RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 VPS53Q5VIR6 699 aa11.54□□□□□ -0.56
TTC39C-203ENST00000540918 ARHGEF5Q12774 1597 aa11.53□□□□□ -0.56
TTC39C-203ENST00000540918 RNF20Q5VTR2 975 aa11.53□□□□□ -0.56
TTC39C-203ENST00000540918 ANKRD13DQ6ZTN6 518 aa11.53□□□□□ -0.56
TTC39C-203ENST00000540918 RALYLQ86SE5 291 aaKnown RBP11.53□□□□□ -0.56
TTC39C-203ENST00000540918 KLHDC4Q8TBB5 520 aa11.53□□□□□ -0.56
TTC39C-203ENST00000540918 IP6K1Q92551 441 aa11.53□□□□□ -0.56
TTC39C-203ENST00000540918 SLAIN2Q9P270 581 aa11.53□□□□□ -0.56
TTC39C-203ENST00000540918 SEC24BO95487 1268 aa11.52□□□□□ -0.56
TTC39C-203ENST00000540918 SLC4A8Q2Y0W8 1093 aa11.52□□□□□ -0.56
TTC39C-203ENST00000540918 METTL24Q5JXM2 366 aa11.52□□□□□ -0.56
TTC39C-203ENST00000540918 GCC2Q8IWJ2 1684 aa11.52□□□□□ -0.57
TTC39C-203ENST00000540918 CLSTN1O94985 981 aa11.52□□□□□ -0.57
TTC39C-203ENST00000540918 CHAF1AQ13111 956 aaPredicted RBP11.52□□□□□ -0.57
TTC39C-203ENST00000540918 OTUD7AQ8TE49 926 aaPredicted RBP11.52□□□□□ -0.57
TTC39C-203ENST00000540918 CCDC158Q5M9N0 1113 aa11.52□□□□□ -0.57
TTC39C-203ENST00000540918 FAM182BQ5T319 152 aa11.52□□□□□ -0.57
TTC39C-203ENST00000540918 CCDC24Q8N4L8 307 aa11.52□□□□□ -0.57
TTC39C-203ENST00000540918 MPNDQ8N594 471 aa11.51□□□□□ -0.57
TTC39C-203ENST00000540918 RNF214Q8ND24 703 aa11.51□□□□□ -0.57
TTC39C-203ENST00000540918 PIBF1Q8WXW3 757 aa11.51□□□□□ -0.57
TTC39C-203ENST00000540918 CDC42BPAQ5VT25 1732 aa11.51□□□□□ -0.57
TTC39C-203ENST00000540918 SNRPA1P09661 255 aaKnown RBP11.51□□□□□ -0.57
TTC39C-203ENST00000540918 GSE1Q14687 1217 aa11.51□□□□□ -0.57
TTC39C-203ENST00000540918 TCEANC2Q96MN5 208 aa11.51□□□□□ -0.57
TTC39C-203ENST00000540918 AKAP4Q5JQC9 854 aa11.5□□□□□ -0.57
TTC39C-203ENST00000540918 KIF1BPQ96EK5 621 aa11.5□□□□□ -0.57
TTC39C-203ENST00000540918 A1BGP04217 495 aa11.5□□□□□ -0.57
TTC39C-203ENST00000540918 HELBQ8NG08 1087 aaPredicted RBP11.5□□□□□ -0.57
TTC39C-203ENST00000540918 HYPKQ9NX55 129 aa11.5□□□□□ -0.57
TTC39C-203ENST00000540918 PIK3C2GO75747 1445 aa11.5□□□□□ -0.57
TTC39C-203ENST00000540918 PREX2Q70Z35 1606 aa11.5□□□□□ -0.57
TTC39C-203ENST00000540918 FIBPO43427 364 aa11.5□□□□□ -0.57
TTC39C-203ENST00000540918 SYNE3Q6ZMZ3 975 aa11.5□□□□□ -0.57
TTC39C-203ENST00000540918 JAKMIP1Q96N16 626 aaKnown RBP11.5□□□□□ -0.57
TTC39C-203ENST00000540918 ANO8Q9HCE9 1232 aaPredicted RBP11.5□□□□□ -0.57
TTC39C-203ENST00000540918 ERVK-7P63135 1459 aa11.49□□□□□ -0.57
TTC39C-203ENST00000540918 MLH3Q9UHC1 1453 aa11.49□□□□□ -0.57
TTC39C-203ENST00000540918 AKAP17AQ02040 695 aaKnown RBP11.49□□□□□ -0.57
TTC39C-203ENST00000540918 PRPF40BQ6NWY9 871 aaKnown RBP11.49□□□□□ -0.57
TTC39C-203ENST00000540918 TBC1D9Q6ZT07 1266 aa11.49□□□□□ -0.57
TTC39C-203ENST00000540918 LMTK3Q96Q04 1460 aa11.49□□□□□ -0.57
TTC39C-203ENST00000540918 PLEKHG3A1L390 1219 aa11.49□□□□□ -0.57
TTC39C-203ENST00000540918 LMBR1LQ6UX01 489 aa11.49□□□□□ -0.57
TTC39C-203ENST00000540918 ERC1Q8IUD2 1116 aa11.49□□□□□ -0.57
TTC39C-203ENST00000540918 TOM1O60784 492 aa11.49□□□□□ -0.57
TTC39C-203ENST00000540918 PRPF40AO75400 957 aaKnown RBP11.49□□□□□ -0.57
TTC39C-203ENST00000540918 IL2RBP14784 551 aa11.49□□□□□ -0.57
TTC39C-203ENST00000540918 DDB1Q16531 1140 aa11.49□□□□□ -0.57
TTC39C-203ENST00000540918 FERMT3Q86UX7 667 aa11.49□□□□□ -0.57
TTC39C-203ENST00000540918 IL17REQ8NFR9 667 aa11.49□□□□□ -0.57
TTC39C-203ENST00000540918 NOL10Q9BSC4 688 aaKnown RBP11.49□□□□□ -0.57
TTC39C-203ENST00000540918 RNMTO43148 476 aaKnown RBP11.48□□□□□ -0.57
TTC39C-203ENST00000540918 NCBP3Q53F19 620 aaKnown RBP11.48□□□□□ -0.57
TTC39C-203ENST00000540918 RAB11FIP4Q86YS3 637 aa11.48□□□□□ -0.57
TTC39C-203ENST00000540918 CCDC82Q8N4S0 544 aa11.48□□□□□ -0.57
TTC39C-203ENST00000540918 BICD2Q8TD16 824 aa11.48□□□□□ -0.57
TTC39C-203ENST00000540918 DDX11Q96FC9 970 aa11.48□□□□□ -0.57
TTC39C-203ENST00000540918 PUS7Q96PZ0 661 aaKnown RBP11.48□□□□□ -0.57
TTC39C-203ENST00000540918 EIF2AK4Q9P2K8 1649 aaKnown RBP11.48□□□□□ -0.57
TTC39C-203ENST00000540918 ATP6V1AP38606 617 aa11.48□□□□□ -0.57
TTC39C-203ENST00000540918 KCNQ4P56696 695 aa11.48□□□□□ -0.57
TTC39C-203ENST00000540918 LRRFIP1Q32MZ4 808 aaKnown RBP11.48□□□□□ -0.57
TTC39C-203ENST00000540918 L1TD1Q5T7N2 865 aaKnown RBP11.48□□□□□ -0.57
TTC39C-203ENST00000540918 LDHAL6AQ6ZMR3 332 aa11.48□□□□□ -0.57
TTC39C-203ENST00000540918 DDX46Q7L014 1031 aaKnown RBP11.48□□□□□ -0.57
TTC39C-203ENST00000540918 ZNF335Q9H4Z2 1342 aaPredicted RBP11.48□□□□□ -0.57
TTC39C-203ENST00000540918 IFIT5Q13325 482 aaKnown RBP11.48□□□□□ -0.57
TTC39C-203ENST00000540918 TMEM94Q12767 1356 aa11.48□□□□□ -0.57
TTC39C-203ENST00000540918 IL16Q14005 1332 aa11.47□□□□□ -0.57
TTC39C-203ENST00000540918 ATP2B2Q01814 1243 aa11.47□□□□□ -0.57
TTC39C-203ENST00000540918 RAI14Q9P0K7 980 aa11.47□□□□□ -0.57
TTC39C-203ENST00000540918 LRP2BPQ9P2M1 347 aa11.47□□□□□ -0.57
TTC39C-203ENST00000540918 NDUFB9Q9Y6M9 179 aa11.47□□□□□ -0.57
TTC39C-203ENST00000540918 PRAMEF22A3QJZ6 481 aa11.47□□□□□ -0.57
TTC39C-203ENST00000540918 MARCH6O60337 910 aa11.47□□□□□ -0.57
TTC39C-203ENST00000540918 ADGBQ8N7X0 1667 aa11.47□□□□□ -0.57
TTC39C-203ENST00000540918 GOLIM4O00461 696 aa11.47□□□□□ -0.57
TTC39C-203ENST00000540918 ZPR1O75312 459 aa11.47□□□□□ -0.57
TTC39C-203ENST00000540918 CDK11BP21127 795 aaKnown RBP11.47□□□□□ -0.57
TTC39C-203ENST00000540918 HSP90AB3PQ58FF7 597 aa11.47□□□□□ -0.57
TTC39C-203ENST00000540918 ZNF496Q96IT1 587 aaPredicted RBP11.47□□□□□ -0.57
TTC39C-203ENST00000540918 BCL11BQ9C0K0 894 aaPredicted RBP11.47□□□□□ -0.57
TTC39C-203ENST00000540918 PTPRCP08575 1304 aa11.47□□□□□ -0.57
TTC39C-203ENST00000540918 CASTP20810 708 aaKnown RBP11.46□□□□□ -0.57
TTC39C-203ENST00000540918 MSNP26038 577 aaKnown RBP11.46□□□□□ -0.57
TTC39C-203ENST00000540918 ZBTB40Q9NUA8 1239 aa11.46□□□□□ -0.57
TTC39C-203ENST00000540918 NBPF7P0C2Y1 421 aaPredicted RBP11.46□□□□□ -0.57
TTC39C-203ENST00000540918 RHPN1Q8TCX5 695 aa11.46□□□□□ -0.57
TTC39C-203ENST00000540918 JAG2Q9Y219 1238 aa11.46□□□□□ -0.57
TTC39C-203ENST00000540918 EDC4Q6P2E9 1401 aaKnown RBP11.46□□□□□ -0.57
TTC39C-203ENST00000540918 DDX11L8A8MPP1 907 aa11.46□□□□□ -0.58
TTC39C-203ENST00000540918 IFIT1P09914 478 aaKnown RBP11.46□□□□□ -0.58
TTC39C-203ENST00000540918 SDSP20132 328 aa11.46□□□□□ -0.58
TTC39C-203ENST00000540918 HAND2P61296 217 aa11.46□□□□□ -0.58
TTC39C-203ENST00000540918 FAM98CQ17RN3 349 aaKnown RBP11.46□□□□□ -0.58
TTC39C-203ENST00000540918 CAVIN1Q6NZI2 390 aaKnown RBP11.46□□□□□ -0.58
TTC39C-203ENST00000540918 SIRT1Q96EB6 747 aa11.46□□□□□ -0.58
TTC39C-203ENST00000540918 FAM89AQ96GI7 184 aa11.46□□□□□ -0.58
TTC39C-203ENST00000540918 PRIM1P49642 420 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms