RNA–Protein interactions for RNA: ENST00000541699.1

PGA3-206, Transcript of pepsinogen 3, group I (pepsinogen A), humanhuman

TSL 2

Gene PGA3, Length 925 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGA3-206ENST00000541699 TRMT2AQ8IZ69 625 aaKnown RBP17.09■□□□□ 0.33
PGA3-206ENST00000541699 TMOD3Q9NYL9 352 aa17.09■□□□□ 0.33
PGA3-206ENST00000541699 SIPA1L3O60292 1781 aaPredicted RBP17.09■□□□□ 0.33
PGA3-206ENST00000541699 SLFN5Q08AF3 891 aa17.08■□□□□ 0.32
PGA3-206ENST00000541699 PIGBQ92521 554 aa17.08■□□□□ 0.32
PGA3-206ENST00000541699 BCL11BQ9C0K0 894 aaPredicted RBP17.08■□□□□ 0.32
PGA3-206ENST00000541699 KCNQ2O43526 872 aa17.07■□□□□ 0.32
PGA3-206ENST00000541699 ACSBG1Q96GR2 724 aa17.07■□□□□ 0.32
PGA3-206ENST00000541699 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
PGA3-206ENST00000541699 ITGB4P16144 1822 aa17.07■□□□□ 0.32
PGA3-206ENST00000541699 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
PGA3-206ENST00000541699 DOT1LQ8TEK3 1739 aa17.07■□□□□ 0.32
PGA3-206ENST00000541699 BTBD11A6QL63 1104 aa17.06■□□□□ 0.32
PGA3-206ENST00000541699 E9PSI1 815 aa17.06■□□□□ 0.32
PGA3-206ENST00000541699 YTHDC1Q96MU7 727 aaKnown RBP17.06■□□□□ 0.32
PGA3-206ENST00000541699 NHSQ6T4R5 1651 aa17.06■□□□□ 0.32
PGA3-206ENST00000541699 CDCA7LQ96GN5 454 aa17.05■□□□□ 0.32
PGA3-206ENST00000541699 ZNF790Q6PG37 636 aa17.04■□□□□ 0.32
PGA3-206ENST00000541699 SYTL4Q96C24 671 aaPredicted RBP17.04■□□□□ 0.32
PGA3-206ENST00000541699 MYH16Q9H6N6 1097 aa17.04■□□□□ 0.32
PGA3-206ENST00000541699 MBIPQ9NS73 344 aa17.04■□□□□ 0.32
PGA3-206ENST00000541699 ATG3Q9NT62 314 aa17.04■□□□□ 0.32
PGA3-206ENST00000541699 MIS18AQ9NYP9 233 aa17.04■□□□□ 0.32
PGA3-206ENST00000541699 PTF1AQ7RTS3 328 aa17.03■□□□□ 0.32
PGA3-206ENST00000541699 TSPYL4Q9UJ04 414 aa17.03■□□□□ 0.32
PGA3-206ENST00000541699 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.32
PGA3-206ENST00000541699 KAT6BQ8WYB5 2073 aa17.02■□□□□ 0.32
PGA3-206ENST00000541699 SMARCC1Q92922 1105 aaPredicted RBP17.02■□□□□ 0.32
PGA3-206ENST00000541699 ASAP1Q9ULH1 1129 aa17.02■□□□□ 0.32
PGA3-206ENST00000541699 KDM3BQ7LBC6 1761 aa17.02■□□□□ 0.31
PGA3-206ENST00000541699 FANCIQ9NVI1 1328 aa17.01■□□□□ 0.31
PGA3-206ENST00000541699 PAPPAQ13219 1627 aa17.01■□□□□ 0.31
PGA3-206ENST00000541699 KCNQ3O43525 872 aa17.01■□□□□ 0.31
PGA3-206ENST00000541699 TRIM37O94972 964 aa17.01■□□□□ 0.31
PGA3-206ENST00000541699 EIF4A1P60842 406 aaKnown RBP17.01■□□□□ 0.31
PGA3-206ENST00000541699 SLC39A6Q13433 755 aa17.01■□□□□ 0.31
PGA3-206ENST00000541699 DUSP27Q5VZP5 1158 aa17.01■□□□□ 0.31
PGA3-206ENST00000541699 LAS1LQ9Y4W2 734 aaKnown RBP17.01■□□□□ 0.31
PGA3-206ENST00000541699 TTC5Q8N0Z6 440 aa17■□□□□ 0.31
PGA3-206ENST00000541699 VSIG10Q8N0Z9 540 aa16.99■□□□□ 0.31
PGA3-206ENST00000541699 TSR2Q969E8 191 aaKnown RBP16.99■□□□□ 0.31
PGA3-206ENST00000541699 ZNF496Q96IT1 587 aaPredicted RBP16.99■□□□□ 0.31
PGA3-206ENST00000541699 SOS1Q07889 1333 aaPredicted RBP16.98■□□□□ 0.31
PGA3-206ENST00000541699 BTAF1O14981 1849 aa16.98■□□□□ 0.31
PGA3-206ENST00000541699 UBR2Q8IWV8 1755 aa16.98■□□□□ 0.31
PGA3-206ENST00000541699 KCPQ6ZWJ8 1503 aa16.98■□□□□ 0.31
PGA3-206ENST00000541699 PLSCR1O15162 318 aa16.98■□□□□ 0.31
PGA3-206ENST00000541699 CCDC125Q86Z20 511 aa16.98■□□□□ 0.31
PGA3-206ENST00000541699 FMNL2Q96PY5 1086 aa16.98■□□□□ 0.31
PGA3-206ENST00000541699 PALLDQ8WX93 1383 aa16.97■□□□□ 0.31
PGA3-206ENST00000541699 GIGYF1O75420 1035 aaPredicted RBP16.96■□□□□ 0.31
PGA3-206ENST00000541699 HOXB7P09629 217 aa16.96■□□□□ 0.31
PGA3-206ENST00000541699 EXOSC9Q06265 439 aaKnown RBP16.96■□□□□ 0.31
PGA3-206ENST00000541699 C8orf58Q8NAV2 365 aa16.96■□□□□ 0.31
PGA3-206ENST00000541699 CT47B1P0C2W7 299 aaPredicted RBP16.95■□□□□ 0.3
PGA3-206ENST00000541699 SLC4A9Q96Q91 983 aa16.95■□□□□ 0.3
PGA3-206ENST00000541699 ZNF831Q5JPB2 1677 aa16.94■□□□□ 0.3
PGA3-206ENST00000541699 LOC102724428A0A0B4J2F2 783 aa16.94■□□□□ 0.3
PGA3-206ENST00000541699 PTCD1O75127 700 aaKnown RBP16.94■□□□□ 0.3
PGA3-206ENST00000541699 SNRPA1P09661 255 aaKnown RBP16.94■□□□□ 0.3
PGA3-206ENST00000541699 SIK1P57059 783 aa16.94■□□□□ 0.3
PGA3-206ENST00000541699 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
PGA3-206ENST00000541699 TNS1Q9HBL0 1735 aaKnown RBP16.93■□□□□ 0.3
PGA3-206ENST00000541699 APBA3O96018 575 aa16.93■□□□□ 0.3
PGA3-206ENST00000541699 KRT24Q2M2I5 525 aa16.93■□□□□ 0.3
PGA3-206ENST00000541699 ILDR2Q71H61 639 aa16.93■□□□□ 0.3
PGA3-206ENST00000541699 TSPYL6Q8N831 410 aa16.93■□□□□ 0.3
PGA3-206ENST00000541699 ZNF428Q96B54 188 aa16.93■□□□□ 0.3
PGA3-206ENST00000541699 LY75O60449 1722 aa16.93■□□□□ 0.3
PGA3-206ENST00000541699 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
PGA3-206ENST00000541699 VAMP4O75379 141 aa16.92■□□□□ 0.3
PGA3-206ENST00000541699 HMGB2P26583 209 aaKnown RBP16.92■□□□□ 0.3
PGA3-206ENST00000541699 TWISTNBQ3B726 338 aaPredicted RBP16.92■□□□□ 0.3
PGA3-206ENST00000541699 CHMP4AQ9BY43 222 aa16.92■□□□□ 0.3
PGA3-206ENST00000541699 SLC27A3Q5K4L6 730 aa16.91■□□□□ 0.3
PGA3-206ENST00000541699 PROM2Q8N271 834 aa16.91■□□□□ 0.3
PGA3-206ENST00000541699 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
PGA3-206ENST00000541699 RGPD3A6NKT7 1758 aaPredicted RBP16.9■□□□□ 0.3
PGA3-206ENST00000541699 RGPD4Q7Z3J3 1758 aa16.9■□□□□ 0.3
PGA3-206ENST00000541699 ATP6V1AP38606 617 aa16.9■□□□□ 0.3
PGA3-206ENST00000541699 TXNRD1Q16881 649 aa16.9■□□□□ 0.3
PGA3-206ENST00000541699 CAMKK2Q96RR4 588 aa16.9■□□□□ 0.3
PGA3-206ENST00000541699 PRAMEF22A3QJZ6 481 aa16.89■□□□□ 0.29
PGA3-206ENST00000541699 ELL2O00472 640 aaPredicted RBP16.89■□□□□ 0.29
PGA3-206ENST00000541699 SF3B2Q13435 895 aaKnown RBP16.89■□□□□ 0.29
PGA3-206ENST00000541699 ITPK1Q13572 414 aa16.89■□□□□ 0.29
PGA3-206ENST00000541699 DNAJC10Q8IXB1 793 aa16.89■□□□□ 0.29
PGA3-206ENST00000541699 UPF1Q92900 1129 aaKnown RBP eCLIP16.89■□□□□ 0.29
PGA3-206ENST00000541699 CCNL1Q9UK58 526 aaPredicted RBP16.89■□□□□ 0.29
PGA3-206ENST00000541699 USP16Q9Y5T5 823 aa16.89■□□□□ 0.29
PGA3-206ENST00000541699 STARD3NLO95772 234 aa16.88■□□□□ 0.29
PGA3-206ENST00000541699 BAG6P46379 1132 aa16.88■□□□□ 0.29
PGA3-206ENST00000541699 EP400Q96L91 3159 aa16.87■□□□□ 0.29
PGA3-206ENST00000541699 CYP19A1P11511 503 aaPredicted RBP16.87■□□□□ 0.29
PGA3-206ENST00000541699 LRRC4BQ9NT99 713 aa16.87■□□□□ 0.29
PGA3-206ENST00000541699 ERBB4Q15303 1308 aa16.87■□□□□ 0.29
PGA3-206ENST00000541699 TJP1Q07157 1748 aa16.87■□□□□ 0.29
PGA3-206ENST00000541699 ALDH1L2Q3SY69 923 aa16.86■□□□□ 0.29
PGA3-206ENST00000541699 RC3H1Q5TC82 1133 aaKnown RBP16.86■□□□□ 0.29
PGA3-206ENST00000541699 C5P01031 1676 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms