RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 KLHL10Q6JEL2 608 aa11.67□□□□□ -0.54
TRERF1-205ENST00000541110 VPS36Q86VN1 386 aa11.67□□□□□ -0.54
TRERF1-205ENST00000541110 THEMISQ8N1K5 641 aaPredicted RBP11.67□□□□□ -0.54
TRERF1-205ENST00000541110 CTNNA3Q9UI47 895 aa11.67□□□□□ -0.54
TRERF1-205ENST00000541110 FKBP15Q5T1M5 1219 aa11.67□□□□□ -0.54
TRERF1-205ENST00000541110 MPRIPQ6WCQ1 1025 aa11.67□□□□□ -0.54
TRERF1-205ENST00000541110 ZNF710Q8N1W2 664 aa11.67□□□□□ -0.54
TRERF1-205ENST00000541110 MMRN2Q9H8L6 949 aa11.67□□□□□ -0.54
TRERF1-205ENST00000541110 RANBP6O60518 1105 aaKnown RBP11.66□□□□□ -0.54
TRERF1-205ENST00000541110 SULT6B1Q6IMI4 303 aa11.66□□□□□ -0.54
TRERF1-205ENST00000541110 SLF2Q8IX21 1173 aa11.66□□□□□ -0.54
TRERF1-205ENST00000541110 RRBP1Q9P2E9 1410 aaKnown RBP11.66□□□□□ -0.54
TRERF1-205ENST00000541110 NLRP5P59047 1200 aa11.66□□□□□ -0.54
TRERF1-205ENST00000541110 UQCRHP07919 91 aa11.66□□□□□ -0.54
TRERF1-205ENST00000541110 TMEM266Q2M3C6 531 aa11.66□□□□□ -0.54
TRERF1-205ENST00000541110 UQCRHLA0A096LP55 91 aa11.66□□□□□ -0.54
TRERF1-205ENST00000541110 MCM2P49736 904 aa11.66□□□□□ -0.54
TRERF1-205ENST00000541110 TWISTNBQ3B726 338 aaPredicted RBP11.66□□□□□ -0.54
TRERF1-205ENST00000541110 MPNDQ8N594 471 aa11.66□□□□□ -0.54
TRERF1-205ENST00000541110 NOB1Q9ULX3 412 aaKnown RBP11.66□□□□□ -0.54
TRERF1-205ENST00000541110 KIF20AO95235 890 aa11.66□□□□□ -0.54
TRERF1-205ENST00000541110 CNTLNQ9NXG0 1405 aa11.66□□□□□ -0.54
TRERF1-205ENST00000541110 PRKAR2BP31323 418 aa11.66□□□□□ -0.54
TRERF1-205ENST00000541110 ANKLE2Q86XL3 938 aa11.66□□□□□ -0.54
TRERF1-205ENST00000541110 GCOM1H8Y6P7 765 aaPredicted RBP11.65□□□□□ -0.54
TRERF1-205ENST00000541110 MYZAPP0CAP1 466 aa11.65□□□□□ -0.54
TRERF1-205ENST00000541110 PRAM1Q96QH2 718 aa11.65□□□□□ -0.54
TRERF1-205ENST00000541110 VAT1LQ9HCJ6 419 aa11.65□□□□□ -0.54
TRERF1-205ENST00000541110 BAG4O95429 457 aaKnown RBP11.65□□□□□ -0.54
TRERF1-205ENST00000541110 APBB1IPQ7Z5R6 666 aaPredicted RBP11.65□□□□□ -0.54
TRERF1-205ENST00000541110 SPATA24Q86W54 205 aa11.65□□□□□ -0.54
TRERF1-205ENST00000541110 WWC3Q9ULE0 1092 aa11.65□□□□□ -0.54
TRERF1-205ENST00000541110 SPATA32Q96LK8 384 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 BLOC1S2Q6QNY1 142 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 DPH6Q7L8W6 267 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 PNISRQ8TF01 805 aaKnown RBP11.64□□□□□ -0.55
TRERF1-205ENST00000541110 SLU7O95391 586 aaKnown RBP11.64□□□□□ -0.55
TRERF1-205ENST00000541110 FGFR1OPO95684 399 aaKnown RBP11.64□□□□□ -0.55
TRERF1-205ENST00000541110 CCDC82Q8N4S0 544 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 RAB34Q9BZG1 259 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 PRC1O43663 620 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 CCT4P50991 539 aaKnown RBP11.64□□□□□ -0.55
TRERF1-205ENST00000541110 KRT85P78386 507 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 VPS8Q8N3P4 1428 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 LUZP1Q86V48 1076 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 PPP1R14CQ8TAE6 165 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 TIGD1Q96MW7 591 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 DDX11Q96FC9 970 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 ODF2LQ9ULJ1 636 aa11.64□□□□□ -0.55
TRERF1-205ENST00000541110 PRPF4BQ13523 1007 aaKnown RBP11.63□□□□□ -0.55
TRERF1-205ENST00000541110 TICAM2Q86XR7 235 aa11.63□□□□□ -0.55
TRERF1-205ENST00000541110 NAPBQ9H115 298 aa11.63□□□□□ -0.55
TRERF1-205ENST00000541110 BIRC2Q13490 618 aa11.63□□□□□ -0.55
TRERF1-205ENST00000541110 CDK19Q9BWU1 502 aa11.63□□□□□ -0.55
TRERF1-205ENST00000541110 BCAR3O75815 825 aa11.63□□□□□ -0.55
TRERF1-205ENST00000541110 PDRG1Q9NUG6 133 aa11.63□□□□□ -0.55
TRERF1-205ENST00000541110 CETN1Q12798 172 aa11.63□□□□□ -0.55
TRERF1-205ENST00000541110 ARHGAP29Q52LW3 1261 aa11.63□□□□□ -0.55
TRERF1-205ENST00000541110 JAKMIP1Q96N16 626 aaKnown RBP11.63□□□□□ -0.55
TRERF1-205ENST00000541110 BMS1Q14692 1282 aaKnown RBP11.63□□□□□ -0.55
TRERF1-205ENST00000541110 SMTNL1A8MU46 457 aa11.63□□□□□ -0.55
TRERF1-205ENST00000541110 IFIT1P09914 478 aaKnown RBP11.63□□□□□ -0.55
TRERF1-205ENST00000541110 CFAP100Q494V2 611 aa11.63□□□□□ -0.55
TRERF1-205ENST00000541110 CFAP57Q96MR6 1250 aa11.63□□□□□ -0.55
TRERF1-205ENST00000541110 SRGAP3O43295 1099 aa11.62□□□□□ -0.55
TRERF1-205ENST00000541110 RFC4P35249 363 aa11.62□□□□□ -0.55
TRERF1-205ENST00000541110 ST5P78524 1137 aa11.62□□□□□ -0.55
TRERF1-205ENST00000541110 MBD3O95983 291 aa11.62□□□□□ -0.55
TRERF1-205ENST00000541110 UPF3BQ9BZI7 483 aaKnown RBP11.62□□□□□ -0.55
TRERF1-205ENST00000541110 CABP5Q9NP86 173 aa11.62□□□□□ -0.55
TRERF1-205ENST00000541110 AKAP2Q9Y2D5 859 aa11.62□□□□□ -0.55
TRERF1-205ENST00000541110 CASQ1P31415 396 aa11.62□□□□□ -0.55
TRERF1-205ENST00000541110 TCERG1LQ5VWI1 586 aa11.62□□□□□ -0.55
TRERF1-205ENST00000541110 ATP2B3Q16720 1220 aa11.62□□□□□ -0.55
TRERF1-205ENST00000541110 ATF7IPQ6VMQ6 1270 aa11.62□□□□□ -0.55
TRERF1-205ENST00000541110 NDC80O14777 642 aa11.61□□□□□ -0.55
TRERF1-205ENST00000541110 TDRD12Q587J7 1177 aaKnown RBP11.61□□□□□ -0.55
TRERF1-205ENST00000541110 TAOK3Q9H2K8 898 aa11.61□□□□□ -0.55
TRERF1-205ENST00000541110 IKBKGQ9Y6K9 419 aa11.61□□□□□ -0.55
TRERF1-205ENST00000541110 SLC5A1P13866 664 aa11.61□□□□□ -0.55
TRERF1-205ENST00000541110 SREK1Q8WXA9 508 aaKnown RBP11.61□□□□□ -0.55
TRERF1-205ENST00000541110 SRCIN1Q9C0H9 1055 aa11.61□□□□□ -0.55
TRERF1-205ENST00000541110 RBM10P98175 930 aaKnown RBP11.61□□□□□ -0.55
TRERF1-205ENST00000541110 NCBP1Q09161 790 aaKnown RBP11.61□□□□□ -0.55
TRERF1-205ENST00000541110 TMCO3Q6UWJ1 677 aa11.61□□□□□ -0.55
TRERF1-205ENST00000541110 FAM212AQ96EL1 285 aa11.61□□□□□ -0.55
TRERF1-205ENST00000541110 CRACR2AQ9BSW2 395 aa11.61□□□□□ -0.55
TRERF1-205ENST00000541110 TMX1Q9H3N1 280 aa11.61□□□□□ -0.55
TRERF1-205ENST00000541110 IQCA1Q86XH1 822 aa11.61□□□□□ -0.55
TRERF1-205ENST00000541110 PRKCSHP14314 528 aaPredicted RBP11.61□□□□□ -0.55
TRERF1-205ENST00000541110 CTCFLQ8NI51 663 aaPredicted RBP11.61□□□□□ -0.55
TRERF1-205ENST00000541110 A0A087WZG4 1122 aa11.6□□□□□ -0.55
TRERF1-205ENST00000541110 FSD2A1L4K1 749 aa11.6□□□□□ -0.55
TRERF1-205ENST00000541110 PSMC4P43686 418 aa11.6□□□□□ -0.55
TRERF1-205ENST00000541110 SIRT1Q96EB6 747 aa11.6□□□□□ -0.55
TRERF1-205ENST00000541110 TTC21AQ8NDW8 1320 aa11.6□□□□□ -0.55
TRERF1-205ENST00000541110 CASTP20810 708 aaKnown RBP11.6□□□□□ -0.55
TRERF1-205ENST00000541110 CCDC174Q6PII3 467 aa11.6□□□□□ -0.55
TRERF1-205ENST00000541110 TRAK2O60296 914 aa11.6□□□□□ -0.55
TRERF1-205ENST00000541110 ACTN2P35609 894 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms