10.62□□□□□ -0.71
CLDN2-203ENST00000541806 HSPA2P54652 639 aa10.62□□□□□ -0.71
CLDN2-203ENST00000541806 CHRNA2Q15822 529 aa10.62□□□□□ -0.71
CLDN2-203ENST00000541806 USP44Q9H0E7 712 aa10.62□□□□□ -0.71
CLDN2-203ENST00000541806 FMN2Q9NZ56 1722 aa10.62□□□□□ -0.71
CLDN2-203ENST00000541806 PDE1AP54750 535 aa10.62□□□□□ -0.71
CLDN2-203ENST00000541806 NUTM1Q86Y26 1132 aa10.62□□□□□ -0.71
CLDN2-203ENST00000541806 LRRCC1Q9C099 1032 aa10.62□□□□□ -0.71
CLDN2-203ENST00000541806 SRCIN1Q9C0H9 1055 aa10.62□□□□□ -0.71
CLDN2-203ENST00000541806 SURF6O75683 361 aaKnown RBP10.61□□□□□ -0.71
CLDN2-203ENST00000541806 SLC39A6Q13433 755 aa10.61□□□□□ -0.71
CLDN2-203ENST00000541806 NBPF7P0C2Y1 421 aaPredicted RBP10.61□□□□□ -0.71
CLDN2-203ENST00000541806 AKAP4Q5JQC9 854 aa10.61□□□□□ -0.71
CLDN2-203ENST00000541806 NWD1Q149M9 1564 aa10.61□□□□□ -0.71
CLDN2-203ENST00000541806 RNMTO43148 476 aaKnown RBP10.61□□□□□ -0.71
CLDN2-203ENST00000541806 ATP8B2P98198 1209 aa10.61□□□□□ -0.71
CLDN2-203ENST00000541806 DHX37Q8IY37 1157 aaKnown RBP10.61□□□□□ -0.71
CLDN2-203ENST00000541806 MCM4P33991 863 aa10.6□□□□□ -0.71
CLDN2-203ENST00000541806 PROSER3Q2NL68 480 aa10.6□□□□□ -0.71
CLDN2-203ENST00000541806 PPP1R42Q7Z4L9 355 aa10.6□□□□□ -0.71
CLDN2-203ENST00000541806 SRGAP3O43295 1099 aa10.6□□□□□ -0.71
CLDN2-203ENST00000541806 OS9Q13438 667 aaPredicted RBP10.6□□□□□ -0.71
CLDN2-203ENST00000541806 NOL8Q76FK4 1167 aaKnown RBP10.6□□□□□ -0.71
CLDN2-203ENST00000541806 C19orf44Q9H6X5 657 aa10.6□□□□□ -0.71
CLDN2-203ENST00000541806 K7ELQ4 463 aaPredicted RBP10.59□□□□□ -0.71
CLDN2-203ENST00000541806 PIP4K2AP48426 406 aaPredicted RBP10.59□□□□□ -0.71
CLDN2-203ENST00000541806 DNAAF4Q8WXU2 420 aa10.59□□□□□ -0.71
CLDN2-203ENST00000541806 CHMP4AQ9BY43 222 aa10.59□□□□□ -0.71
CLDN2-203ENST00000541806 MX1P20591 662 aa10.59□□□□□ -0.71
CLDN2-203ENST00000541806 BBXQ8WY36 941 aaPredicted RBP10.59□□□□□ -0.71
CLDN2-203ENST00000541806 RAPGEF4Q8WZA2 1011 aa10.59□□□□□ -0.71
CLDN2-203ENST00000541806 USP26Q9BXU7 913 aa10.59□□□□□ -0.71
CLDN2-203ENST00000541806 AMOTQ4VCS5 1084 aa10.59□□□□□ -0.71
CLDN2-203ENST00000541806 MYL6BP14649 208 aa10.58□□□□□ -0.72
CLDN2-203ENST00000541806 SNX21Q969T3 373 aa10.58□□□□□ -0.72
CLDN2-203ENST00000541806 CWF19L2Q2TBE0 894 aaKnown RBP10.58□□□□□ -0.72
CLDN2-203ENST00000541806 C9orf78Q9NZ63 289 aaPredicted RBP10.58□□□□□ -0.72
CLDN2-203ENST00000541806 MAP3K2Q9Y2U5 619 aa10.58□□□□□ -0.72
CLDN2-203ENST00000541806 UNC5CLQ8IV45 518 aa10.57□□□□□ -0.72
CLDN2-203ENST00000541806 ANO2Q9NQ90 1003 aa10.57□□□□□ -0.72
CLDN2-203ENST00000541806 CEMIPQ8WUJ3 1361 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms