RNA–Protein interactions for RNA: ENST00000541496.1

SPARCL1-209, Transcript of SPARC like 1, humanhuman

TSL 2

Gene SPARCL1, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-209ENST00000541496 NFAT5O94916 1531 aa6.73□□□□□ -1.33
SPARCL1-209ENST00000541496 ARHGAP33O14559 1287 aa6.73□□□□□ -1.33
SPARCL1-209ENST00000541496 CABLES1Q8TDN4 633 aa6.73□□□□□ -1.33
SPARCL1-209ENST00000541496 EPAS1Q99814 870 aa6.73□□□□□ -1.33
SPARCL1-209ENST00000541496 PIK3C2AO00443 1686 aa6.73□□□□□ -1.33
SPARCL1-209ENST00000541496 ALS2Q96Q42 1657 aa6.73□□□□□ -1.33
SPARCL1-209ENST00000541496 FLT4P35916 1363 aa6.72□□□□□ -1.33
SPARCL1-209ENST00000541496 USP54Q70EL1 1684 aa6.72□□□□□ -1.33
SPARCL1-209ENST00000541496 MTHFSP49914 203 aa6.72□□□□□ -1.33
SPARCL1-209ENST00000541496 RRS1Q15050 365 aaKnown RBP6.72□□□□□ -1.33
SPARCL1-209ENST00000541496 IP6K1Q92551 441 aa6.72□□□□□ -1.33
SPARCL1-209ENST00000541496 ZDHHC16Q969W1 377 aa6.72□□□□□ -1.33
SPARCL1-209ENST00000541496 BCL2L12Q9HB09 334 aa6.72□□□□□ -1.33
SPARCL1-209ENST00000541496 PRDM11Q9NQV5 511 aa6.72□□□□□ -1.33
SPARCL1-209ENST00000541496 COL22A1Q8NFW1 1626 aaPredicted RBP6.72□□□□□ -1.33
SPARCL1-209ENST00000541496 ABCC6O95255 1503 aa6.71□□□□□ -1.33
SPARCL1-209ENST00000541496 KIAA0232Q92628 1395 aa6.71□□□□□ -1.33
SPARCL1-209ENST00000541496 BLMP54132 1417 aaPredicted RBP6.71□□□□□ -1.34
SPARCL1-209ENST00000541496 CCER2I3L3R5 266 aa6.71□□□□□ -1.34
SPARCL1-209ENST00000541496 FBLN1P23142 703 aa6.71□□□□□ -1.34
SPARCL1-209ENST00000541496 HOXC9P31274 260 aa6.71□□□□□ -1.34
SPARCL1-209ENST00000541496 TNNT2P45379 298 aaPredicted RBP6.71□□□□□ -1.34
SPARCL1-209ENST00000541496 AMPHP49418 695 aa6.71□□□□□ -1.34
SPARCL1-209ENST00000541496 ZC3H6P61129 1189 aaKnown RBP6.71□□□□□ -1.34
SPARCL1-209ENST00000541496 TYW1BQ6NUM6 668 aa6.71□□□□□ -1.34
SPARCL1-209ENST00000541496 EMILIN1Q9Y6C2 1016 aa6.71□□□□□ -1.34
SPARCL1-209ENST00000541496 CDK12Q9NYV4 1490 aaPredicted RBP6.71□□□□□ -1.34
SPARCL1-209ENST00000541496 RGPD8O14715 1765 aaPredicted RBP6.7□□□□□ -1.34
SPARCL1-209ENST00000541496 FAM83GA6ND36 823 aa6.7□□□□□ -1.34
SPARCL1-209ENST00000541496 POTEEQ6S8J3 1075 aa6.7□□□□□ -1.34
SPARCL1-209ENST00000541496 FNBP4Q8N3X1 1017 aaPredicted RBP6.7□□□□□ -1.34
SPARCL1-209ENST00000541496 KCNV2Q8TDN2 545 aa6.7□□□□□ -1.34
SPARCL1-209ENST00000541496 CFAP53Q96M91 514 aa6.7□□□□□ -1.34
SPARCL1-209ENST00000541496 PHLPP1O60346 1717 aa6.7□□□□□ -1.34
SPARCL1-209ENST00000541496 NUTM2BA6NNL0 878 aaPredicted RBP6.69□□□□□ -1.34
SPARCL1-209ENST00000541496 NUTM2EB1AL46 878 aaPredicted RBP6.69□□□□□ -1.34
SPARCL1-209ENST00000541496 PTPREP23469 700 aa6.69□□□□□ -1.34
SPARCL1-209ENST00000541496 IL13P35225 146 aa6.69□□□□□ -1.34
SPARCL1-209ENST00000541496 CNGB1Q14028 1251 aaPredicted RBP6.69□□□□□ -1.34
SPARCL1-209ENST00000541496 HSP90AB2PQ58FF8 381 aa6.69□□□□□ -1.34
SPARCL1-209ENST00000541496 NUTM2AQ8IVF1 878 aaPredicted RBP6.69□□□□□ -1.34
SPARCL1-209ENST00000541496 PCDHGA10Q9Y5H3 936 aa6.69□□□□□ -1.34
SPARCL1-209ENST00000541496 LRP6O75581 1613 aa6.68□□□□□ -1.34
SPARCL1-209ENST00000541496 SHPRHQ149N8 1683 aa6.68□□□□□ -1.34
SPARCL1-209ENST00000541496 COL3A1P02461 1466 aaPredicted RBP6.68□□□□□ -1.34
SPARCL1-209ENST00000541496 SLIT2O94813 1529 aa6.68□□□□□ -1.34
SPARCL1-209ENST00000541496 TK2O00142 265 aa6.68□□□□□ -1.34
SPARCL1-209ENST00000541496 PPM1GO15355 546 aaPredicted RBP6.68□□□□□ -1.34
SPARCL1-209ENST00000541496 DIAPH1O60610 1272 aaKnown RBP6.68□□□□□ -1.34
SPARCL1-209ENST00000541496 ADAMTS2O95450 1211 aa6.68□□□□□ -1.34
SPARCL1-209ENST00000541496 EIF4A2Q14240 407 aaKnown RBP6.68□□□□□ -1.34
SPARCL1-209ENST00000541496 CHRNA2Q15822 529 aa6.68□□□□□ -1.34
SPARCL1-209ENST00000541496 UNC5CLQ8IV45 518 aa6.67□□□□□ -1.34
SPARCL1-209ENST00000541496 PNISRQ8TF01 805 aaKnown RBP6.67□□□□□ -1.34
SPARCL1-209ENST00000541496 ANKRD24Q8TF21 1146 aa6.67□□□□□ -1.34
SPARCL1-209ENST00000541496 SLC4A5Q9BY07 1137 aa6.67□□□□□ -1.34
SPARCL1-209ENST00000541496 MRS2Q9HD23 443 aa6.67□□□□□ -1.34
SPARCL1-209ENST00000541496 BTG4Q9NY30 223 aa6.67□□□□□ -1.34
SPARCL1-209ENST00000541496 NUDCQ9Y266 331 aa6.67□□□□□ -1.34
SPARCL1-209ENST00000541496 PHRF1Q9P1Y6 1649 aaKnown RBP6.67□□□□□ -1.34
SPARCL1-209ENST00000541496 WDR17Q8IZU2 1322 aa6.67□□□□□ -1.34
SPARCL1-209ENST00000541496 IGSF1Q8N6C5 1336 aa6.67□□□□□ -1.34
SPARCL1-209ENST00000541496 PLEKHG2Q9H7P9 1386 aa6.67□□□□□ -1.34
SPARCL1-209ENST00000541496 NCAPD2Q15021 1401 aa6.67□□□□□ -1.34
SPARCL1-209ENST00000541496 COL5A2P05997 1499 aaPredicted RBP6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 CAMTA1Q9Y6Y1 1673 aa6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 CCDC184Q52MB2 194 aa6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 MEX3CQ5U5Q3 659 aaKnown RBP6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 ADGRD1Q6QNK2 874 aa6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 DDX12PQ92771 950 aa6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 NGLY1Q96IV0 654 aa6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 C8orf37Q96NL8 207 aa6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 KCNK17Q96T54 332 aa6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 CARD10Q9BWT7 1032 aa6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 ADAM33Q9BZ11 813 aa6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 MARF1Q9Y4F3 1742 aaKnown RBP6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 CRYBG1Q9Y4K1 1723 aa6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 KDRP35968 1356 aa6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 BCL9LQ86UU0 1499 aa6.66□□□□□ -1.34
SPARCL1-209ENST00000541496 ANKRD26Q9UPS8 1709 aa6.65□□□□□ -1.34
SPARCL1-209ENST00000541496 KIF20BQ96Q89 1820 aa6.65□□□□□ -1.34
SPARCL1-209ENST00000541496 ZBTB7CA1YPR0 619 aa6.65□□□□□ -1.34
SPARCL1-209ENST00000541496 FCHSD2O94868 740 aa6.65□□□□□ -1.34
SPARCL1-209ENST00000541496 PSEN2P49810 448 aa6.65□□□□□ -1.34
SPARCL1-209ENST00000541496 EVA1CP58658 441 aa6.65□□□□□ -1.34
SPARCL1-209ENST00000541496 NBR1Q14596 966 aa6.65□□□□□ -1.34
SPARCL1-209ENST00000541496 VPS72Q15906 364 aa6.65□□□□□ -1.34
SPARCL1-209ENST00000541496 NBPF6Q5VWK0 638 aa6.65□□□□□ -1.34
SPARCL1-209ENST00000541496 NBPF4Q96M43 638 aa6.65□□□□□ -1.34
SPARCL1-209ENST00000541496 EYA1Q99502 592 aa6.65□□□□□ -1.34
SPARCL1-209ENST00000541496 CRB1P82279 1406 aa6.65□□□□□ -1.35
SPARCL1-209ENST00000541496 LMO7Q8WWI1 1683 aa6.65□□□□□ -1.35
SPARCL1-209ENST00000541496 PPP1R3GB7ZBB8 358 aa6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 CSB-PGBD3P0DP91 1061 aa6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 EN1Q05925 392 aaPredicted RBP6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 WDR43Q15061 677 aaKnown RBP eCLIP6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 DMRTA1Q5VZB9 504 aa6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 ZNF772Q68DY9 489 aaPredicted RBP6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 LARP1Q6PKG0 1096 aaKnown RBP6.64□□□□□ -1.35
SPARCL1-209ENST00000541496 TOM1L2Q6ZVM7 507 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms