RNA–Protein interactions for RNA: ENST00000541669.5

LDHC-207, Transcript of lactate dehydrogenase C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHC, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-207ENST00000541669 IFT57Q9NWB7 429 aa12.69□□□□□ -0.38
LDHC-207ENST00000541669 GNAI1P63096 354 aa12.69□□□□□ -0.38
LDHC-207ENST00000541669 SLFN5Q08AF3 891 aa12.69□□□□□ -0.38
LDHC-207ENST00000541669 TEFQ10587 303 aa12.69□□□□□ -0.38
LDHC-207ENST00000541669 CDCA7LQ96GN5 454 aa12.69□□□□□ -0.38
LDHC-207ENST00000541669 CFAP44Q96MT7 982 aa12.69□□□□□ -0.38
LDHC-207ENST00000541669 RGS12O14924 1447 aa12.68□□□□□ -0.38
LDHC-207ENST00000541669 ERVV-2B6SEH9 535 aa12.68□□□□□ -0.38
LDHC-207ENST00000541669 SLC52A2Q9HAB3 445 aa12.68□□□□□ -0.38
LDHC-207ENST00000541669 SPINK5Q9NQ38 1064 aaPredicted RBP12.68□□□□□ -0.38
LDHC-207ENST00000541669 BTAF1O14981 1849 aa12.68□□□□□ -0.38
LDHC-207ENST00000541669 BCL9O00512 1426 aa12.68□□□□□ -0.38
LDHC-207ENST00000541669 ZNF853P0CG23 659 aa12.67□□□□□ -0.38
LDHC-207ENST00000541669 TRMT2AQ8IZ69 625 aaKnown RBP12.67□□□□□ -0.38
LDHC-207ENST00000541669 MYH16Q9H6N6 1097 aa12.67□□□□□ -0.38
LDHC-207ENST00000541669 BABAM1Q9NWV8 329 aa12.67□□□□□ -0.38
LDHC-207ENST00000541669 TAF7Q15545 349 aaPredicted RBP12.67□□□□□ -0.38
LDHC-207ENST00000541669 LAS1LQ9Y4W2 734 aaKnown RBP12.66□□□□□ -0.38
LDHC-207ENST00000541669 FANCIQ9NVI1 1328 aa12.66□□□□□ -0.38
LDHC-207ENST00000541669 CHL1O00533 1208 aa12.66□□□□□ -0.38
LDHC-207ENST00000541669 CABP4P57796 275 aa12.66□□□□□ -0.38
LDHC-207ENST00000541669 DUSP27Q5VZP5 1158 aa12.66□□□□□ -0.38
LDHC-207ENST00000541669 KRT27Q7Z3Y8 459 aa12.65□□□□□ -0.38
LDHC-207ENST00000541669 NFATC2IPQ8NCF5 419 aa12.65□□□□□ -0.38
LDHC-207ENST00000541669 MBIPQ9NS73 344 aa12.65□□□□□ -0.38
LDHC-207ENST00000541669 BTBD11A6QL63 1104 aa12.64□□□□□ -0.39
LDHC-207ENST00000541669 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
LDHC-207ENST00000541669 TSPYL4Q9UJ04 414 aa12.64□□□□□ -0.39
LDHC-207ENST00000541669 TMOD3Q9NYL9 352 aa12.64□□□□□ -0.39
LDHC-207ENST00000541669 LAMB4A4D0S4 1761 aa12.64□□□□□ -0.39
LDHC-207ENST00000541669 C5P01031 1676 aa12.63□□□□□ -0.39
LDHC-207ENST00000541669 CENPBP07199 599 aaPredicted RBP12.63□□□□□ -0.39
LDHC-207ENST00000541669 MIS18AQ9NYP9 233 aa12.63□□□□□ -0.39
LDHC-207ENST00000541669 PRIM1P49642 420 aaKnown RBP12.62□□□□□ -0.39
LDHC-207ENST00000541669 LY75O60449 1722 aa12.62□□□□□ -0.39
LDHC-207ENST00000541669 FAM182BQ5T319 152 aa12.61□□□□□ -0.39
LDHC-207ENST00000541669 FAM196AQ6ZSG2 479 aa12.61□□□□□ -0.39
LDHC-207ENST00000541669 PIGBQ92521 554 aa12.61□□□□□ -0.39
LDHC-207ENST00000541669 SYTL4Q96C24 671 aaPredicted RBP12.61□□□□□ -0.39
LDHC-207ENST00000541669 ACSBG1Q96GR2 724 aa12.61□□□□□ -0.39
LDHC-207ENST00000541669 ZNF831Q5JPB2 1677 aa12.61□□□□□ -0.39
LDHC-207ENST00000541669 KCPQ6ZWJ8 1503 aa12.61□□□□□ -0.39
LDHC-207ENST00000541669 ZNF790Q6PG37 636 aa12.61□□□□□ -0.39
LDHC-207ENST00000541669 TNS1Q9HBL0 1735 aaKnown RBP12.6□□□□□ -0.39
LDHC-207ENST00000541669 CICQ96RK0 1608 aaPredicted RBP12.6□□□□□ -0.39
LDHC-207ENST00000541669 EXOSC9Q06265 439 aaKnown RBP12.6□□□□□ -0.39
LDHC-207ENST00000541669 TTC5Q8N0Z6 440 aa12.6□□□□□ -0.39
LDHC-207ENST00000541669 TAF1LQ8IZX4 1826 aa12.59□□□□□ -0.39
LDHC-207ENST00000541669 SLC39A6Q13433 755 aa12.59□□□□□ -0.39
LDHC-207ENST00000541669 KCNQ3O43525 872 aa12.59□□□□□ -0.39
LDHC-207ENST00000541669 KCNQ2O43526 872 aa12.59□□□□□ -0.39
LDHC-207ENST00000541669 CT47B1P0C2W7 299 aaPredicted RBP12.59□□□□□ -0.39
LDHC-207ENST00000541669 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
LDHC-207ENST00000541669 TJP1Q07157 1748 aa12.58□□□□□ -0.39
LDHC-207ENST00000541669 RGPD3A6NKT7 1758 aaPredicted RBP12.58□□□□□ -0.4
LDHC-207ENST00000541669 RGPD4Q7Z3J3 1758 aa12.58□□□□□ -0.4
LDHC-207ENST00000541669 HEG1Q9ULI3 1381 aa12.58□□□□□ -0.4
LDHC-207ENST00000541669 COL5A3P25940 1745 aaPredicted RBP12.58□□□□□ -0.4
LDHC-207ENST00000541669 SOS1Q07889 1333 aaPredicted RBP12.58□□□□□ -0.4
LDHC-207ENST00000541669 ATG3Q9NT62 314 aa12.57□□□□□ -0.4
LDHC-207ENST00000541669 TWISTNBQ3B726 338 aaPredicted RBP12.57□□□□□ -0.4
LDHC-207ENST00000541669 C8orf58Q8NAV2 365 aa12.57□□□□□ -0.4
LDHC-207ENST00000541669 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
LDHC-207ENST00000541669 ASAP1Q9ULH1 1129 aa12.57□□□□□ -0.4
LDHC-207ENST00000541669 KRT24Q2M2I5 525 aa12.56□□□□□ -0.4
LDHC-207ENST00000541669 TSPYL6Q8N831 410 aa12.56□□□□□ -0.4
LDHC-207ENST00000541669 ZNF496Q96IT1 587 aaPredicted RBP12.56□□□□□ -0.4
LDHC-207ENST00000541669 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
LDHC-207ENST00000541669 HOXB7P09629 217 aa12.55□□□□□ -0.4
LDHC-207ENST00000541669 SMARCC1Q92922 1105 aaPredicted RBP12.55□□□□□ -0.4
LDHC-207ENST00000541669 ZNF428Q96B54 188 aa12.55□□□□□ -0.4
LDHC-207ENST00000541669 MYH14Q7Z406 1995 aaKnown RBP12.55□□□□□ -0.4
LDHC-207ENST00000541669 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
LDHC-207ENST00000541669 VAMP4O75379 141 aa12.55□□□□□ -0.4
LDHC-207ENST00000541669 PALLDQ8WX93 1383 aa12.55□□□□□ -0.4
LDHC-207ENST00000541669 GIGYF1O75420 1035 aaPredicted RBP12.54□□□□□ -0.4
LDHC-207ENST00000541669 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
LDHC-207ENST00000541669 PTF1AQ7RTS3 328 aa12.54□□□□□ -0.4
LDHC-207ENST00000541669 VSIG10Q8N0Z9 540 aa12.54□□□□□ -0.4
LDHC-207ENST00000541669 RCAN3Q9UKA8 241 aa12.54□□□□□ -0.4
LDHC-207ENST00000541669 PTCD1O75127 700 aaKnown RBP12.53□□□□□ -0.4
LDHC-207ENST00000541669 TRIM37O94972 964 aa12.53□□□□□ -0.4
LDHC-207ENST00000541669 SNRPA1P09661 255 aaKnown RBP12.53□□□□□ -0.4
LDHC-207ENST00000541669 CHMP4AQ9BY43 222 aa12.53□□□□□ -0.4
LDHC-207ENST00000541669 RREB1Q92766 1687 aa12.52□□□□□ -0.4
LDHC-207ENST00000541669 RARSP54136 660 aaKnown RBP12.52□□□□□ -0.41
LDHC-207ENST00000541669 ALDH1L2Q3SY69 923 aa12.52□□□□□ -0.41
LDHC-207ENST00000541669 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
LDHC-207ENST00000541669 LOC102724428A0A0B4J2F2 783 aa12.5□□□□□ -0.41
LDHC-207ENST00000541669 PRAMEF22A3QJZ6 481 aa12.5□□□□□ -0.41
LDHC-207ENST00000541669 SIK1P57059 783 aa12.5□□□□□ -0.41
LDHC-207ENST00000541669 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
LDHC-207ENST00000541669 CCDC30Q5VVM6 783 aa12.5□□□□□ -0.41
LDHC-207ENST00000541669 TEX13AQ9BXU3 409 aaPredicted RBP12.5□□□□□ -0.41
LDHC-207ENST00000541669 SSH1Q8WYL5 1049 aa12.5□□□□□ -0.41
LDHC-207ENST00000541669 SLC4A9Q96Q91 983 aa12.5□□□□□ -0.41
LDHC-207ENST00000541669 EIF2S2P20042 333 aaKnown RBP12.49□□□□□ -0.41
LDHC-207ENST00000541669 SMC4Q9NTJ3 1288 aa12.49□□□□□ -0.41
LDHC-207ENST00000541669 N4BP2Q86UW6 1770 aaPredicted RBP12.49□□□□□ -0.41
LDHC-207ENST00000541669 C4BP0C0L5 1744 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms