RNA–Protein interactions for RNA: ENST00000541189.5

MSRB3-210, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-210ENST00000541189 MRC1P22897 1456 aa18.24■□□□□ 0.51
MSRB3-210ENST00000541189 ADAMTS7Q9UKP4 1686 aa18.24■□□□□ 0.51
MSRB3-210ENST00000541189 EP400Q96L91 3159 aa18.24■□□□□ 0.51
MSRB3-210ENST00000541189 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
MSRB3-210ENST00000541189 CALD1Q05682 793 aaKnown RBP18.23■□□□□ 0.51
MSRB3-210ENST00000541189 EN1Q05925 392 aaPredicted RBP18.23■□□□□ 0.51
MSRB3-210ENST00000541189 WWC1Q8IX03 1113 aa18.23■□□□□ 0.51
MSRB3-210ENST00000541189 SENP3-EIF4A1A0A087X0R7 540 aa18.22■□□□□ 0.51
MSRB3-210ENST00000541189 BABAM1Q9NWV8 329 aa18.22■□□□□ 0.51
MSRB3-210ENST00000541189 DOT1LQ8TEK3 1739 aa18.22■□□□□ 0.51
MSRB3-210ENST00000541189 TOGARAM1Q9Y4F4 1720 aa18.22■□□□□ 0.51
MSRB3-210ENST00000541189 SBF2Q86WG5 1849 aa18.21■□□□□ 0.51
MSRB3-210ENST00000541189 PALLDQ8WX93 1383 aa18.21■□□□□ 0.51
MSRB3-210ENST00000541189 PROM2Q8N271 834 aa18.21■□□□□ 0.51
MSRB3-210ENST00000541189 SLC39A6Q13433 755 aa18.2■□□□□ 0.5
MSRB3-210ENST00000541189 EZH2Q15910 746 aaKnown RBP18.2■□□□□ 0.5
MSRB3-210ENST00000541189 TXNRD1Q16881 649 aa18.2■□□□□ 0.5
MSRB3-210ENST00000541189 SLC27A3Q5K4L6 730 aa18.2■□□□□ 0.5
MSRB3-210ENST00000541189 ZNF790Q6PG37 636 aa18.2■□□□□ 0.5
MSRB3-210ENST00000541189 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
MSRB3-210ENST00000541189 SCN11AQ9UI33 1791 aa18.19■□□□□ 0.5
MSRB3-210ENST00000541189 CHL1O00533 1208 aa18.19■□□□□ 0.5
MSRB3-210ENST00000541189 WDR63Q8IWG1 891 aa18.19■□□□□ 0.5
MSRB3-210ENST00000541189 TTC5Q8N0Z6 440 aa18.19■□□□□ 0.5
MSRB3-210ENST00000541189 LOC102724428A0A0B4J2F2 783 aa18.18■□□□□ 0.5
MSRB3-210ENST00000541189 HMGB2P26583 209 aaKnown RBP18.18■□□□□ 0.5
MSRB3-210ENST00000541189 SIK1P57059 783 aa18.18■□□□□ 0.5
MSRB3-210ENST00000541189 CFAP44Q96MT7 982 aa18.18■□□□□ 0.5
MSRB3-210ENST00000541189 MIS18AQ9NYP9 233 aa18.18■□□□□ 0.5
MSRB3-210ENST00000541189 PTCD1O75127 700 aaKnown RBP18.17■□□□□ 0.5
MSRB3-210ENST00000541189 ZNF853P0CG23 659 aa18.17■□□□□ 0.5
MSRB3-210ENST00000541189 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
MSRB3-210ENST00000541189 IFT57Q9NWB7 429 aa18.17■□□□□ 0.5
MSRB3-210ENST00000541189 CCNL1Q9UK58 526 aaPredicted RBP18.17■□□□□ 0.5
MSRB3-210ENST00000541189 TNS1Q9HBL0 1735 aaKnown RBP18.17■□□□□ 0.5
MSRB3-210ENST00000541189 IL16Q14005 1332 aa18.17■□□□□ 0.5
MSRB3-210ENST00000541189 KCNQ3O43525 872 aa18.16■□□□□ 0.5
MSRB3-210ENST00000541189 GNAI1P63096 354 aa18.16■□□□□ 0.5
MSRB3-210ENST00000541189 LRRC4BQ9NT99 713 aa18.16■□□□□ 0.5
MSRB3-210ENST00000541189 TSPYL4Q9UJ04 414 aa18.16■□□□□ 0.5
MSRB3-210ENST00000541189 BTAF1O14981 1849 aa18.16■□□□□ 0.5
MSRB3-210ENST00000541189 ITGB4P16144 1822 aa18.15■□□□□ 0.5
MSRB3-210ENST00000541189 VSIG10Q8N0Z9 540 aa18.15■□□□□ 0.5
MSRB3-210ENST00000541189 ZNF496Q96IT1 587 aaPredicted RBP18.15■□□□□ 0.5
MSRB3-210ENST00000541189 FMNL2Q96PY5 1086 aa18.15■□□□□ 0.5
MSRB3-210ENST00000541189 SLC4A9Q96Q91 983 aa18.15■□□□□ 0.5
MSRB3-210ENST00000541189 LAS1LQ9Y4W2 734 aaKnown RBP18.15■□□□□ 0.5
MSRB3-210ENST00000541189 ZNF521Q96K83 1311 aa18.15■□□□□ 0.5
MSRB3-210ENST00000541189 ATP6V1AP38606 617 aa18.14■□□□□ 0.49
MSRB3-210ENST00000541189 KAT6BQ8WYB5 2073 aa18.14■□□□□ 0.49
MSRB3-210ENST00000541189 DLG5Q8TDM6 1919 aa18.13■□□□□ 0.49
MSRB3-210ENST00000541189 KCNQ4P56696 695 aa18.13■□□□□ 0.49
MSRB3-210ENST00000541189 EIF4A1P60842 406 aaKnown RBP18.13■□□□□ 0.49
MSRB3-210ENST00000541189 HNRNPUQ00839 825 aaKnown RBP eCLIP18.12■□□□□ 0.49
MSRB3-210ENST00000541189 ITPK1Q13572 414 aa18.12■□□□□ 0.49
MSRB3-210ENST00000541189 TEX13AQ9BXU3 409 aaPredicted RBP18.12■□□□□ 0.49
MSRB3-210ENST00000541189 MBIPQ9NS73 344 aa18.12■□□□□ 0.49
MSRB3-210ENST00000541189 HEG1Q9ULI3 1381 aa18.11■□□□□ 0.49
MSRB3-210ENST00000541189 KCPQ6ZWJ8 1503 aa18.1■□□□□ 0.49
MSRB3-210ENST00000541189 SNRPA1P09661 255 aaKnown RBP18.1■□□□□ 0.49
MSRB3-210ENST00000541189 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
MSRB3-210ENST00000541189 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
MSRB3-210ENST00000541189 NBPF14Q5TI25 921 aa18.09■□□□□ 0.49
MSRB3-210ENST00000541189 DNAJC10Q8IXB1 793 aa18.09■□□□□ 0.49
MSRB3-210ENST00000541189 RGPD3A6NKT7 1758 aaPredicted RBP18.09■□□□□ 0.49
MSRB3-210ENST00000541189 RGPD4Q7Z3J3 1758 aa18.09■□□□□ 0.49
MSRB3-210ENST00000541189 GIGYF1O75420 1035 aaPredicted RBP18.08■□□□□ 0.48
MSRB3-210ENST00000541189 LINC00116Q8NCU8 138 aa18.08■□□□□ 0.48
MSRB3-210ENST00000541189 MYH16Q9H6N6 1097 aa18.08■□□□□ 0.48
MSRB3-210ENST00000541189 STARD3NLO95772 234 aa18.07■□□□□ 0.48
MSRB3-210ENST00000541189 RC3H1Q5TC82 1133 aaKnown RBP18.07■□□□□ 0.48
MSRB3-210ENST00000541189 SPINK5Q9NQ38 1064 aaPredicted RBP18.07■□□□□ 0.48
MSRB3-210ENST00000541189 PAPPAQ13219 1627 aa18.07■□□□□ 0.48
MSRB3-210ENST00000541189 E9PSI1 815 aa18.06■□□□□ 0.48
MSRB3-210ENST00000541189 CYP19A1P11511 503 aaPredicted RBP18.06■□□□□ 0.48
MSRB3-210ENST00000541189 TSR2Q969E8 191 aaKnown RBP18.06■□□□□ 0.48
MSRB3-210ENST00000541189 AKT1S1Q96B36 256 aa18.06■□□□□ 0.48
MSRB3-210ENST00000541189 STK32BQ9NY57 414 aa18.06■□□□□ 0.48
MSRB3-210ENST00000541189 LY75O60449 1722 aa18.06■□□□□ 0.48
MSRB3-210ENST00000541189 SLFN5Q08AF3 891 aa18.05■□□□□ 0.48
MSRB3-210ENST00000541189 SLC15A2Q16348 729 aa18.05■□□□□ 0.48
MSRB3-210ENST00000541189 USP16Q9Y5T5 823 aa18.05■□□□□ 0.48
MSRB3-210ENST00000541189 CNTNAP4Q9C0A0 1308 aa18.04■□□□□ 0.48
MSRB3-210ENST00000541189 FANCIQ9NVI1 1328 aa18.04■□□□□ 0.48
MSRB3-210ENST00000541189 PRAMEF22A3QJZ6 481 aa18.04■□□□□ 0.48
MSRB3-210ENST00000541189 HOXB7P09629 217 aa18.04■□□□□ 0.48
MSRB3-210ENST00000541189 CRKLP46109 303 aaKnown RBP18.04■□□□□ 0.48
MSRB3-210ENST00000541189 ANO8Q9HCE9 1232 aaPredicted RBP18.04■□□□□ 0.48
MSRB3-210ENST00000541189 VIRMAQ69YN4 1812 aaKnown RBP18.04■□□□□ 0.48
MSRB3-210ENST00000541189 ZBED9Q6R2W3 1325 aa18.03■□□□□ 0.48
MSRB3-210ENST00000541189 ZNF831Q5JPB2 1677 aa18.03■□□□□ 0.48
MSRB3-210ENST00000541189 ZNF827Q17R98 1081 aa18.03■□□□□ 0.48
MSRB3-210ENST00000541189 KRT24Q2M2I5 525 aa18.03■□□□□ 0.48
MSRB3-210ENST00000541189 DUSP27Q5VZP5 1158 aa18.03■□□□□ 0.48
MSRB3-210ENST00000541189 INTS5Q6P9B9 1019 aaKnown RBP18.03■□□□□ 0.48
MSRB3-210ENST00000541189 TRMT2AQ8IZ69 625 aaKnown RBP18.03■□□□□ 0.48
MSRB3-210ENST00000541189 C8orf58Q8NAV2 365 aa18.03■□□□□ 0.48
MSRB3-210ENST00000541189 AK7Q96M32 723 aa18.03■□□□□ 0.48
MSRB3-210ENST00000541189 CCDC87Q9NVE4 849 aa18.03■□□□□ 0.48
MSRB3-210ENST00000541189 SOS1Q07889 1333 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms