RNA–Protein interactions for RNA: ENST00000541042.5

C1R-208, Transcript of complement C1r, humanhuman

TSL 5

Gene C1R, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1R-208ENST00000541042 RGPD4Q7Z3J3 1758 aa13.65□□□□□ -0.22
C1R-208ENST00000541042 NUP188Q5SRE5 1749 aa13.64□□□□□ -0.23
C1R-208ENST00000541042 ITPK1Q13572 414 aa13.64□□□□□ -0.23
C1R-208ENST00000541042 DCTN1Q14203 1278 aa13.64□□□□□ -0.23
C1R-208ENST00000541042 SLC39A6Q13433 755 aa13.63□□□□□ -0.23
C1R-208ENST00000541042 MCM10Q7L590 875 aa13.63□□□□□ -0.23
C1R-208ENST00000541042 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
C1R-208ENST00000541042 STK32BQ9NY57 414 aa13.63□□□□□ -0.23
C1R-208ENST00000541042 CEMIPQ8WUJ3 1361 aa13.62□□□□□ -0.23
C1R-208ENST00000541042 NFE2L2Q16236 605 aa13.62□□□□□ -0.23
C1R-208ENST00000541042 PNNQ9H307 717 aaKnown RBP13.62□□□□□ -0.23
C1R-208ENST00000541042 HTATSF1O43719 755 aaKnown RBP13.61□□□□□ -0.23
C1R-208ENST00000541042 PTCD1O75127 700 aaKnown RBP13.61□□□□□ -0.23
C1R-208ENST00000541042 ATP6V1AP38606 617 aa13.61□□□□□ -0.23
C1R-208ENST00000541042 WDR43Q15061 677 aaKnown RBP eCLIP13.61□□□□□ -0.23
C1R-208ENST00000541042 AMIGO3Q86WK7 504 aa13.61□□□□□ -0.23
C1R-208ENST00000541042 LINC00116Q8NCU8 138 aa13.61□□□□□ -0.23
C1R-208ENST00000541042 PNISRQ8TF01 805 aaKnown RBP13.61□□□□□ -0.23
C1R-208ENST00000541042 RBM42Q9BTD8 480 aaKnown RBP13.61□□□□□ -0.23
C1R-208ENST00000541042 LY75O60449 1722 aa13.61□□□□□ -0.23
C1R-208ENST00000541042 ADAMTS7Q9UKP4 1686 aa13.6□□□□□ -0.23
C1R-208ENST00000541042 KCNQ3O43525 872 aa13.6□□□□□ -0.23
C1R-208ENST00000541042 SMIM5Q71RC9 77 aa13.6□□□□□ -0.23
C1R-208ENST00000541042 SCN11AQ9UI33 1791 aa13.6□□□□□ -0.23
C1R-208ENST00000541042 PAPPAQ13219 1627 aa13.6□□□□□ -0.23
C1R-208ENST00000541042 NEFMP07197 916 aa13.59□□□□□ -0.23
C1R-208ENST00000541042 TMPOP42166 694 aaKnown RBP13.59□□□□□ -0.23
C1R-208ENST00000541042 TEFQ10587 303 aa13.59□□□□□ -0.23
C1R-208ENST00000541042 RTF1Q92541 710 aaKnown RBP13.59□□□□□ -0.23
C1R-208ENST00000541042 RUNDC1Q96C34 613 aa13.59□□□□□ -0.23
C1R-208ENST00000541042 THUMPD2Q9BTF0 503 aaKnown RBP13.59□□□□□ -0.23
C1R-208ENST00000541042 TFCP2L1Q9NZI6 479 aa13.59□□□□□ -0.23
C1R-208ENST00000541042 RRP7AQ9Y3A4 280 aaKnown RBP13.59□□□□□ -0.23
C1R-208ENST00000541042 MRC1P22897 1456 aa13.59□□□□□ -0.23
C1R-208ENST00000541042 MAPK8IP3Q9UPT6 1336 aa13.59□□□□□ -0.23
C1R-208ENST00000541042 RIPK4P57078 832 aa13.58□□□□□ -0.24
C1R-208ENST00000541042 MRS2Q9HD23 443 aa13.58□□□□□ -0.24
C1R-208ENST00000541042 PNPLA7Q6ZV29 1317 aa13.58□□□□□ -0.24
C1R-208ENST00000541042 ZNF790Q6PG37 636 aa13.57□□□□□ -0.24
C1R-208ENST00000541042 COL23A1Q86Y22 540 aaPredicted RBP13.57□□□□□ -0.24
C1R-208ENST00000541042 ZNF496Q96IT1 587 aaPredicted RBP13.57□□□□□ -0.24
C1R-208ENST00000541042 MIS18AQ9NYP9 233 aa13.57□□□□□ -0.24
C1R-208ENST00000541042 BTBD11A6QL63 1104 aa13.56□□□□□ -0.24
C1R-208ENST00000541042 ZBTB7AO95365 584 aa13.56□□□□□ -0.24
C1R-208ENST00000541042 TAF7Q15545 349 aaPredicted RBP13.56□□□□□ -0.24
C1R-208ENST00000541042 NEUROD2Q15784 382 aa13.56□□□□□ -0.24
C1R-208ENST00000541042 DNAJC10Q8IXB1 793 aa13.56□□□□□ -0.24
C1R-208ENST00000541042 TRIM35Q9UPQ4 493 aa13.56□□□□□ -0.24
C1R-208ENST00000541042 APAF1O14727 1248 aa13.55□□□□□ -0.24
C1R-208ENST00000541042 RC3H1Q5TC82 1133 aaKnown RBP13.55□□□□□ -0.24
C1R-208ENST00000541042 ATF5Q9Y2D1 282 aaPredicted RBP13.55□□□□□ -0.24
C1R-208ENST00000541042 HMGB2P26583 209 aaKnown RBP13.54□□□□□ -0.24
C1R-208ENST00000541042 INTS5Q6P9B9 1019 aaKnown RBP13.54□□□□□ -0.24
C1R-208ENST00000541042 KCPQ6ZWJ8 1503 aa13.54□□□□□ -0.24
C1R-208ENST00000541042 CYP19A1P11511 503 aaPredicted RBP13.53□□□□□ -0.24
C1R-208ENST00000541042 CRKLP46109 303 aaKnown RBP13.53□□□□□ -0.24
C1R-208ENST00000541042 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
C1R-208ENST00000541042 VSIG10Q8N0Z9 540 aa13.53□□□□□ -0.24
C1R-208ENST00000541042 AK7Q96M32 723 aa13.53□□□□□ -0.24
C1R-208ENST00000541042 SENP3-EIF4A1A0A087X0R7 540 aa13.52□□□□□ -0.25
C1R-208ENST00000541042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.52□□□□□ -0.25
C1R-208ENST00000541042 PRAMEF22A3QJZ6 481 aa13.52□□□□□ -0.25
C1R-208ENST00000541042 GNPATO15228 680 aa13.52□□□□□ -0.25
C1R-208ENST00000541042 RPS6KA4O75676 772 aa13.52□□□□□ -0.25
C1R-208ENST00000541042 PTGER2P43116 358 aa13.52□□□□□ -0.25
C1R-208ENST00000541042 SGIP1Q9BQI5 828 aa13.52□□□□□ -0.25
C1R-208ENST00000541042 SPON1Q9HCB6 807 aa13.52□□□□□ -0.25
C1R-208ENST00000541042 CNTNAP4Q9C0A0 1308 aa13.52□□□□□ -0.25
C1R-208ENST00000541042 TAF1LQ8IZX4 1826 aa13.52□□□□□ -0.25
C1R-208ENST00000541042 VIRMAQ69YN4 1812 aaKnown RBP13.51□□□□□ -0.25
C1R-208ENST00000541042 C4BP0C0L5 1744 aa13.51□□□□□ -0.25
C1R-208ENST00000541042 HEG1Q9ULI3 1381 aa13.51□□□□□ -0.25
C1R-208ENST00000541042 PHF14O94880 888 aa13.51□□□□□ -0.25
C1R-208ENST00000541042 SLC16A10Q8TF71 515 aa13.51□□□□□ -0.25
C1R-208ENST00000541042 FMNL2Q96PY5 1086 aa13.51□□□□□ -0.25
C1R-208ENST00000541042 MTFR1LQ9H019 292 aa13.51□□□□□ -0.25
C1R-208ENST00000541042 DLG5Q8TDM6 1919 aa13.51□□□□□ -0.25
C1R-208ENST00000541042 SIPA1L3O60292 1781 aaPredicted RBP13.5□□□□□ -0.25
C1R-208ENST00000541042 CASZ1Q86V15 1759 aa13.5□□□□□ -0.25
C1R-208ENST00000541042 C5P01031 1676 aa13.5□□□□□ -0.25
C1R-208ENST00000541042 MSH5O43196 834 aa13.5□□□□□ -0.25
C1R-208ENST00000541042 SSFA2P28290 1259 aa13.5□□□□□ -0.25
C1R-208ENST00000541042 FLAD1Q8NFF5 587 aa13.5□□□□□ -0.25
C1R-208ENST00000541042 ARHGEF1Q92888 912 aaKnown RBP13.5□□□□□ -0.25
C1R-208ENST00000541042 RTCBQ9Y3I0 505 aaKnown RBP13.5□□□□□ -0.25
C1R-208ENST00000541042 USP16Q9Y5T5 823 aa13.5□□□□□ -0.25
C1R-208ENST00000541042 ZNF831Q5JPB2 1677 aa13.5□□□□□ -0.25
C1R-208ENST00000541042 MYH14Q7Z406 1995 aaKnown RBP13.49□□□□□ -0.25
C1R-208ENST00000541042 EIF4A1P60842 406 aaKnown RBP13.49□□□□□ -0.25
C1R-208ENST00000541042 LMOD3Q0VAK6 560 aa13.49□□□□□ -0.25
C1R-208ENST00000541042 TRAPPC3LQ5T215 181 aa13.49□□□□□ -0.25
C1R-208ENST00000541042 DIEXFQ68CQ4 756 aaKnown RBP13.49□□□□□ -0.25
C1R-208ENST00000541042 FAM9BQ8IZU0 186 aa13.49□□□□□ -0.25
C1R-208ENST00000541042 CCDC87Q9NVE4 849 aa13.49□□□□□ -0.25
C1R-208ENST00000541042 CHL1O00533 1208 aa13.48□□□□□ -0.25
C1R-208ENST00000541042 A1BGP04217 495 aa13.48□□□□□ -0.25
C1R-208ENST00000541042 ZBTB1Q9Y2K1 713 aa13.48□□□□□ -0.25
C1R-208ENST00000541042 GIGYF1O75420 1035 aaPredicted RBP13.47□□□□□ -0.25
C1R-208ENST00000541042 STARD3NLO95772 234 aa13.47□□□□□ -0.25
C1R-208ENST00000541042 SNRPA1P09661 255 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms