RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 ORAI2Q96SN7 254 aa18.41■□□□□ 0.54
VARS2-211ENST00000541562 GOLGA6L22H0YM25 854 aa18.41■□□□□ 0.54
VARS2-211ENST00000541562 RAB3GAP1Q15042 981 aa18.41■□□□□ 0.54
VARS2-211ENST00000541562 RPAP2Q8IXW5 612 aaPredicted RBP18.41■□□□□ 0.54
VARS2-211ENST00000541562 LRRCC1Q9C099 1032 aa18.41■□□□□ 0.54
VARS2-211ENST00000541562 MED14O60244 1454 aa18.4■□□□□ 0.54
VARS2-211ENST00000541562 CWF19L2Q2TBE0 894 aaKnown RBP18.4■□□□□ 0.54
VARS2-211ENST00000541562 RICTORQ6R327 1708 aa18.4■□□□□ 0.54
VARS2-211ENST00000541562 HOXC9P31274 260 aa18.4■□□□□ 0.54
VARS2-211ENST00000541562 PPP1R42Q7Z4L9 355 aa18.4■□□□□ 0.54
VARS2-211ENST00000541562 TEFQ10587 303 aa18.39■□□□□ 0.53
VARS2-211ENST00000541562 ZNF330Q9Y3S2 320 aaPredicted RBP18.39■□□□□ 0.53
VARS2-211ENST00000541562 MX1P20591 662 aa18.39■□□□□ 0.53
VARS2-211ENST00000541562 CABLES1Q8TDN4 633 aa18.39■□□□□ 0.53
VARS2-211ENST00000541562 ERC2O15083 957 aa18.39■□□□□ 0.53
VARS2-211ENST00000541562 ERBB4Q15303 1308 aa18.38■□□□□ 0.53
VARS2-211ENST00000541562 ST18O60284 1047 aa18.38■□□□□ 0.53
VARS2-211ENST00000541562 CCDC30Q5VVM6 783 aa18.38■□□□□ 0.53
VARS2-211ENST00000541562 ZNF530Q6P9A1 599 aaPredicted RBP18.38■□□□□ 0.53
VARS2-211ENST00000541562 RIMS1Q86UR5 1692 aaKnown RBP18.38■□□□□ 0.53
VARS2-211ENST00000541562 PROSER3Q2NL68 480 aa18.38■□□□□ 0.53
VARS2-211ENST00000541562 CFAP74Q9C0B2 1584 aa18.37■□□□□ 0.53
VARS2-211ENST00000541562 SYCE3A1L190 88 aa18.36■□□□□ 0.53
VARS2-211ENST00000541562 FOSBP53539 338 aa18.36■□□□□ 0.53
VARS2-211ENST00000541562 USP44Q9H0E7 712 aa18.36■□□□□ 0.53
VARS2-211ENST00000541562 RABEP1Q15276 862 aa18.36■□□□□ 0.53
VARS2-211ENST00000541562 SNX21Q969T3 373 aa18.36■□□□□ 0.53
VARS2-211ENST00000541562 PTCH1Q13635 1447 aa18.35■□□□□ 0.53
VARS2-211ENST00000541562 BCL11BQ9C0K0 894 aaPredicted RBP18.35■□□□□ 0.53
VARS2-211ENST00000541562 PTPRUQ92729 1446 aa18.35■□□□□ 0.53
VARS2-211ENST00000541562 PIK3R4Q99570 1358 aa18.35■□□□□ 0.53
VARS2-211ENST00000541562 C9orf78Q9NZ63 289 aaPredicted RBP18.35■□□□□ 0.53
VARS2-211ENST00000541562 ATP7BP35670 1465 aa18.35■□□□□ 0.53
VARS2-211ENST00000541562 FAM43AQ8N2R8 423 aa18.35■□□□□ 0.53
VARS2-211ENST00000541562 TMX3Q96JJ7 454 aa18.35■□□□□ 0.53
VARS2-211ENST00000541562 MRE11P49959 708 aa18.34■□□□□ 0.53
VARS2-211ENST00000541562 CCDC8Q9H0W5 538 aaPredicted RBP18.34■□□□□ 0.53
VARS2-211ENST00000541562 NEURL4Q96JN8 1562 aa18.34■□□□□ 0.53
VARS2-211ENST00000541562 BTBD11A6QL63 1104 aa18.34■□□□□ 0.53
VARS2-211ENST00000541562 REC8O95072 547 aa18.34■□□□□ 0.53
VARS2-211ENST00000541562 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
VARS2-211ENST00000541562 USP6P35125 1406 aa18.33■□□□□ 0.53
VARS2-211ENST00000541562 A0A0G2JS52 829 aa18.33■□□□□ 0.53
VARS2-211ENST00000541562 KCNJ4P48050 445 aa18.33■□□□□ 0.53
VARS2-211ENST00000541562 CCT4P50991 539 aaKnown RBP18.33■□□□□ 0.53
VARS2-211ENST00000541562 SOS1Q07889 1333 aaPredicted RBP18.33■□□□□ 0.52
VARS2-211ENST00000541562 PLEKHG3A1L390 1219 aa18.33■□□□□ 0.52
VARS2-211ENST00000541562 CHGBP05060 677 aa18.32■□□□□ 0.52
VARS2-211ENST00000541562 CHRNA2Q15822 529 aa18.32■□□□□ 0.52
VARS2-211ENST00000541562 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
VARS2-211ENST00000541562 EDC3Q96F86 508 aaKnown RBP18.32■□□□□ 0.52
VARS2-211ENST00000541562 PHF8Q9UPP1 1060 aa18.32■□□□□ 0.52
VARS2-211ENST00000541562 ATP10DQ9P241 1426 aa18.32■□□□□ 0.52
VARS2-211ENST00000541562 SRCIN1Q9C0H9 1055 aa18.31■□□□□ 0.52
VARS2-211ENST00000541562 CDK12Q9NYV4 1490 aaPredicted RBP18.31■□□□□ 0.52
VARS2-211ENST00000541562 ZDHHC9Q9Y397 364 aa18.31■□□□□ 0.52
VARS2-211ENST00000541562 FSD2A1L4K1 749 aa18.31■□□□□ 0.52
VARS2-211ENST00000541562 COL9A3Q14050 684 aaPredicted RBP18.31■□□□□ 0.52
VARS2-211ENST00000541562 ESYT1Q9BSJ8 1104 aa18.31■□□□□ 0.52
VARS2-211ENST00000541562 NLRP2Q9NX02 1062 aa18.31■□□□□ 0.52
VARS2-211ENST00000541562 CSB-PGBD3P0DP91 1061 aa18.3■□□□□ 0.52
VARS2-211ENST00000541562 BRPF1P55201 1214 aaPredicted RBP18.3■□□□□ 0.52
VARS2-211ENST00000541562 PTPRCP08575 1304 aa18.3■□□□□ 0.52
VARS2-211ENST00000541562 DLC1Q96QB1 1528 aa18.3■□□□□ 0.52
VARS2-211ENST00000541562 FLT4P35916 1363 aa18.3■□□□□ 0.52
VARS2-211ENST00000541562 AATKQ6ZMQ8 1374 aa18.3■□□□□ 0.52
VARS2-211ENST00000541562 USP32Q8NFA0 1604 aa18.3■□□□□ 0.52
VARS2-211ENST00000541562 RGS12O14924 1447 aa18.3■□□□□ 0.52
VARS2-211ENST00000541562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.3■□□□□ 0.52
VARS2-211ENST00000541562 DLG5Q8TDM6 1919 aa18.3■□□□□ 0.52
VARS2-211ENST00000541562 CEP170BQ9Y4F5 1589 aaPredicted RBP18.29■□□□□ 0.52
VARS2-211ENST00000541562 CHMLP26374 656 aa18.29■□□□□ 0.52
VARS2-211ENST00000541562 CCDC85AQ96PX6 553 aaPredicted RBP18.29■□□□□ 0.52
VARS2-211ENST00000541562 GADD45BO75293 160 aaPredicted RBP18.29■□□□□ 0.52
VARS2-211ENST00000541562 DDIT3P35638 169 aa18.29■□□□□ 0.52
VARS2-211ENST00000541562 ANP32BQ92688 251 aaKnown RBP18.29■□□□□ 0.52
VARS2-211ENST00000541562 ADAMTS13Q76LX8 1427 aa18.29■□□□□ 0.52
VARS2-211ENST00000541562 KIF20BQ96Q89 1820 aa18.29■□□□□ 0.52
VARS2-211ENST00000541562 GNAI3P08754 354 aa18.29■□□□□ 0.52
VARS2-211ENST00000541562 STK3Q13188 491 aa18.29■□□□□ 0.52
VARS2-211ENST00000541562 FERMT3Q86UX7 667 aa18.29■□□□□ 0.52
VARS2-211ENST00000541562 THEMISQ8N1K5 641 aaPredicted RBP18.29■□□□□ 0.52
VARS2-211ENST00000541562 GPT2Q8TD30 523 aa18.29■□□□□ 0.52
VARS2-211ENST00000541562 MAP3K2Q9Y2U5 619 aa18.29■□□□□ 0.52
VARS2-211ENST00000541562 RBSNQ9H1K0 784 aa18.28■□□□□ 0.52
VARS2-211ENST00000541562 CRB1P82279 1406 aa18.28■□□□□ 0.52
VARS2-211ENST00000541562 ESPNB1AK53 854 aa18.28■□□□□ 0.52
VARS2-211ENST00000541562 ATP8B2P98198 1209 aa18.28■□□□□ 0.52
VARS2-211ENST00000541562 NECAB1Q8N987 351 aa18.28■□□□□ 0.52
VARS2-211ENST00000541562 HAP1P54257 671 aaPredicted RBP18.27■□□□□ 0.52
VARS2-211ENST00000541562 ZSCAN23Q3MJ62 389 aa18.27■□□□□ 0.52
VARS2-211ENST00000541562 FAM173BQ6P4H8 233 aa18.27■□□□□ 0.52
VARS2-211ENST00000541562 NAP1L2Q9ULW6 460 aaPredicted RBP18.27■□□□□ 0.52
VARS2-211ENST00000541562 FIBPO43427 364 aa18.27■□□□□ 0.52
VARS2-211ENST00000541562 NCBP3Q53F19 620 aaKnown RBP18.27■□□□□ 0.52
VARS2-211ENST00000541562 ATP5J2-PTCD1G3V325 749 aa18.27■□□□□ 0.51
VARS2-211ENST00000541562 PTCD1O75127 700 aaKnown RBP18.27■□□□□ 0.51
VARS2-211ENST00000541562 RASEFQ8IZ41 740 aa18.27■□□□□ 0.51
VARS2-211ENST00000541562 RHPN1Q8TCX5 695 aa18.27■□□□□ 0.51
VARS2-211ENST00000541562 BOLA2Q9H3K6 86 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms