RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 ADGRL3Q9HAR2 1447 aa16.38■□□□□ 0.21
PRKAB1-206ENST00000541640 DDX11L8A8MPP1 907 aa16.38■□□□□ 0.21
PRKAB1-206ENST00000541640 FKBP5Q13451 457 aaPredicted RBP16.38■□□□□ 0.21
PRKAB1-206ENST00000541640 RABEP1Q15276 862 aa16.38■□□□□ 0.21
PRKAB1-206ENST00000541640 CASC1Q6TDU7 716 aa16.38■□□□□ 0.21
PRKAB1-206ENST00000541640 RBM42Q9BTD8 480 aaKnown RBP16.38■□□□□ 0.21
PRKAB1-206ENST00000541640 CEMIPQ8WUJ3 1361 aa16.38■□□□□ 0.21
PRKAB1-206ENST00000541640 TUBGCP6Q96RT7 1819 aa16.37■□□□□ 0.21
PRKAB1-206ENST00000541640 APBB1O00213 710 aa16.37■□□□□ 0.21
PRKAB1-206ENST00000541640 RAB3GAP1Q15042 981 aa16.37■□□□□ 0.21
PRKAB1-206ENST00000541640 C14orf37Q86TY3 774 aa16.37■□□□□ 0.21
PRKAB1-206ENST00000541640 L1TD1Q5T7N2 865 aaKnown RBP16.36■□□□□ 0.21
PRKAB1-206ENST00000541640 KDM3BQ7LBC6 1761 aa16.36■□□□□ 0.21
PRKAB1-206ENST00000541640 LMO7Q8WWI1 1683 aa16.36■□□□□ 0.21
PRKAB1-206ENST00000541640 TRAK2O60296 914 aa16.35■□□□□ 0.21
PRKAB1-206ENST00000541640 PDE1AP54750 535 aa16.35■□□□□ 0.21
PRKAB1-206ENST00000541640 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
PRKAB1-206ENST00000541640 USHBP1Q8N6Y0 703 aa16.35■□□□□ 0.21
PRKAB1-206ENST00000541640 TNPO1Q92973 898 aaKnown RBP16.35■□□□□ 0.21
PRKAB1-206ENST00000541640 SALL3Q9BXA9 1300 aa16.35■□□□□ 0.21
PRKAB1-206ENST00000541640 KCNH5Q8NCM2 988 aa16.35■□□□□ 0.21
PRKAB1-206ENST00000541640 HSP90AA1P07900 732 aaKnown RBP16.34■□□□□ 0.21
PRKAB1-206ENST00000541640 PRKCSHP14314 528 aaPredicted RBP16.34■□□□□ 0.21
PRKAB1-206ENST00000541640 NBPF6Q5VWK0 638 aa16.34■□□□□ 0.21
PRKAB1-206ENST00000541640 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
PRKAB1-206ENST00000541640 NBPF4Q96M43 638 aa16.34■□□□□ 0.21
PRKAB1-206ENST00000541640 RGPD2P0DJD1 1756 aa16.34■□□□□ 0.21
PRKAB1-206ENST00000541640 REC8O95072 547 aa16.33■□□□□ 0.2
PRKAB1-206ENST00000541640 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.2
PRKAB1-206ENST00000541640 RBM33Q96EV2 1170 aaKnown RBP16.33■□□□□ 0.2
PRKAB1-206ENST00000541640 IBTKQ9P2D0 1353 aaPredicted RBP16.33■□□□□ 0.2
PRKAB1-206ENST00000541640 HOXB7P09629 217 aa16.33■□□□□ 0.2
PRKAB1-206ENST00000541640 PSME1Q06323 249 aa16.33■□□□□ 0.2
PRKAB1-206ENST00000541640 GBP4Q96PP9 640 aa16.33■□□□□ 0.2
PRKAB1-206ENST00000541640 LRRCC1Q9C099 1032 aa16.33■□□□□ 0.2
PRKAB1-206ENST00000541640 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.2
PRKAB1-206ENST00000541640 EXOC6BQ9Y2D4 811 aa16.33■□□□□ 0.2
PRKAB1-206ENST00000541640 PNMA6EA0A0J9YXQ4 647 aa16.32■□□□□ 0.2
PRKAB1-206ENST00000541640 FSD2A1L4K1 749 aa16.32■□□□□ 0.2
PRKAB1-206ENST00000541640 ESCO1Q5FWF5 840 aa16.32■□□□□ 0.2
PRKAB1-206ENST00000541640 STRCQ7RTU9 1775 aa16.32■□□□□ 0.2
PRKAB1-206ENST00000541640 ERC2O15083 957 aa16.31■□□□□ 0.2
PRKAB1-206ENST00000541640 USP44Q9H0E7 712 aa16.31■□□□□ 0.2
PRKAB1-206ENST00000541640 SLIT3O75094 1523 aa16.31■□□□□ 0.2
PRKAB1-206ENST00000541640 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
PRKAB1-206ENST00000541640 PTMSP20962 102 aa16.31■□□□□ 0.2
PRKAB1-206ENST00000541640 EIF4A1P60842 406 aaKnown RBP16.3■□□□□ 0.2
PRKAB1-206ENST00000541640 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
PRKAB1-206ENST00000541640 LRRFIP2Q9Y608 721 aaKnown RBP16.3■□□□□ 0.2
PRKAB1-206ENST00000541640 CLEC17AQ6ZS10 378 aa16.3■□□□□ 0.2
PRKAB1-206ENST00000541640 GOLGA6L3A6NEY3 463 aa16.29■□□□□ 0.2
PRKAB1-206ENST00000541640 PHAXQ9H814 394 aaKnown RBP16.29■□□□□ 0.2
PRKAB1-206ENST00000541640 LGR6Q9HBX8 967 aa16.29■□□□□ 0.2
PRKAB1-206ENST00000541640 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
PRKAB1-206ENST00000541640 UBTFL1P0CB47 393 aaPredicted RBP16.29■□□□□ 0.2
PRKAB1-206ENST00000541640 MX1P20591 662 aa16.29■□□□□ 0.2
PRKAB1-206ENST00000541640 AKAP4Q5JQC9 854 aa16.29■□□□□ 0.2
PRKAB1-206ENST00000541640 SRCIN1Q9C0H9 1055 aa16.29■□□□□ 0.2
PRKAB1-206ENST00000541640 STAP2Q9UGK3 403 aa16.29■□□□□ 0.2
PRKAB1-206ENST00000541640 CAMTA1Q9Y6Y1 1673 aa16.28■□□□□ 0.2
PRKAB1-206ENST00000541640 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
PRKAB1-206ENST00000541640 SSH3Q8TE77 659 aa16.28■□□□□ 0.2
PRKAB1-206ENST00000541640 GZF1Q9H116 711 aaPredicted RBP16.28■□□□□ 0.2
PRKAB1-206ENST00000541640 OVOS2A0A0G2JMS6 1433 aa16.28■□□□□ 0.2
PRKAB1-206ENST00000541640 AOX1Q06278 1338 aa16.27■□□□□ 0.2
PRKAB1-206ENST00000541640 SKOR2Q2VWA4 1001 aaPredicted RBP16.27■□□□□ 0.2
PRKAB1-206ENST00000541640 PLEKHO1Q53GL0 409 aaPredicted RBP16.27■□□□□ 0.2
PRKAB1-206ENST00000541640 TRPM3Q9HCF6 1732 aaPredicted RBP16.27■□□□□ 0.2
PRKAB1-206ENST00000541640 ST18O60284 1047 aa16.27■□□□□ 0.19
PRKAB1-206ENST00000541640 AMOTQ4VCS5 1084 aa16.27■□□□□ 0.19
PRKAB1-206ENST00000541640 ARHGEF25Q86VW2 580 aa16.27■□□□□ 0.19
PRKAB1-206ENST00000541640 ZNF530Q6P9A1 599 aaPredicted RBP16.26■□□□□ 0.19
PRKAB1-206ENST00000541640 GCP02774 474 aa16.25■□□□□ 0.19
PRKAB1-206ENST00000541640 SSFA2P28290 1259 aa16.25■□□□□ 0.19
PRKAB1-206ENST00000541640 POLA2Q14181 598 aa16.25■□□□□ 0.19
PRKAB1-206ENST00000541640 LRRC59Q96AG4 307 aaKnown RBP16.25■□□□□ 0.19
PRKAB1-206ENST00000541640 ISY1Q9ULR0 285 aaKnown RBP16.25■□□□□ 0.19
PRKAB1-206ENST00000541640 RAB11FIP3O75154 756 aa16.25■□□□□ 0.19
PRKAB1-206ENST00000541640 TEFQ10587 303 aa16.25■□□□□ 0.19
PRKAB1-206ENST00000541640 ESYT1Q9BSJ8 1104 aa16.25■□□□□ 0.19
PRKAB1-206ENST00000541640 XRCC6P12956 609 aaKnown RBP eCLIP16.24■□□□□ 0.19
PRKAB1-206ENST00000541640 EIF2S2P20042 333 aaKnown RBP16.24■□□□□ 0.19
PRKAB1-206ENST00000541640 CWC22Q9HCG8 908 aaKnown RBP16.24■□□□□ 0.19
PRKAB1-206ENST00000541640 CHPF2Q9P2E5 772 aa16.24■□□□□ 0.19
PRKAB1-206ENST00000541640 STRCP1A6NGW2 1772 aa16.24■□□□□ 0.19
PRKAB1-206ENST00000541640 ZBTB7CA1YPR0 619 aa16.24■□□□□ 0.19
PRKAB1-206ENST00000541640 BTBD11A6QL63 1104 aa16.24■□□□□ 0.19
PRKAB1-206ENST00000541640 NUCB2P80303 420 aa16.24■□□□□ 0.19
PRKAB1-206ENST00000541640 TSHZ3Q63HK5 1081 aa16.24■□□□□ 0.19
PRKAB1-206ENST00000541640 ORAI2Q96SN7 254 aa16.24■□□□□ 0.19
PRKAB1-206ENST00000541640 PXDNQ92626 1479 aa16.24■□□□□ 0.19
PRKAB1-206ENST00000541640 KIF1AQ12756 1690 aa16.23■□□□□ 0.19
PRKAB1-206ENST00000541640 KCNQ3O43525 872 aa16.23■□□□□ 0.19
PRKAB1-206ENST00000541640 BEND3Q5T5X7 828 aa16.23■□□□□ 0.19
PRKAB1-206ENST00000541640 DNAAF4Q8WXU2 420 aa16.23■□□□□ 0.19
PRKAB1-206ENST00000541640 SIPA1L3O60292 1781 aaPredicted RBP16.23■□□□□ 0.19
PRKAB1-206ENST00000541640 RNMTO43148 476 aaKnown RBP16.23■□□□□ 0.19
PRKAB1-206ENST00000541640 CYP2E1P05181 493 aaPredicted RBP16.23■□□□□ 0.19
PRKAB1-206ENST00000541640 CHMLP26374 656 aa16.23■□□□□ 0.19
PRKAB1-206ENST00000541640 PPP1R42Q7Z4L9 355 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms